| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_00146 |
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| Symbol | ligT |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21(DE3) |
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| Kingdom | Bacteria |
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| Replicon accession | CP001509 |
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| Strand | - |
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| Start bp | 164353 |
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| End bp | 164883 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | 2'-5' RNA ligase |
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| Protein accession | ACT42047 |
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| Protein GI | 253976377 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00154345 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGAAC CGCAACGTCT GTTCTTTGCT ATCGACTTAC CTGCAGAAAT CCGCGAACAG
ATTATCCACT GGCGCGCCAA ACACTTCCCA CCTGAGGCGG GACGTCCGGT CGCCGCCGAT
AATTTGCATC TGACTCTGGC ATTTTTAGGC GAAGTGAGCG CCGAGAAAGA GAAGGCGCTT
TCTCTTTTAG CCGGACGGAT TCGTCAACCT GGTTTCACAC TCACGCTTGA TGACGCCGGA
CAATGGCTGC GTTCGCGTGT GGTGTGGTTA GGGATGCGTC AGCCTCCACG CGGCTTAATC
CAGCTGGCGA ATATGCTCCG TTCACAGGCT GCCCGCAGCG GTTGTTTTCA AAGCAATCGT
CCGTTTCATC CACATATTAC CTTATTGCGC GACGCCAGCG AGGCGGTGAC AATCCCGCCG
CCGGGTTTTA ACTGGTCTTA TGCGGTGACG GAGTTCACCC TTTACGCCTC CTCGTTTGCC
CGTGGACGCA CACGCTACAC GCCGCTAAAA CGCTGGGCGC TCACGCAATA A
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| Protein sequence | MSEPQRLFFA IDLPAEIREQ IIHWRAKHFP PEAGRPVAAD NLHLTLAFLG EVSAEKEKAL
SLLAGRIRQP GFTLTLDDAG QWLRSRVVWL GMRQPPRGLI QLANMLRSQA ARSGCFQSNR
PFHPHITLLR DASEAVTIPP PGFNWSYAVT EFTLYASSFA RGRTRYTPLK RWALTQ
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