| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_10214 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001307 |
|---|
| Strand | - |
|---|
| Start bp | 990336 |
|---|
| End bp | 992211 |
|---|
| Gene Length | 1876 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | 2-hydroxyphytanoyl-CoA lyase, putative (AFU_orthologue; AFUA_8G05230) |
|---|
| Protein accession | CBF85026 |
|---|
| Protein GI | 259486841 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00157482 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.477766 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATCA GAACAGGGGC ACAGATTATC GCGCGCAGTC TGCGCGATCT AGGGGTCACT
GTGATTTTCG GCATCGTCGG CATCCCCGTC GTCGAAATCG CAGAAGAGGC CATCAACCTA
GGGATCCGAT TCGTGGCATT CCGGAACGAG CAAGCCTGCA GCTATGCAGC CAGCGTCTAT
GGATATATGA CAGGGCAGCC TGGAGTTTGT CTTGTCGTTG GGGGCCCTGG AGTTCTCCAT
GCGTTGGCCG GAGTAAGATG CCTAGTCCCA GTCACTAGAA TAGCAGGACT AACGTATCAA
CGGTGAATAG ATTGGAAATT CCTCCGCGAA CAACTTCCCT CTTCTCGTGC TTGCTGGATC
AGCCGAGACC AGTGCTGTCA CGAAGGGCGC CTTTCAGGAG CTGGACGCCA TTTCCCTCTT
AACCCCTCAC ACGAAGTTCG CCGCGCGCGC CTCATCACTC GACTTCATCC CGGATGCTAT
TAAGAATGCC TACCGGACGT GCTGGTATGG TCGGCCAGGC CCTACATTTA TAGATCTACC
GGCCGATATC ATCCAAGGGA AACTGACTTC GCAGTTTGAA CTACCGAAAC CTGAGAACCT
GCTCGTATCG GCACCACCCA AGGCAAGCGG TGATCCAGCA TTGATATTGA AGGCTACTCA
ATTGCTGAAG GCTGCTAGCG CTCCGCTCAT CATTGTCGGT AAGGGTGCCG CATATGCGCG
CGCAGAGCTC GGAATTCGGA AATTAGTCGA CCAGACACAG GTTCCGTTCT TGCCTACACC
CATGGGTAAG GGTGTAGTTC CGGACTCACA CCCCCTGAAC GCATCCAGCG CGCGAAGTGC
CGCATTGAAA CATGCGGATG TCGTTCTCGT TCTGGGAGCG CGGCTTAACT GGATCCTGCA
TTTTGGTGAG CCGCCGAAAT GGTCTCCTAA AGTGAAGATA ATCCAGGTCG ACATCTGCGC
GGAGGAGATC GGGCGGAACG CTGGGACATC AGAGCTTGGG ATCCTAGGAG ATATAAGTCT
AGTTGTGGAT CAATTCAGGG CATCTCTTTC TAGCTGGAAA TACTCGTCCT CAGCGAAGTT
CCCATTGCTT CTCGCCGAAT CAGCCAAGAA GAATGAAGAC AAGGCTCAAA AGGCTGCCCT
TAGACAAACG CCCGCCGGCA AGCCACTTAC CTATCAACGA GCCTACCACA TCATCAAAAC
AGCACTTAAT GCCTTGACAC CCGTCGAGGA TGGAAATATT GTTTACGTCT CTGAAGGTGC
CAACACGATG GACATCTCCC GCTCCATCTT CCCGCTCTAC CACCCCCGCC AGCGTCTCGA
TGCAGGCACG TACGCCACAA TGGGCGTGGG AATGGGTTAT ATTGTCGCCG CGCACGAAGC
ATTCAATGCT AACCCCGGAG CAAGCACATC CCGCCCCAAG AAAATTGTCG CCTTCGAAGG
CGACAGTGCG TTCGGCTTCA GCGCGATGGA AATCGAAACG CTCGCCCGGT ACCGTATCCC
AGCACTGATC TTCGTCATTA ATAATTCGGG CATCTACCAC GGTGACAGTA TCTCGAAGGA
GGACTGGAAG ACACTTCAGA ATCAAACCGT GGCCAACGAC ACCAAAACAT CCGAGTCTGA
CTCTGGAACT AATGCTAAAA CTAAGGGTCT GCGCTCGACT AGTCTGCTCT ATGAGACGAG
GTATGAGATG CTTGCTACAA TGTGTGGTGG GAAGGGGTAT TTCGTAAAGA GCGAGGAAGA
GCTGGAGAGA GCCACGAAAG AGGGCTTCGT GAGTGATACC GTTACAATAG TGAATGTCAT
TGTTGAGCCC GGGATTGGGA AGGAGATTGG TTTTGCGTGG CAGAATCAGG GCAAAGAAAG
CAAGCCAAAG CTGTAA
|
|---|
| Protein sequence | MAIRTGAQII ARSLRDLGVT VIFGIVGIPV VEIAEEAINL GIRFVAFRNE QACSYAASVY
GYMTGQPGVC LVVGGPGVLH ALAGIGNSSA NNFPLLVLAG SAETSAVTKG AFQELDAISL
LTPHTKFAAR ASSLDFIPDA IKNAYRTCWY GRPGPTFIDL PADIIQGKLT SQFELPKPEN
LLVSAPPKAS GDPALILKAT QLLKAASAPL IIVGKGAAYA RAELGIRKLV DQTQVPFLPT
PMGKGVVPDS HPLNASSARS AALKHADVVL VLGARLNWIL HFGEPPKWSP KVKIIQVDIC
AEEIGRNAGT SELGILGDIS LVVDQFRASL SSWKYSSSAK FPLLLAESAK KNEDKAQKAA
LRQTPAGKPL TYQRAYHIIK TALNALTPVE DGNIVYVSEG ANTMDISRSI FPLYHPRQRL
DAGTYATMGV GMGYIVAAHE AFNANPGAST SRPKKIVAFE GDSAFGFSAM EIETLARYRI
PALIFVINNS GIYHGDSISK EDWKTLQNQT VANDTKTSES DSGTNAKTKG LRSTSLLYET
RYEMLATMCG GKGYFVKSEE ELERATKEGF VSDTVTIVNV IVEPGIGKEI GFAWQNQGKE
SKPKL
|
|---|
| |