Gene ANIA_00444 details

Gene Information

• Locus tag: ANIA_00444
• ID: 0
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Aspergillus nidulans FGSC A4
• Kingdom: Eukaryota
• Replicon accession: BN001308
• Strand: +
• Start bp: 3479460
• End bp: 3483072
• Gene Length: 3613 bp
• Protein Length: 1090 aa
• GC content: 52%
• Product: ubiquitin-protein ligase (Hul4), putative (AFU_orthologue; AFUA_1G04640)
• Protein accession: CBF89472
• Protein GI: 259489309

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.358914
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 0.139681
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCGTCGC TGGCTGCGCA TAAACCGTCG GCCCATCAAT CCGCGAGTTC GGCCGGCGTC 
CAACCTGGCA CAAGCCCCAT TCCCGTGCCT ATAGTTGGGG GTCGCTCCCC AAATCGCCTG 
CGCTATGGCG AGCCAAGGGT GACCGGCGCC CCGATCTCCC CGCCGTCGGG CCCGACATTC 
CACCGCGGAC ACTCGCGTTC AATCAGCCAG CCCTTTGCGT CCGCTCTTTC CGGAGTTGGG 
AAACGCCGAA ACAAATCGAT ATCTGTTGAG GCGGACGTGG ATACTGATGA TGATGATGAA 
GACGACGATG ATATTTACAT TCCGAATCCG AATCCCATAT CTTCGAGTCC CCGCAAGGGC 
CTGCCACGAG TACCCCCAAA GGAGGAATTG ACGACTGGGA AGTGCATGAC CTGCAATAAT 
ACGGTGCGGT GGCCACGGCA TTTAAAAGTC TTTCGATGCA CGGAATGCTT GACGGTGAAC 
GACCTGGATC CTTGCCAAGA TTCAAAAGGT TCAGTAAATT TGAGCACAAG GAAGAATGCA 
AAGCCAATCC AGACGATTCC CAGAAAAGGT ATGCCGTTCA GTTGAGCCGC GTCTTACTCA 
TTGTGGAACT AAGCTGACAG TTATCTCAGC AATTCCATTG ACAGTTGAAC GAACCAAGAA 
CATTATCGAT CGATGCATCA CCACTTACCT ACAACAATGC CTAGGAGCCC CGCCAGTGCC 
CCCGAAGGAT ACATCGAGCG AAAGCTTCCG ACAGACCTCA TCTAAAGCCT CTGAGCACCT 
GACTGTACCC CAACACCCAA CTGCGCCACG GGGTCGCAGC GTGTCGTCGG CAGGCACGCG 
CGAAAAGGCC GATGGTGGTG ACACGGAGCT TGGGAATTTC AGCTACTCAA AAAATCCTTA 
CCCCCCTGTT CCTCCACCTA AGGACAGTCG GAATGCTCCC AATTCTGTTA ACTCTAGAGA 
GAGAAGTCGA CTACGTGAAA GTGGGAAGGA GAAACATCCT TACATATTCC GAGAACTGGA 
GGACTATATA ATATCAGGAC TCAAAGGCTG TGACACTTTG AATGTGTCTT TCAATTCAGC 
CCATCATGCT CCCAGGGCCA CACCAGAAAA CAGCCAACCT GAACGCGACG TGGAGCGAAA 
TCCTAGAAGA GCACAGGTAG ATACAGCCGT TGAACTTGAT GCTAAGACTT TGCTGGTGGG 
AGACTTGGTT GAGAACTCTT CTTGGTGGAT GGTCGACGAA GATTCTACTG GAGTGCCGAG 
TCATAGCCAA CATAAACACA GAACTACGAA AATAGTCAGT TCTAGGAGCC CACGTATCAA 
CTGGATCGAT GTCGATAAGT GGTATCAGCT CGTTCTAACG GCTGGTACAA CTTGGGTCGA 
GAAGTGGTCA GTCATGAAGG TCTCCGAGGA AGAGGATCGT GCGAGGGCAG AGGCATGGCT 
TATGGCAGAT CTGAGTGTAA TTGAAAAGGA GTTTACGGAC TCGCGCGCAC ACCTTCATAG 
GACGCTCCTG AAAGCTACGG AGAGCCTTCT CAAACGACCA CGGAGGCCAT TGAAGAAACC 
TGATGATATC AGATTCCTGC TAATACTTCT ATACAATCCC CTGATTTATC CGCCTAGTTC 
GACACTGGCA AATCTTACAG TTGTTGATGG TGAGCTGAAG CCGTCACATT CTGTGGGAAA 
TAGTTCTGAA GGGCGGGCGG CAGGTAATAA AGCGCATACT GCAAAAGCGC AAAGCGGAGG 
GCCTGTTCAG CACCCTGGAA TAATCAAGCG CATATTGGGC TTACTGTCAG ACCTACCGAG 
CGACTGCCAT CACTACCTCG TTTCATGGTT TTCACGCTTC TCGGTTGGTC ATTTTGAAAA 
GCTCGTTGAA CTTGTAGGCA GATTTGTGAC ATATCGTCTA TCCCGCCAGC ATGTCCGAAG 
AAAAAGCGAA TCAGCGAATG ACGACAACTA CCTAATACCT AGCTTATCCA GCGCTGCTAT 
GAATACGCCA TCAGAGTTAC ACGCGGCCAT CAATGGAATC AATCAGAACA AGCAGGCGAA 
GAAAAAGGCC GATGCCCCCA TGACGTACAG TGATGATTGG CAGGTTCGGG CTGCAGGCCG 
AGTAATGGCG TTACTGTTTA CTGCGAATAA TGCAGACATA CCTCGTAAAC CACCAGGAAC 
AGAATCAGCA GTCATGTCCA GGCAGCAAGG AGCTCACCGT GGGCACATCA TTCCAATCAG 
CTCCTTTTAT AACACAAGGC TTGATTATTC AAATCTTGTG GTGGCAGACT TTGAGGCCTG 
GGAGTCGAGA ACAACGAAAT TCTCTTTTTG TCAATATCCC TTCTTCCTCA GCATTGGAGC 
TAAAATCCAG ATCCTGGAAC ACGATGCCCG CCGCCAAATG GAGGTCAAAG CCCGAGAAGC 
GTTCTTCAGT AGCATTCTGA CGCGAAAGGC CGTGAGCCAG TATTTCGTGC TAAGAGTACG 
GCGCGAGTGC TTGGTAGAAG ACAGCCTGCA GCGTGTCAGT GAGGTTCTGG GGTCGAGCCC 
TGAGGAAATG AAAAAGGGGC TTCGTATCGG GTTCGTTGGT GAAGAGGGTG TGGACGCAGG 
TGGGTTGCGG AAAGAGTGGT TCCTGCTCCT CGTCCGGGAG GTGTTTGATC CCCATCACGG 
TACGTCCCAA GTCCAGCCCT TGAGATAATT GCAGCGGCTA ACTTGCGGTC TAGGACTATT 
CATCTACGAT GAAGATTCTC GGTATTGTTA TTTCAACCCA TATTGCTTAG AATCGTCAGA 
GCAGTTCTTC TTAGTTGGAG TTGTGCTTGG GCTGGCTATC TATAACTCGA TTATTCTTGA 
CATCGCCCTT CCGCCGTTCG CATTCAAAAA GTTGCTGGCA GGAGCGCCGC AGACGACTGG 
ACCGCAGCCA TTAACGACAC GTCCTACATA TAAGTGCAGC CTAGAAGATC TGGCGGAGTA 
TCGGCCTGTC CTTGCTAGAG GCCTGCGGGC ACTTTTGGAG TTCGAGGGTG ATGTCGCCGA 
AACTTTTTGC CATACTTTTG TTGCCGACGT CGACCGGTAT GGTGAGGTTG TCTCTGTACC 
ACTTTGTCCC GGCGGCGAGA AGAAACCGGT GACAAATGCG AACCGTCGAG AATTTGTCGA 
TCTCTTTGTT CATTATCACT TAGACACCGC GGTGGCGCGG CAGTTCGAGC CCTTCCGGCG 
TGGATTCTTC AGCGTCTGCG GCGGCAATGC GTTGTCCTTA TTCCGTCCCG AAGAGATTGA 
ACTCTTGGTT CGTGGATCTG ATGAGCAGCT AGATGTGAAA TCGCTGAGGG CGGTCGCCAC 
ATATCTCAAC TGGGGGACAC CAAAGCCAGA GTCGGTGCCC GTGGTGCGAT GGTTTTGGGA 
GTATTTTGAA CGGGCAAATC CCGAAGCACA GCGCAAAATC CTTTCATTCG TCACGAGCAG 
CGACCGCATT CCGGCCATGG GGGCAACGAG TCTGAACATC CAGCTGATTT GTTTAGGAGA 
TGACTCGCCG CGGTTTCCAA CCGCACATAC ATGCTTTAAC CGGCTTGGGT TGTACAGGTA 
TAAGACACGG GAGAAGTTCG AGCGATTACT CTCGGAGGCA GTGCTGAACA GTGAAGGATT 
TGGGCTGAAG TAA 

 

Protein sequence

MPSLAAHKPS AHQSASSAGV QPGTSPIPVP IVGGRSPNRL RYGEPRVTGA PISPPSGPTF 
HRGHSRSISQ PFASALSGVG KRRNKSISVE ADVDTDDDDE DDDDIYIPNP NPISSSPRKG 
LPRVPPKEEL TTGKCMTCNN TVRWPRHLKV FRCTECLTVN DLDPCQDSKG SVNLSTRKNA 
KPIQTIPRKG MPFTIPLTVE RTKNIIDRCI TTYLQQCLGA PPVPPKDTSS ESFRQTSSKA 
SEHLTVPQHP TAPRGRSVSS AGTREKADGG DTELGNFSYS KNPYPPVPPP KDSRNAPNSV 
NSRERSRLRE SGKEKHPYIF RELEDYIISG LKGCDTLNVS FNSAHHAPRA TPENSQPERD 
VERNPRRAQV DTAVELDAKT LLVGDLVENS SWWMVDEDST GVPSHSQHKH RTTKIVSSRS 
PRINWIDVDK WYQLVLTAGT TWVEKWSVMK VSEEEDRARA EAWLMADLSV IEKDSEGRAA 
GNKAHTAKAQ SGGPVQHPGI IKRILGLLSD LPSDCHHYLV SWFSRFSVGH FEKLVELVGR 
FVTYRLSRQH VRRKSESAND DNYLIPSLSS AAMNTPSELH AAINGINQNK QAKKKADAPM 
TYSDDWQVRA AGRVMALLFT ANNADIPRKP PGTESAVMSR QQGAHRGHII PISSFYNTRL 
DYSNLVVADF EAWESRTTKF SFCQYPFFLS IGAKIQILEH DARRQMEVKA REAFFSSILT 
RKAVSQYFVL RVRRECLVED SLQRVSEVLG SSPEEMKKGL RIGFVGEEGV DAGGLRKEWF 
LLLVREVFDP HHGLFIYDED SRYCYFNPYC LESSEQFFLV GVVLGLAIYN SIILDIALPP 
FAFKKLLAGA PQTTGPQPLT TQDLAEYRPV LARGLRALLE FEGDVAETFC HTFVADVDRY 
GEVVSVPLCP GGEKKPVTNA NRREFVDLFV HYHLDTAVAR QFEPFRRGFF SVCGGNALSL 
FRPEEIELLV RGSDEQLDVK SLRAVATYLN WGTPKPESVP VVRWFWEYFE RANPEAQRKI 
LSFVTSSDRI PAMGATSLNI QLICLGDDSP RFPTAHTCFN RLGLYRYKTR EKFERLLSEA 
VLNSEGFGLK