| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_00133 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001308 |
|---|
| Strand | + |
|---|
| Start bp | 4439179 |
|---|
| End bp | 4441625 |
|---|
| Gene Length | 2447 bp |
|---|
| Protein Length | 769 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | pre-mRNA splicing factor RNA helicase (Prp43), putative (AFU_orthologue; AFUA_5G11620) |
|---|
| Protein accession | CBF90134 |
|---|
| Protein GI | 259489671 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CGCGTCTCTA CAACTTGCTC TTTCCTCGTC ATGGTTGACC GACGCTCAGA CTCAGAAGAC
GGTTCTCGCG CTAAACGCCA GAAGATGGAT AAGTCTGGGA CTGACCCCCG GGATAATCCC
TATCTGGCTC ATATGTACGC TGATACGTCC TCTAACGGCA ACTCAAGCTC ACAGGCTGAT
AACAAGAATT CAGCCTTTGC GAAGTTGCAG CGACATAAAA CAACTGCTGC GCAGGCGCAA
AAGGTTGAAG ACAACGAGTT CAATCCGTTC ACAAATCGGC CATACTCGAG CAAGTACTTC
TCGATCTTGA AAACTCGCCG TGATCTCCCC GTTCATGCTC AAAGGTAGGT TGCCTTCCCT
TCAATGATTT CGCAAATCGC TAACGTGTGA TTGTTTCTCA GAGATGAGTT CCTGCAGCTC
TACCAGCAGT CTCAGATCCT GGTCTTCGTC GGTGAGACTG GTTCCGGAAA GACCACTCAG
ATTCCCCAAT TCGTCCTGCT TGACGATCTG CCTCAGACCC AACGCAAGAT GATCGCCTGT
ACCCAACCTC GCCGTGTGGC TGCGATGTCC GTCGCCCAGC GTGTAGCTGC AGAGTTGGAT
GTCACTCTTG GGGAGGAGGT CGGTTACAGT ATCCGTTTTG AGGATATGAC TAGTCCCAAG
ACACTTTTGA AGTACATGAC GGACGGTATG CTCTTGCGGG AGGCCATGAA CGACCATGAA
CTCAGCCGCT ACAGCACTAT TATTCTCGAT GAGGCCCACG AAAGAACAAT GTCAACCGAT
GTTCTCATGG GTCTTCTCAA GGAAGTCGTG CAGCGCCGAC CTGATCTGAA GATCATCATC
ATGTCCGCCA CTCTGGATGC ACAGAAATTC CAACGATACT TCAATGACGC ACCTTTGCTT
GCTGTCCCCG GTCGTACCCA CCCTGTCGAG ATTTTCTATA CCCCCGAACC TGAACAAGAC
TACGTGGAGG CCGCCATTCG CACTGTTCTG CAGATCCACG CCACGGAAGA CGAGGGTGAT
ATTCTTCTAT TCTTGACTGG AGAGGAGGAG ATTGAGGATG CAGCACGCAA GATCTCTCTC
GAGGGTGATG AAATGATTAG AGAGGCCGAT GCTGGCCCAT TAAAGGTCTA CACCCTCTAT
GGTAGTCTCC CTCCGCATAT GCAACAGAGG ATTTTCGAAC CCGCCCCTCC TCCACGCCGC
CCAGGAGGTC GCCCGGGAAG GAAGGTCATC GTGTCTACCA ACATTGCGGA GACTTCGCTT
ACCATTGACG GTATTGTCTA TGTTGTGGAT CCGGGCTTCT CAAAGCAGAA AATTTACAAT
CCCCGTATTC GTGTCGAATC CCTTCTAGTT TCTCCGATCT CGAAAGCCTC GGCGCAACAA
AGAGCTGGTC GTGCTGGACG TACTCGCCCC GGAAAATGTT TTCGTCTTTA CACCGAAAGT
GCTTTCAAGA AAGAACTTAT CGATCAAACG TATCCCGAAA TTCTACGCTC AAACTTGTCA
TCCACCGTGC TTGAGCTTAA GAAGTTGGGA ATCGATGACT TGGTGCATTT CGACTTGATG
GATCCTCCAG CGCCAGAGAC ACTTATGAGG GCTCTCGAGG AACTGAACTA CCTTGCGTGC
CTTGATGATG ACGGTAACCT CACCCCGCTG GGCCGCCTTG CCTCAGAGTT CCCGCTAGAC
CCTGCACTTG CGGTCATGCT TATCAGCTCA CCGGAGTTCT ATTGCTCAAA TGAGATCTTG
TCCATCACAG CATTGCTCTC AGTGCCCCAA ATTTTCGTCA GACCGGCATC CCAGCGGAAG
CGCGCTGATG AAATGAAGAA TCTGTTTGCC CATCCCGATG GCGATCATCT GACATTGCTT
AACGCCTATC ACGCGTTCAA GAGCCCTGAG GCGCAGGAGA ACCCCAAGCA GTGGTGCCAC
GACCATTTCC TTTCCTTGCG ATCTCTGCAG TCCGCCGACA ATGTACGTAT GCAACTCCTC
AGAATCATGG AACGTGAGGA ACTGGAGATG ATCTCGACGT CTTTCGAAGA TAAGAAATAT
TACGAGAATA TTCGCCGTGC TCTATGCGCC GGGTTTTTCA TGCAGGTCGC CAAGAAGGAA
AACCAGGGTA AGAGCATGTA CATGACCATC AAAGATCACC AGAACGTGCT TCTGCATCCC
TCGACTGTAC TTGCCCACGA TGCTGAGTGG GTTCTATACA ATGAATTCGT CCTCACGACG
AAGAACTATA TCAGAACCGT AACAGCTGTT AAACCGGAAT GGCTTATTGT AAGTTCCAAC
ACTCCCTCCA CTTCTTATGT TTCTAATGAA ATCTCTAGGA TATTGCGCCT ACCTATTACG
ATATTTCGAC ATTCCCAAAG GGCGATATTC GCTCTTCTCT GCTGCGAGCT GCCGAGAGAC
TCTCGCGCAA GGAGAAAATG CGTGCGGATT CTGGAAAAAG GCGTTAA
|
|---|
| Protein sequence | MVDRRSDSED GSRAKRQKMD KSGTDPRDNP YLAHMYADTS SNGNSSSQAD NKNSAFAKLQ
RHKTTAAQAQ KVEDNEFNPF TNRPYSSKYF SILKTRRDLP VHAQRDEFLQ LYQQSQILVF
VGETGSGKTT QIPQFVLLDD LPQTQRKMIA CTQPRRVAAM SVAQRVAAEL DVTLGEEVGY
SIRFEDMTSP KTLLKYMTDG MLLREAMNDH ELSRYSTIIL DEAHERTMST DVLMGLLKEV
VQRRPDLKII IMSATLDAQK FQRYFNDAPL LAVPGRTHPV EIFYTPEPEQ DYVEAAIRTV
LQIHATEDEG DILLFLTGEE EIEDAARKIS LEGDEMIREA DAGPLKVYTL YGSLPPHMQQ
RIFEPAPPPR RPGGRPGRKV IVSTNIAETS LTIDGIVYVV DPGFSKQKIY NPRIRVESLL
VSPISKASAQ QRAGRAGRTR PGKCFRLYTE SAFKKELIDQ TYPEILRSNL SSTVLELKKL
GIDDLVHFDL MDPPAPETLM RALEELNYLA CLDDDGNLTP LGRLASEFPL DPALAVMLIS
SPEFYCSNEI LSITALLSVP QIFVRPASQR KRADEMKNLF AHPDGDHLTL LNAYHAFKSP
EAQENPKQWC HDHFLSLRSL QSADNVRMQL LRIMEREELE MISTSFEDKK YYENIRRALC
AGFFMQVAKK ENQGKSMYMT IKDHQNVLLH PSTVLAHDAE WVLYNEFVLT TKNYIRTVTA
VKPEWLIDIA PTYYDISTFP KGDIRSSLLR AAERLSRKEK MRADSGKRR
|
|---|
| |