Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ANIA_00687 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Aspergillus nidulans FGSC A4 |
Kingdom | Eukaryota |
Replicon accession | BN001308 |
Strand | - |
Start bp | 2734244 |
End bp | 2737751 |
Gene Length | 3508 bp |
Protein Length | 292 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | SPEE_NEUCR Spermidine synthase (Putrescine aminopropyltransferase) (SPDSY)Spermidine synthase ; [Source:UniProtKB/TrEMBL;Acc:Q96UK1] |
Protein accession | CBF88983 |
Protein GI | 259489040 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0245042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTCTTCCCTC GCTTCTCCGC CTCAACTTCA TCTTTCCTTC TGTCTCTCCG TTCCAGTGCT TTACTGCGTC CTGTCATTCT CTCTTATTCC CCTTATTCCC TCCGGTCTTT CAACTTCATC ACAATGAGCG AGATCACTCA CCCCACTATC AAGGGTATGT ATATTTCTCC CACTGCCCGT ACTCTACCCC GCCCTCAACG TAAATCCAAA CCATCACTCT CATTGCACCG TTTCAGGACG ATCTGAAGTA TCCAGACTTT GCTTTTTAGT ACTTCGGTTA ACATGTATCC TTACTAACCC CAATCTAATC CAGATGGCTG GTTCTCCGAG CAGTCTGAAA TGTGGCCTGG TCAGGCCATG AACCTCAGAG TCAACCAAAT TCTCCACCAC GAGAAGTCCA AGTATCAGGA CGTTCTTGTC TTCGAGAGCA GCGACTATGG CACCGTTCTT GTTCTTGACA ACGTCATCCA ATGCACCGAG CGTGATGAGT TCTCGTATGC CGTACCCCTC TTCCCCTCCC CTCGTTAAAA CAAACACCTC TCATGCGACG AAGAGACTGA CTTGGTTTTT TTCTTTCCAG CTACCAGGAA ATGATTACCC ACCTGGCCAT GAACTCCCAC CCCAACCCCA AGAAGGTCCT CGTTATCGGA GGTGGAGATG GCGGTGTCCT CCGCGAGGTA GTCAAGCACG AGACCGTCGA GGAGGCCATC TTGTGCGACA TTGATGAGGT AACAAAATCT GCTTTTTCCT GCCTTACCTT GCCAATTACC TACATATGCA ACTGCCGCTG CATGCAATTT AGTCGCCAAA AGGCTGACGG GCTTCATCAT TGCAGGCCGT CATCCGTGTC TCCAAGAAGT ACCTTCCCGG CATGAGCATC GGCTTCCAGC ACCCCAACGT CAAGGTCCAC GTCGGCGACG GCTTTGAGTT CCTCAAGCAG CGCCAGAACG AATTTGATGT CATCATTACC GATAGCTCTG ACCCCGAGGG TCCCGCCGAG AGCCTCTTCC AGAAGCCCTA CTTTGAGCTC CTCAGAGACG CTCTACGTGA TGGAGGTGTC ATCACCACCC AAGGTTGTTC GTCGCCTTTC TTTTTATATT CTGCCTCCAT CTGCTTTTTC TCTATACCTT GACTTCTCGT TTTTTTCTTG TTGTCTTGTA CTCTCCCAGC CTTCCCATAG CCCTAGCCCG CACTTTTTCT CCCCTTATTC TCTCTCTTCC ATTTTTCCTT ATACGATATT TTTGATATAA GGGTTCCCGG GCTAACCAAG TCTCGACCCA AACCACCCGA TCCCGGGATC GGTTTGGGTT TCACGTTTTC TCCGTTACAG CCGAAAACCA ATGGCTTCAC CTTCCTCTGA TTGCCGACCT CAAGAAGGCC TGCAACGAGG TCTTCCCTGT CGCCGAATAC GCGTACACCA CAATCCCTAC GTACCCATCC GGTCAAATTG GTTTCATGGT TTGTTGCAAG GATGCCAACC GCAATGTTAA GGAGCCCGTC CGCACCTGGT CTCGTGAAGA GGAGGAGCGT CTCTGCCGCT ACTACAACCA GGATATCCAC CGCGCCAGCT TCGTGCTGCC CAACTTTGCT CGCAAGGCTT TGGGAAATTA GATTCAGATG AGATGAGCAT ATCTTTGTTT TTGTTTAAAA GAATACCATA TCAACTGAAT TTCTCCTGTG ATTATCTATT TCACTATACT TTTATACTCC GTGTCCTATA TTATGAGAGG ATTGAGGATT TAGGACCCAA ACTAGGTGAT CTGATAACGG GATATAAACC AACACCCAAA GGTCAAACTA CGTCAGTTAC TCACTCCTGG ATGCGCATAA GCTTTCAGCC AGAAGTATTC AAGACCGAGA GCAAATATGA ACAGATAGAT GGTATTCTTT TCGCAGATGT CTAAAAATAT CAGAGATGGC CAGACCTTGA AATAAGTTCA ATGGTGGCTT TTATTCTTCT CAAAAGGAAA TTCGTAGGAC ATTAAACCAA GTGTGCCACG CATTCGGAGT TTCTCTCCGT ATGGCCACCC CATAACCCAT GTAATACTCG TTAGCAAGGA AAGATGTCGA AGGAAAATGC AAGCGAGTCA TGACGCTAGA ACGAGACGTC TACAGGATCT GCTGGAAAGC GCGGTTGATG GGCGACCGAA CGGGAACACC CTTATAGAAG TCAATGGTGG CAAGGGCGCG CTTGCTAATA CCCTCAGGAG TGAACTCGAA CTTGGCGTAG ACCTCCTTGT AGGGACCAGA GGCACCGAAG CGGTTCAGAC CGAACTGCTC GTGAGAGTAG CGCTCCCAAC CCATGGTGGA GCAGACCTCG ACAGACAAAA TGGGGATGCC GTCGGGGAGG ACCTTGAGTC TGTACTCCTT GTCCTGAGCA TCGAAGACCT CGAAGCAAGG AATAGAGACG ACACGGGCCA CGACGCCGTG CTTTTCCTGC AGGTACTTGG CAGCGTCGAT ACAGATACTG ACTTCGGATC CAGTGGAGAT GATGGTAACC TTGGCGTCAG CAGCCTCGAA GACAGGGTAA GCACCCTTGA GAGCAGCCTC AATGCTTGAG TTCTCAAGCT GGGGCAGGTT CTGACGGGTA AGAGCCAGGA TGGAGGGAGT GTGCTTAGCA GTCAGGGCAG AATAGTAAGC AGCACTGGTC TCGTTACCAT CAGCAGGGCG CCAGACCATG CAGTTGGGAA GAGCACGGAA ATGAGCGAGA GTCTCGATAG GCTGGTGGGT AGGGCCGTCC TCACCCAGAC CAATGGAGTC GTGGGTAGCG ACGTGAATGG CACGAACGCG AGAGAGGGCG GACAGACGGA CAGCACCAGC AGCGTAGGAA ACGAAGTTCA GGAAAGTACC GGCGGCAGGG ATGACGGTAC CGTATGCAGC AAGACCGTTC ATGATAGCAG CCATGGCGTG CTCACGGACA CCGTAACGGA GGTAGCGGCC AGACCACTCA CCAATGCCGT ACTCGGGTGG CTGGAAGTCA ACAGCGTTCT TCCAGCGGGT GTTGTTGGAG CCAGTCAGAT CGGCGGAACC AGACAAAAGT TCTGGGATGA CCGAGTGGAT CTTCTCAAGG ACAGCCTCAG ACAGCTTGCG GGAGGCAATA GCGGGGTCAG AAGGCTTGTA AACAGGAAGC GACTTCTCCC ATCCCTCAGG AAGCTTGCCG GAGAGACGGC GGGTAAGGTC GGCGTGCTCG TTGGGGTATT CGCCGGCGTA TTTCTGGAGG AGCTGGTTCC ATTCCTGCTC CTGGGCAGCA CCCTCTTCGG CGTGTTTGTG GTAAAGGTCA TAGACCTGCT GAGGGACGAC GAAGCTCTGG GCGGGATCGA AGCCGAAGCG CTTCTTGACA CCCTCGATGT CGTCGGCTTT GAGAGGGTTA CCGTGGACAC CGCCGGTACC CTGGAGCTTA GAACCGAAAC CGATGGTGGT AGTCAGGCGG ATCATGGAGG GCTTGTCCTT GACGGCCTGG GCCTCCTTGA TAGCAGCCTC GATGCCCTCG AGGTCGTTGT CACCGTCC
|
Protein sequence | MSEITHPTIK DGWFSEQSEM WPGQAMNLRV NQILHHEKSK YQDVLVFESS DYGTVLVLDN VIQCTERDEF SYQEMITHLA MNSHPNPKKV LVIGGGDGGV LREVVKHETV EEAILCDIDE AVIRVSKKYL PGMSIGFQHP NVKVHVGDGF EFLKQRQNEF DVIITDSSDP EGPAESLFQK PYFELLRDAL RDGGVITTQA ENQWLHLPLI ADLKKACNEV FPVAEYAYTT IPTYPSGQIG FMVCCKDANR NVKEPVRTWS REEEERLCRY YNQDIHRASF VLPNFARKAL GN
|
| |