Gene ECD_00560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_00560 
SymbolentC 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp585372 
End bp586547 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content56% 
IMG OID 
Productisochorismate synthase 
Protein accessionACT42439 
Protein GI253976769 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACGT CACTGGCTGA GGAAGTACAG CAGACCATGG CAACACTTGC GCCCAATCGC 
TTTTTCTTTA TGTCGCCGTA CCGCAGTTTT ACGACGTCAG GATGTTTCGC CCGCTTCGAT
GAACCGGCTG TGAACGGGGA TTCGCCCGAC AGTCCCTTCC AGCAAAAACT CGCCGCGCTG
TTTGCCGATG CCAAAGCGCA GAGCATCAAA AATCCGGTGA TAGTCGGGGC GATTCCCTTC
GATCCACGTC AGCCTTCGTC GCTGTATATT CCCGAATCCT GGCAGTCGTT CTCCCGCCAG
GAAAAACAGA CCTCAGCCCG CCGTTTTACC CGCAGCCAGT CGCTGAACGT GGTGGAACGC
CAGGCAATTC CTGAACAAAC CACGTTTGAA CAGATGGTTG CTCGCGCTGC CGAACTTACC
GCCACGCCGC AGGTCGACAA AGTGGTGTTG TCACGGTTGA TTGATATCAC CACTGACGCC
GCCATTGATA GTGGCGTATT GCTGGAACGG TTGATTGCGC AAAACCCGGT TAGTTACAAC
TTCCATGTCC CGCTGGCTGA TGGTGGCGTC CTGCTGGGGG CCAGCCCGGA ACTGCTGCTA
CGTAAAGACG GCGAGCGTTT TAGCTCCATT CCGTTAGCCG GTTCCGCGCG TCGTCAGCCG
GATGAAGTGC TCGATCGCGA AGCGGGTAAT CGTCTGCTGG CGTCAGAAAA AGATCGCCAT
GAACATGAAC TGGTGACTCA GGCGATGAAA GAGGTACTGC GCGAACGCAG TAGTGAGTTA
CACGTTCCCT CCTCTCCACA ATTGATTACC ACGCCGACGC TGTGGCATCT CGCAACTCCC
TTTGAAGGTA AAGCGAATTC GCAAGAAAAC GCACTGACTC TGGCCTGTCT GCTGCATCCA
ACCCCCGCGC TGAGCGGTTT CCCGCATCAG GCCGCGACCC AGGTTATTGC TGAACTGGAG
CCATTCGACC GCGAACTGTT TGGCGGCATT GTGGGTTGGT GTGACAGCGA AGGTAACGGC
GAATGGGTGG TGACCATCCG CTGCGCGAAG CTGCGGGAAA ATCAGGTGCG TCTGTTTGCC
GGAGCGGGGA TTGTGCCTGC GTCGTCACCG TTGGGTGAGT GGCGCGAAAC AGGCGTCAAA
CTTTCTACCA TGTTGAACGT TTTTGGATTG CATTAA
 
Protein sequence
MDTSLAEEVQ QTMATLAPNR FFFMSPYRSF TTSGCFARFD EPAVNGDSPD SPFQQKLAAL 
FADAKAQSIK NPVIVGAIPF DPRQPSSLYI PESWQSFSRQ EKQTSARRFT RSQSLNVVER
QAIPEQTTFE QMVARAAELT ATPQVDKVVL SRLIDITTDA AIDSGVLLER LIAQNPVSYN
FHVPLADGGV LLGASPELLL RKDGERFSSI PLAGSARRQP DEVLDREAGN RLLASEKDRH
EHELVTQAMK EVLRERSSEL HVPSSPQLIT TPTLWHLATP FEGKANSQEN ALTLACLLHP
TPALSGFPHQ AATQVIAELE PFDRELFGGI VGWCDSEGNG EWVVTIRCAK LRENQVRLFA
GAGIVPASSP LGEWRETGVK LSTMLNVFGL H