Gene ANIA_00407 details

Gene Information

• Locus tag: ANIA_00407
• ID: 0
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Aspergillus nidulans FGSC A4
• Kingdom: Eukaryota
• Replicon accession: BN001308
• Strand: -
• Start bp: 3601282
• End bp: 3604729
• Gene Length: 3448 bp
• Protein Length: 1077 aa
• GC content: 52%
• Product: RNA polymerase III transcription factor TFIIIC subunit (Tfc4), putative (AFU_orthologue; AFUA_1G04980)
• Protein accession: CBF89548
• Protein GI: 259489350

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 0.221403
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGACTACT TCGGCGAGGA TGACCCCAAT CATAGCCCTC ATCTCGGGGA GATTGCCTAT 
CCTGACATTG ATGAAACTGT CCAATACCCA TGGCAAGGGA GTGGGCAATC CTTCTCGCAC 
GAGGCTTCAG CCATAGACCC GCGTCTGTAC AAAGACTTAT TCTCAGGGGG CGAGTCTCAG 
GAGCCTACAC AGTCCGCAGC TGATGAGGAG CAATTTGCAC CTGAAGAGGA ACAGTCTCTA 
GAGCTGGATA ACTCTGACGA ATCATCCAGT TTTGTAGCAT CGTCTGAAGA GGAAACATCG 
TAAGTACTGC AAACGCCTAT CCTAAATGAG AGCTGACAGT TGCAGGGAGG ATCTTTCGGA 
TGATGATGCC CCAGGCTCAG ACCAGGAAGA TGGACTCCGT CGACGCCGTC GACGCAGAGG 
TCGCTTCTCC GGTCGATTTG GCGCCCGCGG GGGTAAAGGA ATCAAGAGAG GTCCCCGCAA 
ACCGGTAGAG CCCAGTCCGG AGTTCAAGCT TTTGCACTCG GAGGCAACAT CTGCTTTCAT 
CGATGGGGAC TATGACCGCG CAATCGACCT TGTTAGGCGT GCCATTCAGG TCAACCCTGA 
GATGTTTGCA GCTCACTCCT TGCTCTCAGA GATTTTCCTA GCCCAAGGCG AGAAAGAAAA 
GGCCGTGACA GCACTGTTCA GCGGCGCTCA CACTCGGCCA AGAGATACAA CAGTGTGGTT 
GAAGGTGGCT AGGATGATAA CGGAACAGGC AGGCGACGAT AGACAGGCTG TACTGAACGA 
CGTCCTCTAC TGCTATAGTC GCGTGCTTGA AATTGATCCC CAAAACCACA ACACCCGCTT 
CCAGAGGGCT GCCCTCTATC GGGGCTTGGG TCACAATGGA CGAGCAGTAA CCGAGTATGA 
GAGAATCCTT AGGGATCTTC CTCACAACGT TCGAGCGCTC CGGCTCCTTA CAGATACCCT 
TTCCGAGCAA AATCAATATC AAAAAGCGCT TGACTATTGG TCAGAGAGCA TACAGCACTA 
TATGGCACAG GAGCCTGAGG AGACCCCAGA GTTCACGTGG TCTGACGCTA ATATTTACAT 
CGAGCTGTAT ACGTACTTGG GACGGCATGC TGAAGGGCTC AAAGCTGCGA AAGCGGTGTC 
GCGATGGTTA TTGGGGCGCA AAGACGACAC TATGTGGGAT GACTTTGACG AGGATGATCG 
TGAATGGGAC CACGCCGACT TCCCTCGAAG GATTAAAGCA GATGGTTATA TTCCGAAACA 
GTGGCCGCCG GACTCGTATG GCCCAGGTTT ACCCCTTGAA TTTCGCATAA AACTCGGTCT 
CTTCCGTTTG AAGCTACCGG AGCGGCACAT CAATGAAGCT CTTGTAAGTC TATATCAGAA 
GCTGCTTTTT TGTTCTCTAC TAACTCTGTT TAGCATCACT TCAGATGGCT TAAACCAGAG 
GATACCTCAG ACGGGTCTCT AGTTTACGAT TACGGTGACC TCTTTCGAGA AGCCGCCGAC 
GCGCTCAAAG ACGCCGAGAT GTTCGAGGAC GCCCTTCGAT TCTATAGGCC CATTCAGAAA 
ACCGAGTACG CGGATGTCAG CTTCTTCATG GCCATGGGAG ATTGCTTCAA GTCCCTGGGC 
GAACTGGAAG ACGCAGAAAA TTGTTATTTG ACTGTTGCAG AACATGACAC AAGCAATATT 
GAATCTCGAG TGCAACTTGC CAAGTTATAC GAAAGCATAG GAATGACCGA GCAGGCGCTC 
AGATATGTCA ACGATGCCGT TCTACTAGGA CGGCAGGAGC ATAGAAGTAA TCGCCGACGG 
AAGGATACCC GGCTCGAAGA GCTCGCAAGG GAGTTCAAGT CGGTGAATGT GGCCGCAGGG 
CCTAAAGACC AGTCCGTTGA ATCCTCATCA GCCCTTGGTA ACAAGGGTGA GGCAGAAAGG 
ACCGAAAATA TACAGTTCCT TTTCAAGAAG CTGACGCAAT TGGAACCGAA ACTCCAAGCT 
GGAGACTCTG AGGCCACGGA GGACTGGCTA GACATTGCTG ACGCTCTTCT GCGTGAATTT 
CGTTCCAACA GAATCTTTTA CCCGCTTCAA CGCAATGTGG TATTCCTTGG ATATAGTAGC 
AAGGCGGGCA AGGATGCGCT TATGGATGAA TTACAAGAAA TGGCGAATCG GCTTCAGGAG 
TCACTAGGTG CGGTACGTCC GGTAGGCGTC ACGTCCGGGC TTAGCTAACT TCGCATAGGG 
GTGGATGAGG AATTTCCGCA GTCTACAATC CCTACAGACT ACCATGGCAT CAGTTTCGAC 
GAATGGCTTG ACCTATTCCT GCAGTACGCC CTAACGGTGG CAGGTCAAGG TGAATTCAGC 
GAAGCGTATG ATACTCTAGG AGCCGCTGCG GACGCGAGTG TCTGGTACCA CTCTAGAGAC 
AGCTCAAGAT TGATTCATGT GTGCTGGTTC AGTAAGTACC TTGATTGACA CTCTCAGCAG 
TAAACTGATT GACTTAATAG CTTGTGCACT CCGACTCCAA GACGAAGAAA CTCTCGCCAA 
CGAAGCTCGC TGGTTTATTA AAGAGTACCA ATTTGTGACA GACACATACC GCCTGTTTGC 
CATGCTTAGC TGTCTCAGCG GCGACCCTCA CCGATCGCTT TTCCACTCAT CCCCCTTGAT 
GAAGTTCATG CTCCGCCAGA TTAAAGCCAT AGACTTTACC CTCCCCGACC ACATCGCCGG 
CGCCCGTCAC ACCAAAGCCA TCCGAGAATC AATCTACAAG GAACGAGCAG CACTATCAAC 
AAAAGACGAG AAGGGAGAGC CTATCCCAGC AGAGGAAATG GACGTAGCCC TACTTGTCCT 
CTACGGCCAC ATCCTCTACT CAGGAAACAG CTTCTACCCA GCCCTCAACT ACTTCTTCCG 
CGCGTACGCA CTGGACGACA AGAATCCGGC CGTCCTTCTT TCAATAGGCC TCTGCTACAT 
CCACCACTCC ATGAAACGCC AGTCCGAGAA CAGGCACTTC CAAATCATGC AAGGACTCTC 
CTTCATGAAC GAGTACAAAC GCCTCCGCGA ACGCAAGGGA ACACCCCTTG TCGAGAGGCA 
AGAGATGGAA TTCAACTTCG CCCGTGTTTG GCATACCCTC GGACTCGCGC ATCTCGCAGT 
GGAAGGATAC CAGCGCGTCC TCGACCTCGG CAAAGAAATA CAAGCACAAT TCCAAACAAA 
ACAGTTGCTT ACTCCTGCTC ACGCAGCCAA TGGAGCGCAA GCAGACGATA ACGATGCAGA 
CATCTCAATG CCCGACGTCG ACTCCAATGT CAATATAGAC GTCAATGTTG ATCGGGCCAC 
CCACAGCGTA GAGGTGAAAC CGCAATCGCC ACAGCCTGTC ATAGAAAACT TCTCCCGCGA 
AGCAGCAGTT GCCCTGCAAC AACTGTACGC TCTCAATGGC GACTTCCAGT CCGCACAGGC 
GGTCACGGCG GCTTGGCTTG TGATCTGA 

 

Protein sequence

MDYFGEDDPN HSPHLGEIAY PDIDETVQYP WQGSGQSFSH EASAIDPRLY KDLFSGGESQ 
EPTQSAADEE QFAPEEEQSL ELDNSDESSS FVASSEEETS EDLSDDDAPG SDQEDGLRRR 
RRRRGRFSGR FGARGGKGIK RGPRKPVEPS PEFKLLHSEA TSAFIDGDYD RAIDLVRRAI 
QVNPEMFAAH SLLSEIFLAQ GEKEKAVTAL FSGAHTRPRD TTVWLKVARM ITEQAGDDRQ 
AVLNDVLYCY SRVLEIDPQN HNTRFQRAAL YRGLGHNGRA VTEYERILRD LPHNVRALRL 
LTDTLSEQNQ YQKALDYWSE SIQHYMAQEP EETPEFTWSD ANIYIELYTY LGRHAEGLKA 
AKAVSRWLLG RKDDTMWDDF DEDDREWDHA DFPRRIKADG YIPKQWPPDS YGPGLPLEFR 
IKLGLFRLKL PERHINEALH HFRWLKPEDT SDGSLVYDYG DLFREAADAL KDAEMFEDAL 
RFYRPIQKTE YADVSFFMAM GDCFKSLGEL EDAENCYLTV AEHDTSNIES RVQLAKLYES 
IGMTEQALRY VNDAVLLGRQ EHRSNRRRKD TRLEELAREF KSVNVAAGPK DQSVESSSAL 
GNKGEAERTE NIQFLFKKLT QLEPKLQAGD SEATEDWLDI ADALLREFRS NRIFYPLQRN 
VVFLGYSSKA GKDALMDELQ EMANRLQESL GASTIPTDYH GISFDEWLDL FLQYALTVAG 
QGEFSEAYDT LGAAADASVW YHSRDSSRLI HVCWFTCALR LQDEETLANE ARWFIKEYQF 
VTDTYRLFAM LSCLSGDPHR SLFHSSPLMK FMLRQIKAID FTLPDHIAGA RHTKAIRESI 
YKERAALSTK DEKGEPIPAE EMDVALLVLY GHILYSGNSF YPALNYFFRA YALDDKNPAV 
LLSIGLCYIH HSMKRQSENR HFQIMQGLSF MNEYKRLRER KGTPLVERQE MEFNFARVWH 
TLGLAHLAVE GYQRVLDLGK EIQAQFQTKQ LLTPAHAANG AQADDNDADI SMPDVDSNVN 
IDVNVDRATH SVEVKPQSPQ PVIENFSREA AVALQQLYAL NGDFQSAQAV TAAWLVI