| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_00201 |
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| Symbol | yafC |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21(DE3) |
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| Kingdom | Bacteria |
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| Replicon accession | CP001509 |
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| Strand | - |
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| Start bp | 232894 |
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| End bp | 233808 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted DNA-binding transcriptional regulator |
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| Protein accession | ACT42102 |
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| Protein GI | 253976432 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0488817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGCCA CGTCGGAAGA ACTCGCCATT TTTGTTTCGG TCGTCGAAAG CGGCAGCTTT
AGCCGGGCAG CGGAACAATT AGGGCAAGCA AACTCAGCGG TAAGCCGGGC GGTGAAAAAG
CTGGAGATGA AACTTGGCGT TAGCCTGCTT AATCGGACCA CGCGACAACT TAGCCTGACG
GAAGAAGGCG AGCGTTATTT TCGTCGCGTA CAGTCAATTT TGCAGGAGAT GGCAGCGGCA
GAATCAGAAA TTATGGAGAC GCGTAATACA CCGCGTGGAC TGTTACGGAT CGATGCCGCA
ACTCCAGTGG TGCTGCACTT TCTGATGCCG TTAATTAAGC CTTTCCGTGA ACGCTATCCG
GAAGTCACTT TGTCGCTAGT CTCCTCCGAA ACGATTATTA ATTTGATCGA AAGAAAAGTG
GATGTCGCGA TACGCGCTGG TACGTTAACG GATTCCAGCT TACGTGCCAG GCCGTTATTT
AACAGTTATC GAAAAATTAT CGCCTCCCCC GATTATATTT CCCGCTACGG GAAGCCAGAA
ACGATCGACG ATTTAAAGCA ACATGTTTGC CTGGGATTCA CTGAACCCGC TTCCCTCAAT
ACCTGGCCGA TAGCCTGTAG TGATGGACAA TTACATGAGG TGAAGTACGG TTTGTCATCC
AATAGTGGGG AAACACTGAA ACAGCTTTGC CTGAGTGGCA ACGGGATTGC GTGTTTGTCC
GACTACATGA TCGACAAAGA AATCGCTCGC GGAGAATTGG TGGAGTTAAT GGCAGATAAA
GTGTTGCCAG TGGAAATGCC ATTCAGTGCC GTCTATTACA GCGACCGTGC GGTAAGTACG
CGCATCCGGG CTTTTATCGA TTTCCTTAGC GAGCATGTAA AAACAGCTCC CGGAGGAGCT
GTCAGAGAGG CTTAA
|
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| Protein sequence | MKATSEELAI FVSVVESGSF SRAAEQLGQA NSAVSRAVKK LEMKLGVSLL NRTTRQLSLT
EEGERYFRRV QSILQEMAAA ESEIMETRNT PRGLLRIDAA TPVVLHFLMP LIKPFRERYP
EVTLSLVSSE TIINLIERKV DVAIRAGTLT DSSLRARPLF NSYRKIIASP DYISRYGKPE
TIDDLKQHVC LGFTEPASLN TWPIACSDGQ LHEVKYGLSS NSGETLKQLC LSGNGIACLS
DYMIDKEIAR GELVELMADK VLPVEMPFSA VYYSDRAVST RIRAFIDFLS EHVKTAPGGA
VREA
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