| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_01777 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001307 |
|---|
| Strand | - |
|---|
| Start bp | 1798665 |
|---|
| End bp | 1801502 |
|---|
| Gene Length | 2838 bp |
|---|
| Protein Length | 889 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | PHD finger domain protein, putative (AFU_orthologue; AFUA_6G09000) |
|---|
| Protein accession | CBF85543 |
|---|
| Protein GI | 259487122 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.0528439 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGTA AGCTCAGTAC TATACGCTGG ATGTCTTGCG CCAACCACAT TGTCCTTGTT
TAGGCGACTA GAACTCCAGC TATACCCCTC ACGTGGATTA GTGAGCTAAC TCCAGCGCCA
GATGAACCGC GTCGCTCCGG TCGCTCGACC AAGGGCCAGC ACAAGAGCCT CGACATGGTC
AACGAAACGC CAACAAAGAA AACGAAAGCT AAAGCGCAGC CCAGAGATAA ACCCCCGAAA
CCCTCCGCAG AGCCTACCCC CGCGCCTAGC GAGGAGGAAG AGATTATCCG GTGCATCTGC
GGCGAATATG AGGAAGAGGA AGACATCGAG CGAGATATGA TTTGCTGCGA TCAGTGTTCA
GCATGGCAAC ATAATGATTG CATGGGTTTG ACATTCGCGA AGGGCGAAGT GCCCGATCAG
TACTTCTGCG AGCAGTGCAA GCCCGAAGAC CATCCGGTGC TCATGGACAA GATAGCAAGA
GGCGAGAAGC CATGGTTAGA GGTAGCGGAA CGAAGAAGAA AAGAAGCTGA AGAGTTGAAA
CAGGCACGAC GCAAGAAGGG AAGGAGAGGA GGCAAGAGAG GCAGACCAAG CGAGCCGAAG
GAGCCGAAGC CTGAGAAGAG CACACCTTCT CGTACACCGG CACCCCGAGC GTCAGGTACT
CCTGCCGCTG AACCACCAGC GCCTGTGATC GCTACCCCAG CTCCCGAGAA AAATAGTCAT
TCGCCTGAGA AGCCACCATC CAGTTCTCAG AAGCGAAAGC TGAGTGAACA GGAGGTATCG
ACGCCGGAGT CGGTAAGTAG TTACATTCCC CATCAACGCT AGACTGAAAC TCTAACTCAC
ATCAAGGGCC CCAAGACGAA ACAGGCAAAG ATTTCGCCGC CTGCTGCAAG CCCGGCACCT
CACGTCAACC AGTCGCCAGA GGATAAAGAG CCAGTTGGCC AGGATACTAA TCAAACGCCG
GCCGCGGACA CTACGAAGAC TGAACGACTG AAGACTCTTG AAGATATCAC CAATCCGGCT
AGGAGGAATG CTGCTAGCGC GCTAACTAAA GTGTTTGTGG ACCAGATCTC CAGTGCCCTG
GCGGGAGGGT CTTTCAAAAT GTCTGAAGGC AAGACGGGGG AGGAAGTTGG TCAGCAACTT
GGCATCTCAG TCGAGGAGGC TTTGTATCAA AATCTAATGG GGGGAGGTGG AGAGGCTACC
TCAGAAGCTT ATAAGATACA ACTGCGGGCG ATTTTGTTCA ACGTAAAGAA GAACCCTTCT
CTACGGGATC GTCTGCTCGT AGGTAGTTTA ACTCCTGATG CCCTCTCTAG AATGAGCTCC
CAAGAGATGG CAAGCGAGGA GCTACAACAG AAAGATGCTG AGATCAAGCG AGAGGCTGAA
AGACAGCACA TGATCATTCA GGAACAAGGG CCCCGGATTA GGCGAACCCA TAAGGGAGAA
GAACTCGTTG AGGATGATCA GACTAATGTT TCTACTGAGC CTGTCTTCTC AAACATTCCT
CGTCGCGTTA CCGAGACGGA TGGGAGTCCG GCGGCGCAGA GTCCAACTAG TCCAAGTGCT
AAGCAGCCAG AGACTGACGG CCATAAGGTC AAGACAGACG CTACACCAGC TGAACCCACG
CCTCATGACG AACATTTCCC GACCCGGAGC CATTCTCCTG GCGCCGGTCA GGACCAAGTC
TTCCCGGAGG TGGCCACACA CATTAGCCAG CCAATACCCA CTGGCAACGT CCAGGCCGAT
GCAGAGATTG ATCAGTTGTT GAAAGACGAC GACGAACCCG AGTCTCCACC ATATTCACCG
AAGGACCACC ACGATGAGGG AGCTGTCTGG CATGGCCGAG TCGTCATGAA CCCCGTCGCA
GAGTTCTCGT CGTTTGCGAA GCATGTCGCG GGAGCAGACT TGAGTGGAAG AATTCCTTGG
AACGACCTCA TACCATCTAC ACTGCTGATC GATGGGAGAA TCAAAATTCA ATCCGCCGGA
GAGTACCTAT GTGGCTTGCG GTTCAGTCAA TCAACAGATG TCTCGGTCGT CGCCATAAGC
AGTCCTGACT CCTCCAAGGA CAAGTCTAAT TTTGACAAAC TGTTTGACTA CTTCCAGGGC
CGTGAGCGAT ACGGCGTTAT GGGCAAGCAT CCTCTAGAAG CAGTCAGGGA TACCTACCTC
ATCCCCATCG AGGCCGGTTC AACGAAGAAG CCCGAGTTTA TCGAGCTGCT AGAGAACAAC
GCACTCGAGG ATCCAACCCC AGAACGCCTT TTCCTTGTCG TATTCGCCGT GAAGACAGGC
GAGTCGAACC CACCATCCGT GCAACCCCCA TCGCTGCACG CAAGCATGGA ACCTGCGGCT
TCAGCAAGTC CGTTAACAGT CACCTCCGGC ACACCCCAGC AACCCTTCGC AACTCCCGGC
CCTCGGCATT TATTGCAATA CCCTCAAACA CCATCACCCG CATTCCCCGG TGCATCCCAC
GCAACGGCTC CATATTCCCA GCCACAACCA CAGCCGCAGA TCCAGCATCA ACAACCACCT
CCAAAAGCCA CGCAGTACAA CTCATCATTA CAACCTCAGC TGCCAACAGA GCCTACCGGT
CTCCCGGCCG CCATTCAGGT CTTAGGAGGC CATGCAAATA CCCCCGCGAT CCAGGAGCTC
CTCCAGAAGG CGCCAACCAT CACTGTGACA CAGCTGAACG TCGTTCGCGA CATTCTTGTC
CGGCGTCCCC AGGCAGCGGC TGATTATACT ACCTTAATGG ATGAATTACT TGGAGAATCA
ACGACCAGAA CAAATGGGAG TGGAACTGGG AGTGGGAACG GTCATCCGCC GCCACAGCAG
CAGCAGCCGG CGCAGTAG
|
|---|
| Protein sequence | MADEPRRSGR STKGQHKSLD MVNETPTKKT KAKAQPRDKP PKPSAEPTPA PSEEEEIIRC
ICGEYEEEED IERDMICCDQ CSAWQHNDCM GLTFAKGEVP DQYFCEQCKP EDHPVLMDKI
ARGEKPWLEV AERRRKEAEE LKQARRKKGR RGGKRGRPSE PKEPKPEKST PSRTPAPRAS
GTPAAEPPAP VIATPAPEKN SHSPEKPPSS SQKRKLSEQE VSTPESGPKT KQAKISPPAA
SPAPHVNQSP EDKEPVGQDT NQTPAADTTK TERLKTLEDI TNPARRNAAS ALTKVFVDQI
SSALAGGSFK MSEGKTGEEV GQQLGISVEE ALYQNLMGGG GEATSEAYKI QLRAILFNVK
KNPSLRDRLL VGSLTPDALS RMSSQEMASE ELQQKDAEIK REAERQHMII QEQGPRIRRT
HKGEELVEDD QTNVSTEPVF SNIPRRVTET DGSPAAQSPT SPSAKQPETD GHKVKTDATP
AEPTPHDEHF PTRSHSPGAG QDQVFPEVAT HISQPIPTGN VQADAEIDQL LKDDDEPESP
PYSPKDHHDE GAVWHGRVVM NPVAEFSSFA KHVAGADLSG RIPWNDLIPS TLLIDGRIKI
QSAGEYLCGL RFSQSTDVSV VAISSPDSSK DKSNFDKLFD YFQGRERYGV MGKHPLEAVR
DTYLIPIEAG STKKPEFIEL LENNALEDPT PERLFLVVFA VKTGESNPPS VQPPSLHASM
EPAASASPLT VTSGTPQQPF ATPGPRHLLQ YPQTPSPAFP GASHATAPYS QPQPQPQIQH
QQPPPKATQY NSSLQPQLPT EPTGLPAAIQ VLGGHANTPA IQELLQKAPT ITVTQLNVVR
DILVRRPQAA ADYTTLMDEL LGESTTRTNG SGTGSGNGHP PPQQQQPAQ
|
|---|
| |