| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_00287 |
|---|
| Symbol | prpC |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | + |
|---|
| Start bp | 319641 |
|---|
| End bp | 320810 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | 2-methylcitrate synthase |
|---|
| Protein accession | ACT42186 |
|---|
| Protein GI | 253976516 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA CAACGATCCT GCAAAACAGT ACCCATGTCA TTAAACCGAA AAAATCTGTG
GCACTTTCTG GCGTTCCGGC GGGCAATACG GCGCTCTGCA CCGTGGGTAA AAGCGGCAAT
GACCTGCATT ACCGCGGCTA CGATATTCTT GATCTGGCGG AACATTGCGA ATTTGAAGAA
GTGGCGCATC TGCTGATCCA CGGCAAACTG CCGACCCGTG ACGAACTCGC CGCTTACAAA
ACGAAACTGA AAGCCCTGCG CGGTTTACCG GCTAACGTGC GTACCGTGCT GGAAGCCTTA
CCGGCGGCGT CACACCCGAT GGATGTTATG CGCACCGGCG TTTCCGCGCT CGGCTGCACG
CTGCCAGAAA AAGAGGGACA TACCGTCTCT GGCGCGCGGG ATATTGCCGA CAAACTGCTG
GCGTCGCTTA GCTCGATTCT CCTTTATTGG TATCACTACA GCCACAACGG CGAACGCATC
CAGCCGGAAA CCGATGACGA CTCCATCGGC GGTCACTTCC TGCATCTGCT GCACGGCGAA
AAGCCATCGC AAAGCTGGGA AAAGGCGATG CATATCTCGC TGGTGCTGTA CGCCGAACAC
GAGTTTAACG CCTCCACCTT TACCAGTCGG GTGATTGCGG GTACTGGCTC TGATATGTAT
TCCGCGATTA TTGGCGCGAT TGGCGCACTG CGCGGGCCGA AACACGGCGG GGCGAATGAA
GTGTCGCTGG AGATCCAGCA ACGCTACGAA ACGCCGGACG AAGCCGAAGC CGATATCCGC
AAGCGGGTGG AAAACAAAGA AGTAGTCATT GGTTTTGGTC ATCCGGTTTA TACCATCGCC
GACCCGCGTC ATCAGGTGAT CAAACGCGTG GCGAAGCAGC TCTCGCAGGA AGGCGGCTCG
CTGAAGATGT ACAACATCGC CGATCGCCTG GAAACGGTGA TGTGGGAGAG CAAAAAGATG
TTCCCCAATC TCGACTGGTT CTCTGCTGTT TCCTACAACA TGATGGGCGT TCCCACCGAG
ATGTTCACAC CACTGTTTGT TATCGCCCGC GTCACCGGCT GGGCGGCGCA CATTATCGAA
CAACGTCAGG ACAACAAAAT TATCCGTCCT TCCGCCAATT ATGTTGGACC GGAAGACCGC
CCGTTTGTCG CGCTGGATAA GCGCCAGTAA
|
|---|
| Protein sequence | MSDTTILQNS THVIKPKKSV ALSGVPAGNT ALCTVGKSGN DLHYRGYDIL DLAEHCEFEE
VAHLLIHGKL PTRDELAAYK TKLKALRGLP ANVRTVLEAL PAASHPMDVM RTGVSALGCT
LPEKEGHTVS GARDIADKLL ASLSSILLYW YHYSHNGERI QPETDDDSIG GHFLHLLHGE
KPSQSWEKAM HISLVLYAEH EFNASTFTSR VIAGTGSDMY SAIIGAIGAL RGPKHGGANE
VSLEIQQRYE TPDEAEADIR KRVENKEVVI GFGHPVYTIA DPRHQVIKRV AKQLSQEGGS
LKMYNIADRL ETVMWESKKM FPNLDWFSAV SYNMMGVPTE MFTPLFVIAR VTGWAAHIIE
QRQDNKIIRP SANYVGPEDR PFVALDKRQ
|
|---|
| |