Gene ECD_00481 details

Gene Information

• Locus tag: ECD_00481
• Symbol: sfmC
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21(DE3)
• Kingdom: Bacteria
• Replicon accession: CP001509
• Strand: +
• Start bp: 528061
• End bp: 528753
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 43%
• Product: pilin chaperone, periplasmic
• Protein accession: ACT42380
• Protein GI: 253976710

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGACTA AAATAAAGTT ATTGATGCTC ATTATATTTT ATTTAATCAT TTCGGCCAGC 
GCCCATGCTG CCGGAGGGAT CGCATTAGGT GCCACGCGTA TTATTTATCC CGCTGATGCT 
AAACAGACTG CGGTATGGAT TAGAAATAGC CATACCAATG AGCGCTTTCT GGTCAATTCG 
TGGATTGAAA ACAGCAGCGG TGTAAAAGAA AAGTCATTCA TCATTACACC GCCACTGTTT 
GTTAGTGAAC CCAAAAGCGA AAATACTTTG CGTATTATTT ACACCGGTCC ACCGCTGGCA 
GCAGATCGTG AGTCTCTGTT CTGGATGAAT GTTAAGACGA TCCCTTCGGT AGATAAAAAT 
GCATTGAACG GCAGGAATGT TTTGCAACTG GCGATTTTAT CGCGCATGAA ATTATTTCTC 
CGTCCAATTC AATTACAAGA ATTACCCGCA GAAGCGCCGG ACACACTCAA GTTTTCGCGA 
TCCGGTAACT ATATCAATGT TCATAATCCA TCACCTTTTT ATGTCACCCT GGTTAACTTA 
CAAGTGGGCA GCCAAAAGTT GGGGAATGCT ATGGCTGCAC CCAGAGTTAA TTCACAAATT 
CCCTTACCCT CAGGAGTGCA GGGAAAGCTG AAATTTCAGA CCGTTAATGA TTATGGTTCA 
GTAACTCCGG TCAGAGAAGT GAACTTAAAC TAA 

 

Protein sequence

MMTKIKLLML IIFYLIISAS AHAAGGIALG ATRIIYPADA KQTAVWIRNS HTNERFLVNS 
WIENSSGVKE KSFIITPPLF VSEPKSENTL RIIYTGPPLA ADRESLFWMN VKTIPSVDKN 
ALNGRNVLQL AILSRMKLFL RPIQLQELPA EAPDTLKFSR SGNYINVHNP SPFYVTLVNL 
QVGSQKLGNA MAAPRVNSQI PLPSGVQGKL KFQTVNDYGS VTPVREVNLN