Gene ECD_00554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_00554 
SymbolfepE 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp578741 
End bp579874 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content45% 
IMG OID 
Productregulator of length of O-antigen component of lipopolysaccharide chains 
Protein accessionACT42433 
Protein GI253976763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.60022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCAC TGAATATTAA ACAGGGAAGT GACGCTCATT TTCCCGATTA TCCTCTGGCG 
TCGCCCAGTA ATAATGAAAT TGATTTACTT AATCTAATCT CAGTTTTATG GCGGGCCAAA
AAAACGGTCA TGGCGGTCGT TTTTGCGTTT GCCTGCGCAG GCTTGCTGAT CTCTTTCATC
CTGCCGCAAA AATGGACCAG CGCGGCGGTT GTCACGCCTC CAGAACCTGT TCAGTGGCAA
GAGTTGGAGA AAACATTCAC TAAGCTTCGT GTGCTGGATC TGGATATCAA AATTGATCGT
ACAGAAGCAT TTAACCTGTT TATCAAGAAG TTTCAGTCGG TTAGCTTGCT GGAAGAGTAC
CTGCGTTCAT CACCTTATGT GATGGACCAA TTAAAAGAGG CGAAAATCGA CGAACTGGAT
TTGCATCGCG CAATTGTCGC ATTGAGCGAA AAAATGAAAG CGGTTGATGA CAATGCCAGT
AAGAAAAAAG ATGAACCGTC ACTGTATACC TCCTGGACGC TAAGTTTTAC CGCGCCAACC
AGTGAAGAGG CGCAGACCGT TTTGAGCGGG TATATCGATT ATATCTCTAC GTTGGTGGTG
AAAGAGTCGC TAGAAAACGT CCGTAATAAA CTGGAGATCA AAACCCAGTT TGAAAAAGAA
AAACTGGCTC AGGATCGCAT TAAAACGAAA AATCAACTTG ATGCAAACAT TCAGCGCCTC
AATTATTCAC TCGACATTGC CAACGCGGCA GGAATTAAAA AGCCCGTTTA CAGTAATGGT
CAGGCCGTTA AAGATGACCC CGATTTCTCT ATTTCTCTCG GCGCAGACGG TATTGAACGC
AAACTGGAAA TTGAAAAAGC GGTCACTGAC GTTGCAGAAC TGAACGGTGA ATTACGTAAT
CGTCAGTATC TTGTTGAGCA GTTAACAAAA GCAAATATCA ACGATGTGAA TTTTACGCCG
TTTAAATATC AGTTAAGCCC GTCATTGCCA GTGAAAAAAG ACGGTCCGGG TAAGGCGATT
ATTGTGATCC TTTCCGCGCT GATCGGCGGG ATGGTGGCTT GTGGTAGCGT GTTATTGCGC
TATGCGATGG CATCCAGAAA GCAGGATGCC ATGATGGCAG ACCACTTAGT TTAA
 
Protein sequence
MSSLNIKQGS DAHFPDYPLA SPSNNEIDLL NLISVLWRAK KTVMAVVFAF ACAGLLISFI 
LPQKWTSAAV VTPPEPVQWQ ELEKTFTKLR VLDLDIKIDR TEAFNLFIKK FQSVSLLEEY
LRSSPYVMDQ LKEAKIDELD LHRAIVALSE KMKAVDDNAS KKKDEPSLYT SWTLSFTAPT
SEEAQTVLSG YIDYISTLVV KESLENVRNK LEIKTQFEKE KLAQDRIKTK NQLDANIQRL
NYSLDIANAA GIKKPVYSNG QAVKDDPDFS ISLGADGIER KLEIEKAVTD VAELNGELRN
RQYLVEQLTK ANINDVNFTP FKYQLSPSLP VKKDGPGKAI IVILSALIGG MVACGSVLLR
YAMASRKQDA MMADHLV