Gene ECD_00139 details

Gene Information

• Locus tag: ECD_00139
• Symbol: ecpD
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21(DE3)
• Kingdom: Bacteria
• Replicon accession: CP001509
• Strand: -
• Start bp: 158306
• End bp: 159046
• Gene Length: 741 bp
• Protein Length: 246 aa
• Translation table: 11
• GC content: 44%
• Product: predicted periplasmic pilin chaperone
• Protein accession: ACT42040
• Protein GI: 253976370

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0365328
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTTTA ACACCAAACA TACAACAGCT TTATGCTTCG TAACCTGTAT GGCTTTTAGT 
TCATCGTCTA TTGCGGACAT TGTCATTTCG GGTACTCGCG TAATATATAA AAGCGATCAA 
AAAAGTGTCA ACGTACGTCT GGAAAATAAA GGGAATAACC CGTTGCTTGT CCAGAGTTGG 
TTAGATACTG GCGATGACAA CGCTGAGCCT GGCAGTATTA CAGTCCCTTT TACTGCCACG 
CCGCCAGTAT CGCGTATTGA TGCCAAACGT GGGCAAACAA TCAAATTAAT GTACACAGCC 
AGCACCTCAC TGCCTAAAGA CAGAGAGAGC GTGTTCTGGT TTAACGTACT GGAAGTTCCA 
CCAAAACCAG ATGCAGAAAA GGTCGCGAAT CAAAGTCTGC TGCAACTGGC ATTTCGCACA 
CGTATAAAAC TTTTCTATCG CCCGGATGGA TTGAAGGGAA ATCCCTCTGA AGCCCCGTTA 
GCCCTGAAGT GGTTCTGGTC AGGTTCAGAA GGTAAGGCGT CATTGCGAGT GACCAATCCA 
ACCCCTTACT ACGTCTCTTT TAGCAGTGGT GATTTAGAAG CTAGCGGTAA ACGCTATCCG 
ATTGATGTGA AAATGATTGC ACCATTTAGT GATGAGGTCA TGAAAGTCAC TGGCCTTAAT 
GGCAAAGCAA GTTCTGCAAA AGTACATTTT TACGCCATTA ATGATTTTGG TGGCGCCATT 
GAAGGTAATG CCAGTCTGTA A 

 

Protein sequence

MFFNTKHTTA LCFVTCMAFS SSSIADIVIS GTRVIYKSDQ KSVNVRLENK GNNPLLVQSW 
LDTGDDNAEP GSITVPFTAT PPVSRIDAKR GQTIKLMYTA STSLPKDRES VFWFNVLEVP 
PKPDAEKVAN QSLLQLAFRT RIKLFYRPDG LKGNPSEAPL ALKWFWSGSE GKASLRVTNP 
TPYYVSFSSG DLEASGKRYP IDVKMIAPFS DEVMKVTGLN GKASSAKVHF YAINDFGGAI 
EGNASL