| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_02611 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001307 |
|---|
| Strand | - |
|---|
| Start bp | 4466546 |
|---|
| End bp | 4469387 |
|---|
| Gene Length | 2842 bp |
|---|
| Protein Length | 645 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | geranylgeranyl diphosphate synthase, putative (JCVI) |
|---|
| Protein accession | CBF87199 |
|---|
| Protein GI | 259488050 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.221 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0772164 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGG AGAATATTTG GCGATATTCT CAGCCAATAG ATCCGGAGAC CGTCCGGCAG
ACGCCATCCT TCACAACATT GCCTGTCCGC GTCAATACGC GACAAGATGT TGCGAACGCG
GCAACCACCC GAGCTCTCCG TGAGTGGGAT GCAGCTCTTC AGGATGGCAT GGCCGCCAGA
GCATTAGTCT CCTTTAGCGA CCTGGGAAAC CTGGGCGCTT TTGCTTACCC CGAAGCGGAA
CCGGAAAAAT TGCATATTTT GACTTACTTG ACTGACATGG GAATGCTTCA TGATGGTACG
TAAACCTCTT GCCCTTGTAG CCAACGTGTA GGTTGTGCCT GTGAAACTGA CGATTTTTTC
ATGTCGCATA GATGGCTATG AAGCTATGGA CATGGATACA GCAAGGACGG AACATCGTGA
GCTCGGACTT CTATTCGATC CAAACAAGCC ACATCAGCCA AGCTTTAACA CTCGAGCTCC
GCGTATTAAG AAGCTTGTCT CGCAAATCCT ACTAGAGGCC ACTGCTATTG ACCGTGCGTT
GGCAATGTAC ATGTTTGACA TGTATAATAA AGGGTGGCTG GCTGTTGCTG GAGAAGCCAA
GGAGTGGCAT TTCAATTCAG TAGAAGAGTA TCAAGCATAC AGGAGAAACG ATTTTGGAGC
TACGTATGTG ATTTATTTGC GATCCACAAC TGACGCGAGG TTGAGAGAAA GCGAGCTGAC
GATGCGGTTG TTCTAGGGCT TTGTGGGCAA TGACCGAGTT CGCTGTCGGA ATACGGCTGT
CAGACGCCGA CAGGAAACTA ATCAAAACCG TTATGGAGCC CATAGAAAAG GCCGTTATTT
GGACTAACGA CTACTGGAGC TTCGACCGAG AGTATTATGA GGCTTCAGTC AATGGAAGTC
GGCTTGTTAA TCTGGTGGAG GTCATTCGTC GTTGTGAAAA TCTGTCCATT GATGATGCAA
AAGCACGGGC TCGTGAGTTA CTCATCGACA CAGAGCAAAC ATACATCCGC AACAAGGAGG
AGCTTTATGC CAACAACCCA TCAATGTCCC TTGAGCTGAA GAGATGGGTG GAAGTGGTAG
GCGCTATTGT TGGCGGTACG CATTATTGGG CAAGCAGCGC CCCCCGGCAT CGAACGTGGG
CTCACGAAGA GAGAAATATG ACCAAGTCTG CTGATGAGCT TATGCTTGAG ATTCCAGAAG
AGCATGCTTC GAGCGAGGAG TCCACCACAC CTGATTGCTT CAGCGTTAGT AGCAGCAGCT
CTCAACAGAC AAGGGAAACC GATCCATCGG ATTACGAAAG TTCGAGCAAC CAGCCACTAG
ACGTTCCGAA AGCCGACAAT GGTCCAGGGT CAAAGCAATT TAGTCAACCA CAGCGCGGTG
GAATTGAGCA GAATTGCGAA AAACAAATGG AATCACCCCA GGTGCGCCCC ACCGCGTATT
TTACGGTATC ATCTCCTTTC TAACCTGTGT ATAGACAGCG GGGCTCACTT GGTATAAACC
ATCCAATACA GCTCTTCAGG GGCCTATTGA TTACATTTGT GGGATGCCTT CCAAAGGGGT
TCGGTCAGCA CTGATAGACG CCTTCAACTA CTGGCTAAAG GTGGAGGAAG CAAAGTTAGA
AAACGTGAAA GAACTCGTCG GCTTTCTTCA CAATGCATAA TTAATTCTAG ACGATATTGA
AGATTGCTCC CCCAAACGAC GAGGTCAACC AGCAACACAT GTCCTGTTCG GCCACTCGCA
AGCAATCAAT AGCGCTAACT ACATGTTTAT TCAAGCAGTG CGAGCGACAC GCAGCTTTCA
CAATCCAGAA GCCATGGATA TACTCCTTGA AGAGTTGGAA AATCTCTATC TTGGCCAAAG
CTGGGACCTG CAGTGGAAAT ATAATCTCAC TTGTCCATCT ATCGACGACT ACACGAATAT
GATAGACAAC AAAACGGGTG GAATGTTTAG ACTTTTGCTA AGGCTACTTC AGAATGAAGC
TGGCCCTGGA GGAGGTTATG GATGCGACCA GGCACCGGGA CTCTCCCTCC TCTTGGACCG
GCTAACAACC CAATTCGGCC GTTTCTTCCA AATCCGCGAC GACTACATGA ATCTCCGTAA
CAGTTCATAC GCGCAGCAAA AAGGGTGCTG TGAGGACCTA GACGAGGGAA AATTCTCTTA
TCCAATTGTT TACTGCGCGG CGAAATATCC GGACTTCAAG GTACTCATCA GTGGTGTTTT
CCGGCAACGG CCCGCTTCAG CTACAATGAA TGTGCAGCCG TTACCGGCAG AGATAAAGCA
ATATGTTGTT GAGTTTCTAA GCTCGAGTGG AACTTTCCAG CACTGTCGAA ATCATCTAAT
TCATTTAGAG CGCTTGATAG TGAAGACAAT TGGCGAGATT GAGGATGTGA CACAGGAAAC
CAACCCTGTG CTAAGGCTGC TTTTGGAAAG ACTTAGTGTG GAACATTGTT GAATTAGGGA
GGAATTTGAA AAGGCAAAAG TGAGGAACAA GGCAGCAATC TGTTTGCGAT ATCGCCATAT
CTTTGTGCGT TTTGTTTTAT GTTCGTAGAT TATAATATGG CATTGGCCTT AGTTCAGTCT
AATATATGGT CGTTTATTGC TGCTAACTGA GAAAACGTAT TTGAGCGAAG TCGCCCATGA
CTGAGAACAT CAGTATCAAG TACGGTAAGT CCTACAGTAG CGATGCTTGG GTATCTACCT
TGTGAGTATT ACCTTGTCGG GCTCGTAACA CTTATTTCGT ACTTGACTCA ACTTCAATCA
AGTACTTATC ACTGACGCAG CTCAACCTGG CCTTTTCTCA ACCATTCCGG ACTTCTGGCA
AATGTATGGT AAACGCGTAT GA
|
|---|
| Protein sequence | MSMENIWRYS QPIDPETVRQ TPSFTTLPVR VNTRQDVANA ATTRALREWD AALQDGMAAR
ALVSFSDLGN LGAFAYPEAE PEKLHILTYL TDMGMLHDDG YEAMDMDTAR TEHRELGLLF
DPNKPHQPSF NTRAPRIKKL VSQILLEATA IDRALAMYMF DMYNKGWLAV AGEAKEWHFN
SVEEYQAYRR NDFGATALWA MTEFAVGIRL SDADRKLIKT VMEPIEKAVI WTNDYWSFDR
EYYEASVNGS RLVNLVEVIR RCENLSIDDA KARARELLID TEQTYIRNKE ELYANNPSMS
LELKRWVEVV GAIVGGTHYW ASSAPRHRTW AHEERNMTKS ADELMLEIPE EHASSEESTT
PDCFSVSSSS SQQTRETDPS DYESSSNQPL DVPKADNGPG SKQFSQPQRG GIEQNCEKQM
ESPQLFRGLL ITFVGCLPKG FDCSPKRRGQ PATHVLFGHS QAINSANYMF IQAVRATRSF
HNPEAMDILL EELENLYLGQ SWDLQWKYNL TCPSIDDYTN MIDNKTGGMF RLLLRLLQNE
AGPGGGYGCD QAPGLSLLLD RLTTQFGRFF QIRDDYMNLR NSSYAQQKGC CEDLDEGKFS
YPIVYCAAKY PDFKSPMTEN ISIKYAQPGL FSTIPDFWQM YGKRV
|
|---|
| |