Gene ECD_00480 details

Gene Information

• Locus tag: ECD_00480
• Symbol: sfmA
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21(DE3)
• Kingdom: Bacteria
• Replicon accession: CP001509
• Strand: +
• Start bp: 527299
• End bp: 527841
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 45%
• Product: predicted fimbrial-like adhesin protein
• Protein accession: ACT42379
• Protein GI: 253976709

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTAA GATTTATTTC GTCTGCGCTG GCTGCCGCAC TATTCGCCGC TACGGGTAGT 
TATGCTGCCG TTGTAGATGG CGGTACAATT CACTTTGAAG GCGAACTGGT GAATGCTGCC 
TGTTCAGTGA ATACTGACTC GGCAGACCAG GTTGTCACAC TCGGTCAATA TCGTACCGAT 
ATTTTCAATG CTGTTGGTAA TACCTCTGCA TTAATTCCAT TCACCATTCA GTTGAACGAC 
TGCGATCCTG TTGTTGCCGC TAATGCTGCC GTTGCATTTT CTGGTCAGGC TGATGCAATC 
AATGATAATT TATTGGCCAT TGCATCCAGT ACCAATACAA CAACAGCAAC GGGTGTCGGT 
ATTGAAATAC TTGATAATAC ATCCGCAATT CTCAAACCTG ATGGGAATAG CTTCTCAACC 
AACCAGAACT TGATCCCCGG GACCAACGTT CTTCATTTTT CTGCACGTTA TAAAGGCACC 
GGTACAAGTG CATCAGCAGG GCAAGCAAAT GCTGACGCGA CTTTTATTAT GAGATATGAA 
TAA 

 

Protein sequence

MKLRFISSAL AAALFAATGS YAAVVDGGTI HFEGELVNAA CSVNTDSADQ VVTLGQYRTD 
IFNAVGNTSA LIPFTIQLND CDPVVAANAA VAFSGQADAI NDNLLAIASS TNTTTATGVG 
IEILDNTSAI LKPDGNSFST NQNLIPGTNV LHFSARYKGT GTSASAGQAN ADATFIMRYE