Gene ECD_00182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_00182 
SymboldnaE 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp207969 
End bp211451 
Gene Length3483 bp 
Protein Length1160 aa 
Translation table11 
GC content55% 
IMG OID 
ProductDNA polymerase III subunit alpha 
Protein accessionACT42083 
Protein GI253976413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.480953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAC CACGTTTCGT ACACCTGCGG GTGCACAGCG ACTACTCGAT GATCGATGGC 
CTGGCCAAAA CCGCACCGCT GGTAAAAAAG GCGGCGGCGT TGGGTATGCC AGCACTGGCG
ATCACCGATT TCACCAACCT TTGCGGTCTG GTGAAGTTCT ACGGAGCGGG ACATGGCGCA
GGGATTAAGC CTATCGTCGG GGCAGATTTT AATGTCCAGT GCGACCTGCT GGGTGATGAG
TTAACCCACC TGACGGTACT GGCGGCGAAC AATACCGGCT ATCAGAATCT GACGTTGCTG
ATCTCAAAAG CGTATCAGCG CGGGTACGGT GCCGCCGGGC CGATCATCGA TCGCGACTGG
CTTATCGAAT TAAACGAAGG GTTGATCCTT CTTTCCGGCG GGCGCATGGG CGACGTCGGA
CGCAGTCTTT TGCGTGGTAA CAGCGCGCTG GTAGATGAGT GTGTCGCGTT TTATGAAGAA
CACTTCCCGG ATCGCTATTT TCTCGAGCTG ATCCGCACCG GCAGGCCGGA TGAAGAAAGC
TATTTGCACG CGGCGGTGGA ACTGGCGGAA GCGCGCGGTT TGCCCGTCGT GGCGACCAAC
GACGTGCGCT TTATCGACAG CAGCGACTTT GACGCACACG AAATCCGCGT CGCGATCCAC
GACGGCTTTA CCCTCGACGA TCCTAAACGC CCGCGTAACT ATTCGCCGCA GCAATATATG
CGTAGCGAAG AGGAGATGTG CGAGCTGTTT GCCGACATCC CAGAAGCCCT TGCCAACACC
GTTGAGATCG CCAAACGCTG TAACGTAACT GTGCGTCTTG GTGAATACTT CCTGCCGCAG
TTCCCGACCG GGGACATGAG CACCGAAGAT TATCTGGTCA AGCGTGCAAA AGAGGGCCTG
GAAGAGCGTC TGGCCTTTTT ATTCCCTGAC GAGGAAGAAC GTGTTAAGCG CCGCCCGGAA
TATGACGAAC GTCTGGAGAC TGAACTTCAG GTTATCAACC AGATGGGCTT CCCGGGCTAC
TTCCTCATCG TTATGGAATT TATCCAGTGG TCGAAAGATA ACGGCGTACC GGTAGGGCCG
GGCCGTGGTT CTGGTGCAGG GTCACTGGTG GCCTACGCGC TGAAAATCAC CGACCTCGAT
CCGCTGGAAT TTGACCTGCT GTTCGAACGT TTCCTTAACC CGGAACGTGT CTCCATGCCT
GACTTCGACG TTGACTTCTG TATGGAGAAA CGCGACCAGG TTATCGAGCA CGTAGCGGAC
ATGTACGGTC GTGATGCGGT ATCGCAGATT ATCACCTTCG GTACGATGGC GGCGAAAGCG
GTGATCCGCG ACGTAGGCCG CGTGCTGGGG CATCCGTACG GCTTTGTCGA CCGTATCTCG
AAACTGATCC CGCCCGATCC TGGCATGACG CTGGCGAAAG CGTTTGAAGC CGAGCCGCAG
CTGCCGGAAA TCTACGAAGC GGATGAAGAA GTTAAGGCGC TGATCGACAT GGCGCGCAAA
CTGGAAGGGG TCACCCGTAA CGCCGGTAAG CACGCCGGTG GGGTGGTTAT CGCGCCGACC
AAAATTACCG ATTTTGCGCC GCTTTATTGC GATGAAGAGG GCAAACATCC GGTCACCCAG
TTTGATAAAA GCGACGTTGA ATACGCCGGA CTGGTGAAGT TCGACTTCCT TGGTTTGCGT
ACGCTCACCA TCATCAACTG GGCGCTGGAG ATGATCAACA AGCGGCGGGC GAAGAATGGC
GAGCCGCCGC TGGATATCGC CGCGATCCCG CTGGATGACA AGAAAAGCTT CGACATGCTG
CAACGCTCGG AAACCACGGC GGTATTCCAG CTTGAATCGC GCGGCATGAA GGACCTGATC
AAGCGTCTGC AACCTGACTG CTTCGAAGAT ATGATCGCAC TGGTGGCACT GTTCCGCCCT
GGTCCGTTGC AATCAGGGAT GGTGGATAAC TTTATCGACC GTAAACATGG TCGCGAAGAG
ATCTCCTATC CGGACGTACA GTGGCAGCAT GAAAGCCTGA AACCGGTACT GGAGCCAACC
TACGGCATCA TCCTGTATCA GGAACAGGTC ATGCAGATTG CGCAGGTGCT TTCTGGTTAT
ACCCTCGGTG GCGCGGATAT GCTGCGTCGT GCGATGGGTA AGAAAAAGCC GGAAGAGATG
GCTAAGCAGC GTTCTGTATT TGCTGAAGGT GCAGAAAAGA ACGGAATCAA CGCCGAACTG
GCGATGAAAA TCTTCGACCT GGTGGAGAAA TTCGCTGGTT ACGGATTTAA CAAATCGCAC
TCTGCGGCCT ATGCTTTGGT GTCATATCAA ACGTTATGGC TGAAAGCGCA CTATCCGGCA
GAGTTTATGG CGGCGGTAAT GACCGCCGAT ATGGACAACA CCGAGAAGGT GGTGGGCCTG
GTGGATGAGT GCTGGCGGAT GGGGCTGAAA ATCCTACCAC CAGATATAAA CTCCGGTCTT
TACCATTTCC ACGTCAACGA CGACGGCGAA ATCGTGTATG GTATTGGCGC GATCAAAGGG
GTCGGTGAAG GTCCGATTGA GGCCATCATC GAAGCCCGTA ATAAAGGCGG CTACTTCCGC
GAACTGTTTG ATCTCTGCGC CCGAACCGAC ACCAAAAAGT TAAACCGGCG GGTGCTGGAA
AAACTGATTA TGTCCGGGGC GTTTGACCGT CTTGGGCCAC ACCGCGCGGC ACTGATGAAC
TCGCTGGGCG ATGCGTTAAA AGCGGCAGAT CAACACGCGA AAGCGGAAGC TATCGGTCAG
GCCGATATGT TCGGCGTGCT GGCCGAAGAG CCGGAACAAA TTGAACAATC CTACGCCAGC
TGCCAACCGT GGCCGGAGCA GGTGGTATTA GATGGGGAAC GTGAAACGTT AGGTCTGTAC
CTGACGGGAC ACCCTATCAA CCAGTATTTA AAAGAGATTG AGCGTTATGT CGGAGGCGTA
AGGCTGAAAG ACATGCACCC GACAGAACGT GGTAAAGTCA TCACGGCTGC GGGGCTCGTT
GTTGCCGCGC GGGTTATGGT CACCAAGCGC GGCAATCGTA TCGGTATCTG CACGCTGGAT
GACCGTTCCG GGCGGCTGGA AGTGATGTTG TTTACTGACG CCCTGGATAA ATACCAGCAA
TTGCTGGAAA AAGACCGCAT ACTTATCGTC AGCGGACAGG TCAGCTTTGA TGACTTCAGC
GGTGGGCTTA AAATGACCGC TCGCGAAGTG ATGGATATTG ACGAAGCCCG GGAAAAATAT
GCTCGCGGGC TTGCTATCTC GCTGACGGAC AGGCAAATTG ATGACCAGCT TTTAAACCGA
CTCCGTCAGT CTCTGGAACC CCACCGCTCT GGGACAATTC CAGTACATCT CTACTATCAG
AGGGCGGATG CACGCGCGCG GTTGCGTTTT GGCGCGACGT GGCGTGTCTC TCCGAGCGAT
CGTTTATTAA ACGATCTCCG TGGCCTCATT GGTTCGGAGC AGGTGGAACT GGAGTTTGAC
TAA
 
Protein sequence
MSEPRFVHLR VHSDYSMIDG LAKTAPLVKK AAALGMPALA ITDFTNLCGL VKFYGAGHGA 
GIKPIVGADF NVQCDLLGDE LTHLTVLAAN NTGYQNLTLL ISKAYQRGYG AAGPIIDRDW
LIELNEGLIL LSGGRMGDVG RSLLRGNSAL VDECVAFYEE HFPDRYFLEL IRTGRPDEES
YLHAAVELAE ARGLPVVATN DVRFIDSSDF DAHEIRVAIH DGFTLDDPKR PRNYSPQQYM
RSEEEMCELF ADIPEALANT VEIAKRCNVT VRLGEYFLPQ FPTGDMSTED YLVKRAKEGL
EERLAFLFPD EEERVKRRPE YDERLETELQ VINQMGFPGY FLIVMEFIQW SKDNGVPVGP
GRGSGAGSLV AYALKITDLD PLEFDLLFER FLNPERVSMP DFDVDFCMEK RDQVIEHVAD
MYGRDAVSQI ITFGTMAAKA VIRDVGRVLG HPYGFVDRIS KLIPPDPGMT LAKAFEAEPQ
LPEIYEADEE VKALIDMARK LEGVTRNAGK HAGGVVIAPT KITDFAPLYC DEEGKHPVTQ
FDKSDVEYAG LVKFDFLGLR TLTIINWALE MINKRRAKNG EPPLDIAAIP LDDKKSFDML
QRSETTAVFQ LESRGMKDLI KRLQPDCFED MIALVALFRP GPLQSGMVDN FIDRKHGREE
ISYPDVQWQH ESLKPVLEPT YGIILYQEQV MQIAQVLSGY TLGGADMLRR AMGKKKPEEM
AKQRSVFAEG AEKNGINAEL AMKIFDLVEK FAGYGFNKSH SAAYALVSYQ TLWLKAHYPA
EFMAAVMTAD MDNTEKVVGL VDECWRMGLK ILPPDINSGL YHFHVNDDGE IVYGIGAIKG
VGEGPIEAII EARNKGGYFR ELFDLCARTD TKKLNRRVLE KLIMSGAFDR LGPHRAALMN
SLGDALKAAD QHAKAEAIGQ ADMFGVLAEE PEQIEQSYAS CQPWPEQVVL DGERETLGLY
LTGHPINQYL KEIERYVGGV RLKDMHPTER GKVITAAGLV VAARVMVTKR GNRIGICTLD
DRSGRLEVML FTDALDKYQQ LLEKDRILIV SGQVSFDDFS GGLKMTAREV MDIDEAREKY
ARGLAISLTD RQIDDQLLNR LRQSLEPHRS GTIPVHLYYQ RADARARLRF GATWRVSPSD
RLLNDLRGLI GSEQVELEFD