Gene ECD_00356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_00356 
SymbolsecD 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp393049 
End bp394896 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content53% 
IMG OID 
Productprotein export protein SecD 
Protein accessionACT42255 
Protein GI253976585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.698554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAAACC GTTATCCTTT GTGGAAGTAC GTCATGCTGA TCGTGGTGAT TGTCATCGGT 
CTGCTGTATG CGCTTCCCAA CCTGTTTGGT GAGGATCCGG CTGTTCAGAT CACTGGTGCG
CGCGGAGTCG CCGCCAGTGA GCAAACGCTG ATCCAGGTCC AGAAAACGTT ACAAGAAGAA
AAAATAACTG CTAAGTCTGT GGCACTGGAA GAGGGCGCTA TTCTTGCGCG CTTCGACTCC
ACTGACACCC AGTTGCGCGC TCGTGAAGCA TTAATGGGCG TTATGGGTGA CAAATACGTC
GTGGCGCTTA ACCTTGCCCC GGCAACGCCG CGCTGGCTGG CAGCTATTCA CGCTGAGCCG
ATGAAGCTCG GCCTTGACCT GCGTGGCGGC GTTCACTTCC TGATGGAAGT GGATATGGAC
ACCGCGCTTG GCAAACTCCA GGAACAAAAT ATCGATAGCC TACGCAGTGA CCTGCGCGAA
AAGGGCATCC CGTATACCAC TGTTCGTAAA GAAAACAACT ACGGCCTGAG CATCACTTTC
CGCGATGCTA AAGCTCGTGA TGAAGCCATT GCGTATCTGA GCAAGCGCCA TCCGGACCTG
GTGATTAGCA GCCAGGGCAG CAACCAGCTG CGTGCGGTAA TGAGCGATGC TCGTCTGAGT
GAAGCGCGTG AATATGCGGT GCAGCAGAAC ATTAATATCC TGCGTAACCG TGTAAACCAA
CTTGGCGTGG CGGAGCCGGT GGTTCAGCGT CAGGGTGCTG ACCGTATCGT TGTTGAACTG
CCAGGTATTC AGGACACTGC GCGTGCGAAA GAGATTCTGG GTGCGACGGC AACGCTGGAA
TTCCGTCTGG TAAACACCAA CGTTGACCAG GCCGCTGCGG CATCCGGTCG CGTACCGGGC
GACTCTGAAG TGAAACAGAC CCGCGAAGGT CAGCCAGTTG TGCTGTACAA ACGCGTAATT
CTGACCGGTG ACCATATCAC CGACTCCACT TCCAGCCAGG ACGAATACAA CCAACCGCAG
GTTAACATCT CGCTCGATAG CGCTGGTGGT AACATCATGT CTAACTTCAC TAAGGACAAC
ATCGGCAAAC CGATGGCAAC CCTGTTTGTG GAGTACAAAG ACAGCGGTAA GAAAGATGCA
AATGGTCGTG CGGTTCTGGT GAAACAGGAA GAGGTGATTA ACATCGCCAA CATCCAGTCT
CGTCTGGGTA ACAGCTTCCG TATCACCGGC ATCAACAACC CGAACGAAGC CCGTCAGCTG
TCACTGCTGC TGCGTGCCGG TGCGTTGATC GCGCCGATTC AGATTGTTGA AGAACGTACC
ATTGGCCCAA CCCTGGGTAT GCAGAACATT GAACAGGGGC TGGAGGCTTG CCTTGCCGGT
CTGCTGGTTT CTATTCTGTT CATGATCATC TTCTATAAGA AGTTTGGTCT GATTGCGACC
AGTGCTCTGA TTGCCAACTT GATCTTAATC GTCGGCATTA TGTCGCTGTT GCCAGGCGCA
ACGCTGAGTA TGCCAGGTAT CGCGGGTATC GTCTTAACCC TTGCGGTGGC GGTCGATGCG
AACGTACTGA TCAACGAACG TATTAAAGAA GAGTTGAGCA ACGGACGTAC TGTTCAACAG
GCAATTGATG AAGGTTATCG TGGCGCATTC AGTTCTATCT TCGATGCGAA CATCACCACG
CTGATTAAAG TCATCATCCT GTACGCAGTG GGTACCGGGG CAATTAAAGG GTTCGCGATT
ACTACCGGTA TCGGTGTGGC GACGTCGATG TTTACCGCGA TTGTCGGTAC GCGTGCCATC
GTAAACCTGC TATATGGCGG CAAGCGCGTC AAGAAGCTGT CAATCTGA
 
Protein sequence
MLNRYPLWKY VMLIVVIVIG LLYALPNLFG EDPAVQITGA RGVAASEQTL IQVQKTLQEE 
KITAKSVALE EGAILARFDS TDTQLRAREA LMGVMGDKYV VALNLAPATP RWLAAIHAEP
MKLGLDLRGG VHFLMEVDMD TALGKLQEQN IDSLRSDLRE KGIPYTTVRK ENNYGLSITF
RDAKARDEAI AYLSKRHPDL VISSQGSNQL RAVMSDARLS EAREYAVQQN INILRNRVNQ
LGVAEPVVQR QGADRIVVEL PGIQDTARAK EILGATATLE FRLVNTNVDQ AAAASGRVPG
DSEVKQTREG QPVVLYKRVI LTGDHITDST SSQDEYNQPQ VNISLDSAGG NIMSNFTKDN
IGKPMATLFV EYKDSGKKDA NGRAVLVKQE EVINIANIQS RLGNSFRITG INNPNEARQL
SLLLRAGALI APIQIVEERT IGPTLGMQNI EQGLEACLAG LLVSILFMII FYKKFGLIAT
SALIANLILI VGIMSLLPGA TLSMPGIAGI VLTLAVAVDA NVLINERIKE ELSNGRTVQQ
AIDEGYRGAF SSIFDANITT LIKVIILYAV GTGAIKGFAI TTGIGVATSM FTAIVGTRAI
VNLLYGGKRV KKLSI