Gene ECD_00140 details

Gene Information

• Locus tag: ECD_00140
• Symbol: yadN
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21(DE3)
• Kingdom: Bacteria
• Replicon accession: CP001509
• Strand: -
• Start bp: 159151
• End bp: 159735
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 44%
• Product: predicted fimbrial-like adhesin protein
• Protein accession: ACT42041
• Protein GI: 253976371

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0047782
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTAAAA AATTAGGTTT TGCCCTGTCT GGTCTTATGC TGGCAATGGT TGCAGGTACT 
GCTTCTGCTG ATATGGATGG TGGTCAGTTA AATATCAGTG GTCTGGTTGT TGATAACACC 
TGTGAAACCC GCGTTGACGG CGGTAATAAA GATGGTCTGA TCCTGCTGCA AACTGCAACT 
GTTGGTGAAA CCGATGCTGG CGTGCTGAAT GACACCGTTG GCGCTAAAGC CAAACCTTTC 
AGCATCACCG TTGACTGCAG CAAAGCAAAT CCGAATCCAG GTAGTACAGC TAAAATGACC 
TTCGGTTCTG TTTTCTTTGG TAATAGCAAA GGAACGCTGA ACAACGACAT GTCTATTAAC 
AACCCATCTG ACGGCGTTAA TATCGCTCTG CACAATATTG ATGGTTCCAC TATCAAACAG 
GTTCAAATTA ACAACCCTGG CGATGTGTAT ACTAAAGCCC TGGATGCAAC GACAAAATCT 
GCTGTTTATG ATTTTAAAGC GTCTTACGTT CGTGCCGTCG CAGACCAAAC AGCAACTGCT 
GGTTATGTAA AAACTAACAC TGCATACACC ATTACTTATC AGTAA 

 

Protein sequence

MSKKLGFALS GLMLAMVAGT ASADMDGGQL NISGLVVDNT CETRVDGGNK DGLILLQTAT 
VGETDAGVLN DTVGAKAKPF SITVDCSKAN PNPGSTAKMT FGSVFFGNSK GTLNNDMSIN 
NPSDGVNIAL HNIDGSTIKQ VQINNPGDVY TKALDATTKS AVYDFKASYV RAVADQTATA 
GYVKTNTAYT ITYQ