| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_00043 |
|---|
| Symbol | caiA |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 43438 |
|---|
| End bp | 44580 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | crotonobetaine reductase subunit II, FAD-binding |
|---|
| Protein accession | ACT41944 |
|---|
| Protein GI | 253976274 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTTA ATTTAAATGA TGAGCAGGAA CTGTTTGTCG CCGGTATCCG CGAACTGATG
GCCAGCGAAA ACTGGGAGGC CTATTTTGCC GAGTGCGACC GTGACAGCGT CTACCCGGAA
CGTTTTGTCA AAGCACTGGC GGATATGGGT ATCGACAGTC TGCTGATCCC TGAAGAGCAC
GGTGGTCTGG ACGCGGGGTT TGTTACTCTC GCCGCCGTGT GGATGGAGCT GGGACGTCTG
GGGGCACCAA CCTATGTGCT GTACCAGTTG CCGGGCGGGT TCAACACCTT CCTGCGCGAA
GGCACACAAG AGCAGATCGA CAAAATTATG GCTTTCCGCG GCACCGGTAA GCAGATGTGG
AACTCAGCGA TTACCGAACC GGGCGCGGGC TCCGACGTGG GTAGCCTGAA AACGACTTAT
ACCCGTAGAA ATGGTAAGAT TTATCTTAAT GGTAGTAAGT GTTTTATTAC CAGCAGCGCC
TACACCCCGT ACATCGTGGT GATGGCGCGC GACGGGGCTT CTCCGGACAA ACCTGTCTAC
ACCGAATGGT TTGTTGATAT GAGCAAACCG GGCATCAAAG TGACCAAACT TGAGAAGCTC
GGTCTGCGTA TGGATAGCTG CTGTGAAATC ACCTTTGACG ACGTGGAACT GGACGAGAAA
GACATGTTCG GTCGGGAAGG TAACGGCTTT AACCGCGTCA AAGAAGAGTT CGACCATGAA
CGTTTCCTGG TAGCCCTCAC CAACTACGGT ACGGCGATGT GCGCCTTTGA AGATGCGGCG
CGCTACGCCA ATCAGCGCGT GCAGTTTGGC GAGGCTATTG GTCGTTTCCA GTTGATTCAG
GAAAAATTCG CCCACATGGC GATCAAATTA AACTCCATGA AAAACATGCT GTATGAAGCA
GCGTGGAAAG CAGACAACGG CACCATCACC TCTGGCGATG CAGCGATGTG CAAATACTTC
TGCGCCAATG CGGCATTTGA AGTGGTGGAT AGCGCAATGC AGGTGCTGGG CGGTGTCGGG
ATTGCGGGCA ACCACCGCAT CAGCCGCTTC TGGCGTGACC TGCGTGTAGA CCGCGTTTCC
GGAGGATCTG ACGAAATGCA GATCCTGACG CTGGGTCGTG CGGTGCTGAA GCAATACCGC
TAA
|
|---|
| Protein sequence | MDFNLNDEQE LFVAGIRELM ASENWEAYFA ECDRDSVYPE RFVKALADMG IDSLLIPEEH
GGLDAGFVTL AAVWMELGRL GAPTYVLYQL PGGFNTFLRE GTQEQIDKIM AFRGTGKQMW
NSAITEPGAG SDVGSLKTTY TRRNGKIYLN GSKCFITSSA YTPYIVVMAR DGASPDKPVY
TEWFVDMSKP GIKVTKLEKL GLRMDSCCEI TFDDVELDEK DMFGREGNGF NRVKEEFDHE
RFLVALTNYG TAMCAFEDAA RYANQRVQFG EAIGRFQLIQ EKFAHMAIKL NSMKNMLYEA
AWKADNGTIT SGDAAMCKYF CANAAFEVVD SAMQVLGGVG IAGNHRISRF WRDLRVDRVS
GGSDEMQILT LGRAVLKQYR
|
|---|
| |