Gene ANIA_00098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagANIA_00098 
SymbolnirA 
ID
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameAspergillus nidulans FGSC A4 
KingdomEukaryota 
Replicon accessionBN001308 
Strand
Start bp4561054 
End bp4563936 
Gene Length2883 bp 
Protein Length892 aa 
Translation table 
GC content51% 
IMG OID 
ProductNitrogen assimilation transcription factor nirA [Source:UniProtKB/Swiss-Prot;Acc:P28348] 
Protein accessionCBF90203 
Protein GI259489709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.137602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGAAA AGCTCGACCC GGAACTCTCT TCCGACGGAC CTCACACGAA GTCGTCGTCC 
AAGGGTCAAG GGACCAGTAC GGACAATGCT CCAGCGTCGA AGCGACGTTG TGTGAGCACA
GCGTGCATTG CTTGCCGCAG GCGGAAATCA AAGGTAACAA GTGCCGGCCG CTAGGTTTAT
ATGCGTTCAA AGTTCTGACG GTCTTCAAGT GTGATGGAAA TCTTCCAAGT TGCGCCGCCT
GCTCCTCCGT CTATCATACA ACCTGTATTG TGACCATTCA TCAGCTATCC TCGGAAGATG
GCTAATATAT ACTAGGCGTT TATGATCCAA ACTCCGACCA CCGGCGAAAA GGAGTTTACA
AGAAGGATAC GGACACGTTA AGAACTAAGA ACTCTACCTT GTTAACTTTG ATTCAGGCGC
TGCTCAACTA TGAGGAGGAA GATGCCTTCG ACCTGGTCCG CCAAATCCGG TCCTGTGATA
ACCTGGAAGA CGTAGCGCAA TCTCTCGTAA ACCAGGAAAA GAAGTCGTCT GGTTGGCTGT
CAAATGCGGT AATACATGAA GAGAACGATA TCGCGCAGAC GGATCAATTC GAGTCTGAAT
TGGCTGGAAA GATGAGCAAC CTCGTGCTAG ACGGATCCCG CAAGTTTATT GGCGGGACGT
CAAACCTCAT CTTCCTACCA CCCGGATCGG AACTCAACGA GTTCAAGCCT GGCTTGGCTA
CTAACGGCGA TCTGGAGGGA TCCGTCACCC GGTGGACGAC AGTTACTGAT GATCAGCAGC
TTATTAGCCA TCTCTTGACA ATGTACTTTT CATGGCATTA TCCTTTCTTC ACCACTCTGT
CCAAGGAACT CTTCTACCGT GATTACTCTC GTGGAGTGCC GAGCCAGTAT TGCTCTTCCT
TGCTTGTTAA CACGATGCTG GCCTTGGGGT GTCACTTCAG CTCCTGGCCA GGGGCCCGTG
AAGATCCAGA CAACTCTGCT ACCGCCGGTG ATCACTTTTT CAAAGAAGCG AAGAGATTGA
TCCTTGACAA CGACGAGCTT GTCAACTCAA AGCTTTGCAC CGTGCAAGCT CTGGCTCTTA
TGTCCGTACG AGAGGCCGGA TGTGGCCGTG AAGGGAAAGG CTGGGTTTAT AGCGGAATGA
GTTTCCGCAT GGCATTTGAC TTGGGCTTGA ATCTTGAGTC TTCGAGCTTA CGAGATCTCA
GCGAAGAAGA GATAGATGCA AGACGCATCA CTTTTTGGGG TTGTTTCCTC TTCGACAAGT
ATGGTGCTGT CAAAACTTCA CACAGATAAA TGCTAATTGA TCTAGATGTT GGTCTAATTA
TCTTGGACGG CAGCCTCAGT TCACGACAGC GAACACAAGT GTTTCCGCAG TGGATATTCT
ACCCAACGAA GAATCAACAT TATGGTCTCC TTACAGTGAT ATGGGGCCTA GTCGGGAGTA
TGCACAACCT TCGCGGACAA GGGCAGTCGC AGACCAGATT TCCCAATTGT GTAAGATCAG
TGGAGATCTA GTGGTGTTTT TCTACGACCT TGCTCCCAAA GAAAAGCCAT CGTCCAAGCA
ACTGGAGCTA AAGAAGCTAA GTGAGATTCA TACTCGCTTA GAAGCGTGGA AGAAAGGCTT
GCCGAAGGAA CTCGAGCCGC GCGAAGGCCA GCTTCCGCAG GCGCTACTCA TGCAGTAAGT
TAGTCTAGGA ACTGAAAGCT AGCATTGTAC TTACACCATT ACAGCATGTT CTACCAACTT
CTCCTCATTC ACCTTTACCG CCCCTTCCTC AAATACACAA AGTCGACCTC CCCGCTTCCT
CAGCATGTCT CTCCCCGCAA GCTATGCACT CAGGCGGCAG CTGCTATATC GAAGTTACTA
CGGCTTTATA AACGCACATA CGGGTTTAAG CAGATCTGCA ATATCGCCGT TTATATTGCG
CATACAGCCT TGACAATCCA CCTTCTCAAT CTACCCGAAA AGAATGCACA GAGAGATGTA
ATACACGGCC TGAGACATCT CGAAGAGATG GGAGAGTCTT GGCTTTGTGC TCGCCGGACG
CTTCGTATTC TCGACATATC TGCCAGTAAG TGGCAGGTAC AACTACCGAG GGAGGCCGTT
ATCGTCTTCG AACAAACACA TGCTCGATGG GGCTCGTGGG GCCCTTGGGA CCAAGCAGCA
TCGCCTTCAA CAACCTCGGA TTCACCGCCA TCCGTCAGCT CCCAGTCCGT GGTTGCCACC
ACGGATCTAT CCCAACCTGT ATCCCAGTCT GCGGGCAATC AGCCTGCCAA TCCTTCTATG
GGTACGTCTC CGAACCTAAC ACAGCCCGTA GCCTCTCAAT ATTCTTCCAC GCCTTCTGGA
CCTGTCTCTG TATCTGCAAT GCGTGCTGTT CAACGATCTT TCAGTGCTCA ACTTGCACAC
AACGAAGCCC GACAACCTGA ACCTACGTAT CTAAGACCGG TCTCTACCAG CTATGGACCA
GTTCCGTCAA CTCAGTCTGC ACAAGAGCAG TGGTACAGCC CAACTGAGGC ACAATTCCGC
GCATTTACTG CTGCTCACAG TATGCCTACA ACATCAGCCC AATCTCCGTT GACCACCTTT
GATACACCAG AAAATCTGGT TGAGGAAAGT CAGGACTGGT GGTCTCGCGA CGTTAATGCA
CTACAACTCG GGGCCGAGGA CTGGACTCAG AATTGGAATA ATGGTCTCCC CACCACATCG
GCCGACTGGC GCTATGTGGA CAATGTCCCC AACATCCCTT CTACATCTGC GCCCGATGCC
GATTACAAGC CTCCACAACC ACCTCCCAAC ATGGCAAGAC CGAATCAATA TCCAACTGAC
CCTGTTGCGA ACGTGAACAG CAACCAAACC AACATGATTT TCCCCGGCAG TTTTCAGCGA
TAG
 
Protein sequence
MGEKLDPELS SDGPHTKSSS KGQGTSTDNA PASKRRCVST ACIACRRRKS KCDGNLPSCA 
ACSSVYHTTC VYDPNSDHRR KGVYKKDTDT LRTKNSTLLT LIQALLNYEE EDAFDLVRQI
RSCDNLEDVA QSLVNQEKKS SGWLSNAVIH EENDIAQTDQ FESELAGKMS NLVLDGSRKF
IGGTSNLIFL PPGSELNEFK PGLATNGDLE GSVTRWTTVT DDQQLISHLL TMYFSWHYPF
FTTLSKELFY RDYSRGVPSQ YCSSLLVNTM LALGCHFSSW PGAREDPDNS ATAGDHFFKE
AKRLILDNDE LVNSKLCTVQ ALALMSVREA GCGREGKGWV YSGMSFRMAF DLGLNLESSS
LRDLSEEEID ARRITFWGCF LFDKCWSNYL GRQPQFTTAN TSVSAVDILP NEESTLWSPY
SDMGPSREYA QPSRTRAVAD QISQLCKISG DLVVFFYDLA PKEKPSSKQL ELKKLSEIHT
RLEAWKKGLP KELEPREGQL PQALLMHMFY QLLLIHLYRP FLKYTKSTSP LPQHVSPRKL
CTQAAAAISK LLRLYKRTYG FKQICNIAVY IAHTALTIHL LNLPEKNAQR DVIHGLRHLE
EMGESWLCAR RTLRILDISA SKWQVQLPRE AVIVFEQTHA RWGSWGPWDQ AASPSTTSDS
PPSVSSQSVV ATTDLSQPVS QSAGNQPANP SMGTSPNLTQ PVASQYSSTP SGPVSVSAMR
AVQRSFSAQL AHNEARQPEP TYLRPVSTSY GPVPSTQSAQ EQWYSPTEAQ FRAFTAAHSM
PTTSAQSPLT TFDTPENLVE ESQDWWSRDV NALQLGAEDW TQNWNNGLPT TSADWRYVDN
VPNIPSTSAP DADYKPPQPP PNMARPNQYP TDPVANVNSN QTNMIFPGSF QR