Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ANIA_00242 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Aspergillus nidulans FGSC A4 |
Kingdom | Eukaryota |
Replicon accession | BN001308 |
Strand | - |
Start bp | 4111938 |
End bp | 4115066 |
Gene Length | 3129 bp |
Protein Length | 882 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | transcription factor (Snd1/p100), putative (AFU_orthologue; AFUA_5G09250) |
Protein accession | CBF89895 |
Protein GI | 259489540 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.15453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CTTACTAACT CCTTTTTCTC TCTTATTTTC TCTCCTTTAT CTTATCTGTT TTCTATTGAA AGTCCCTCCT TGGTCAATTG AATTCACTCG GTTTTGCAGC ATGCCTCTGG AAGCTCGTGT TAAGTCAGTG CTATCTGGCG ACACTGTTGT CTTGTCGCAT GTTCACAACC CTGCACAAGA ACGTGTCCTC AGCCTTGCAT ATGTGTCCGC GCCGAGACTG CGACGAGAAG GAGATGAGGT GAGCCTTTCA TAATTCCGTT TTGCTGAAGT GTCCTGAGAT CTGTCCATGG AGGCAGAGCT GGCCTTGAGT AATGAGCAAC ACGACACGAT ATTTTGTTTC GCCCGTTCCT CTTCATGTCA TAATCATATT TCTTGCGCTC GAATCTTTAC TAAACACTTT TATTCTACAG CCCTATGCTT TTCAATCCCG CGAATTCCTC CGCGAACTTC TTGTCGGCAA GGTTGTCCAA TTTCAGGCGC TGTATTCCGT CCCGTCCTCG CAACGCGAAT ACGGAAAGAT CAAACTTCCA ACATTTGAGG TTACGTTACC GGAGATCGTC GTTCAGGAGG GATGGAGCCG TGTTCGTGAG GAAGCCGGCA AGCGAAGTGA TGACTCTGAG GAAACTCTTG CAATGCTAGA ACGGCTTCGC GCTCTGGAAG ACCACGCTAG AACCGAAGGA AAGGGTGTCT GGGGAAGTGG AAACGGCCGC ATCGAGACCC GCTATGATCT TGAAAATGCC AAATCTCTGG TGGACGAGTG GTCAGGTAAA CATCTCGAGG GTATTGTCGA GAAAGTCTTG ACTGGGGATC GTCTGGTTGT CAGACTGCTT GTTGCTCCAG AGGAGCACCT CCAGGTCATT GTTGTGGTTG CCGGCGTTCG GGCACCTGCA ACTAAGCGGG TAGGTGCTGA TGGCAAAGAG CAGCCTGCCG AGCCTTACGG TGAGGAAGCC CAGCAGTTTG TCGAATCTAG AATTCTGCAA CGCAAGGTCC AGGTATCCCT TTTGGGAGTC ACCCCGCAAG GCCAACTCAT TGCCACTGTT CTCCACCCGA ATGGAAACAT CGCAAGATAT CTTCTGGAAG CCGGTCTCGC CCGATGCCAC GATCATCACT CTCCTCTCCT CGGTGCTGAA ATGGCAGCCT TCCGCCGTTC GGAGAAGGTC GCTAAGGATG CCCGATTGGG CTTGTTCACT GGTCTTGTCG CGCCCAAGGG TCCTGCTGGC GGGGCCACTG AGCAGGATTA CGTTGTTGTC CGTGTGCTCA ACGCTGACAC CATTTTCGTC AGGAACAAGG CTGGTCAGGA GAAGAAGCTT AGCCTGAGTA GCATCCGTCA ACCCAAGCCA TCTGACCCCA AACAAGCGCC ATTTGCTGCC GATGCTAAAG AATTCCTGAG GAAGAGGATT ATTGGCAAGC ACGTAAAGGT GACCATCAAT GGCAAGAAGC CTGCGACTGA GGGCTACGAA GAGAGGGAAG TGGCCACAGT TATTCAAGGG AACACGAACG TTGCTCTTGC CCTTGTGCAA GCTGGATACG CATCGGTTAT CCGTCACCGT CAGGATGACA GTGACCGATC TCCTATTTAT GACGATCTGA TGATTGCTGA AGCTGAAGCT CAAAAGGATG GAAAGGGCAT GTGGAGCTCT AAGCCTCCTA AGACGAAGCA GTACCAAGAT TACTCCGAGA GTCTCCAGAA GGCCAAGATG GAGGTTTCTA TTCTTCAGCG TCAGAAGCGT GTCCCCGCCA TTGTCGACTT TGTCAAGTCT GGATCCCGCT TCACTGTTCT AGTGCCTCGC GAGAACGCTA AGCTTACCCT GGTTCTTTCT GGTATTCGCG CTCCTCGATC TGCACGCAAC CCTGGTGAGG CTTCTGAGCC ATTCGGTAAC GAAGCACATG AGCTGGCCAA CAGACGATGC ATGCAGCGTG ATGTGGAAAT TGACGTTGAG ACCATTGACA AGGTTGGCGG TTTCATCGGT ACGCTTTACG TGAACAAGGA AAATTTCACC AAGGCTCTTC TTGAGGAGGG TCTGGCAACT GTCCACGCTT ACTCGGCGGA GCAATCTGGT CACGCGACGG AATACTTTGC TGCCGAACAG AGGGCAAAGG AAGCACGTAA AGGACTCTGG CACGACTGGG ACCCTAGCAA GGAATTAGAG GAAGAAGAGG AGGCGACCAG CGGCAGCGCC GTGGAGACCG AAGCTACCAC ACGCCGCAAG GACTACCGAG ACGTCATGGT CACCTATGTT GATCCCACTA CCGCGCGTAT CAAGCTCCAA CAGATTGGAA CTGGCACCTC GGCGCTGACC GAGCTTATGA GCGCATTCCG ATCGTTCCAT ATCAACAAGT CAAATGACAA TAGCCTTCCT GGCCCTCCCA AGGCCGGTGA CTTTGTTGCT GCCAAATTCA CAGAAGACGG TGAGTGGTAT CGCGCCAAGA TCCGTCGTAA CGATCGCGAG AAGCAACAAG CCGAAGTTCT CTACATCGAC TACGGTAACT CAGAAGTCCT GCCTTGGTCC GCCCTCAGAC CGCTTAGCGC TCAGTTTTCC ACCCAGAAGC TCCGCCCCCA GGCCGTGGAC GCCGTTCTTT CTTTCATTCA GTTTCCCGTG AACCTCCCGC ACTACCTTGA AGAGGCGGTG TCTTATATCG AGGAACAAAC TTATAACCGC GAACTTGTCG CCAATGTGGA CTATGTTGCA CCAGAGGGAA CCCTGCACGT TACTTTGCTC GATCCTGAGG GATCGAAGAG CCTGGACCAG AGTATAAACG CGGATATTGT TCACGAGGGT CTGGCCACGG TTCCTCGCAA ATTGAAGGCG TGGGAGCGTG CTGCCGGTGA GACTTTGTCG AACCTTCGGG CTCTGGAGGA CGAAGCTAGG GAGTCGCGTC GTGGTATGCA CGAGTATGGT GATGTTGGCG AGGAAGACTA AAGGCAGTTA GCCTGAAAAC ACAGCGTTTC GTTTTGTTCA TGTACAAATA TTGCTGTTTT CTTGCGTGGG ACAACCTACA AAATGGACTA TCATTTTGAG ACTCATACGT GGTGCCAAAC TACCTCAGGA GCAGTACGAA GTATAGACCG CATAACTACC CCATAATTTC ATCAAGTTGG CCAATATGAT GACTCAGCAA AGCATTTCT
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Protein sequence | MPLEARVKSV LSGDTVVLSH VHNPAQERVL SLAYVSAPRL RREGDEPYAF QSREFLRELL VGKVVQFQAL YSVPSSQREY GKIKLPTFEV TLPEIVVQEG WSRVREEAGK RSDDSEETLA MLERLRALED HARTEGKGVW GSGNGRIETR YDLENAKSLV DEWSGKHLEG IVEKVLTGDR LVVRLLVAPE EHLQVIVVVA GVRAPATKRV GADGKEQPAE PYGEEAQQFV ESRILQRKVQ VSLLGVTPQG QLIATVLHPN GNIARYLLEA GLARCHDHHS PLLGAEMAAF RRSEKVAKDA RLGLFTGLVA PKGPAGGATE QDYVVVRVLN ADTIFVRNKA GQEKKLSLSS IRQPKPSDPK QAPFAADAKE FLRKRIIGKH VKVTINGKKP ATEGYEEREV ATVIQGNTNV ALALVQAGYA SVIRHRQDDS DRSPIYDDLM IAEAEAQKDG KGMWSSKPPK TKQYQDYSES LQKAKMEVSI LQRQKRVPAI VDFVKSGSRF TVLVPRENAK LTLVLSGIRA PRSARNPGEA SEPFGNEAHE LANRRCMQRD VEIDVETIDK VGGFIGTLYV NKENFTKALL EEGLATVHAY SAEQSGHATE YFAAEQRAKE ARKGLWHDWD PSKELEEEEE ATSGSAVETE ATTRRKDYRD VMVTYVDPTT ARIKLQQIGT GTSALTELMS AFRSFHINKS NDNSLPGPPK AGDFVAAKFT EDGEWYRAKI RRNDREKQQA EVLYIDYGNS EVLPWSALRP LSAQFSTQKL RPQAVDAVLS FIQFPVNLPH YLEEAVSYIE EQTYNRELVA NVDYVAPEGT LHVTLLDPEG SKSLDQSINA DIVHEGLATV PRKLKAWERA AGETLSNLRA LEDEARESRR GMHEYGDVGE ED
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