Gene ECD_00018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_00018 
SymbolnhaA 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp17488 
End bp18654 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content51% 
IMG OID 
ProductpH-dependent sodium/proton antiporter 
Protein accessionACT41920 
Protein GI253976250 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.89758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACATC TGCATCGATT CTTTAGCAGT GATGCCTCGG GAGGCATTAT TCTTATCATT 
GCCGCTATCC TGGCGATGAT TATGGCCAAT AGCGGCGCAA CCAGTGGATG GTATCACGAC
TTTCTGGAGA CGCCGGTTCA GCTCCGGGTT GGTTCACTCG AAATCAACAA AAACATGCTG
TTATGGATAA ATGACGCGCT GATGGCGGTA TTTTTCCTGT TAGTCGGTCT GGAAGTTAAA
CGTGAACTGA TGCAAGGATC GCTAGCCAGC TTACGCCAGG CCGCATTTCC AGTTATCGCC
GCTATTGGTG GGATGATTGT TCCGGCATTA CTCTATCTGG CCTTTAACTA TGCCGATCCG
ATTACCCGCG AAGGGTGGGC GATCCCGGCG GCTACTGACA TTGCCTTTGC ACTTGGTGTG
CTGGCGCTGT TGGGAAGTCG TGTTCCGTTA GCGCTGAAGA TCTTTTTGAT GGCTCTGGCT
ATTATCGACG ATCTTGGGGC CATCATTATC ATCGCATTGT TCTACACTAA TGACTTATCG
ATGGCCTCTC TTGGCGTCGC GGCTGTAGCA ATTGCGGTAC TCGCGGTATT GAATCTGTGT
GGTGTACGCC GCACGGGCGT CTATATTCTG GTTGGCGTAG TGTTGTGGAC TGCGGTGTTG
AAATCGGGGG TTCACGCAAC CCTGGCGGGG GTAATTGTCG GCTTCTTTAT TCCTTTGAAA
GAGAAGCATG GGCGTTCTCC AGCGAAGCGA CTGGAGCATG TGTTACACCC GTGGGTGGCG
TATCTGATTT TGCCGCTGTT TGCATTTGCT AATGCTGGCG TTTCACTGCA AGGTGTCACG
CTGGATGGCT TGACCTCCAT TCTGCCATTG GGGATCATCG CTGGCTTGCT GATTGGCAAA
CCGCTGGGGA TTAGTCTGTT CTGCTGGTTG GCGCTGCGTT TGAAACTGGC GCATCTGCCT
GAGGGAACGA CTTATCAGCA AATTATGGCG GTGGGGATCC TGTGCGGTAT CGGTTTTACT
ATGTCTATCT TTATTGCCAG CCTGGCCTTT GGTAGCGTAG ATCCAGAACT GATTAACTGG
GCGAAACTCG GTATCCTGGT CGGTTCTATC TCTTCGGCGG TAATTGGATA CAGCTGGTTA
CGCGTTCGTT TGCGTCCATC AGTTTGA
 
Protein sequence
MKHLHRFFSS DASGGIILII AAILAMIMAN SGATSGWYHD FLETPVQLRV GSLEINKNML 
LWINDALMAV FFLLVGLEVK RELMQGSLAS LRQAAFPVIA AIGGMIVPAL LYLAFNYADP
ITREGWAIPA ATDIAFALGV LALLGSRVPL ALKIFLMALA IIDDLGAIII IALFYTNDLS
MASLGVAAVA IAVLAVLNLC GVRRTGVYIL VGVVLWTAVL KSGVHATLAG VIVGFFIPLK
EKHGRSPAKR LEHVLHPWVA YLILPLFAFA NAGVSLQGVT LDGLTSILPL GIIAGLLIGK
PLGISLFCWL ALRLKLAHLP EGTTYQQIMA VGILCGIGFT MSIFIASLAF GSVDPELINW
AKLGILVGSI SSAVIGYSWL RVRLRPSV