Gene ANIA_01746 details

Gene Information

• Locus tag: ANIA_01746
• ID: 0
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Aspergillus nidulans FGSC A4
• Kingdom: Eukaryota
• Replicon accession: BN001307
• Strand: +
• Start bp: 1726720
• End bp: 1732948
• Gene Length: 6229 bp
• Protein Length: 1820 aa
• GC content: 51%
• Product: ubiquitin-protein ligase Ufd4, putative (AFU_orthologue; AFUA_6G08880)
• Protein accession: CBF85486
• Protein GI: 259487091

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0719286
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 45
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCCTCCA GAATCACTCG CTCGGCCGCG AGACAAGCTG CAGATTCTCC CCCGCCCGCC 
GGTTCCGGTC CCTCTTCTAC ATCCCCCGCC GCTGGTTCGG CCCCATCTCG AAAGCGAAAG 
GCTCCCGCAC GCCGCGGTCA GTCACCGGAC TCCTCGGAGC GGCCAAATAG TCATCAATCT 
CCCCATCGAA AGACCAAGCG ACAACGGCGT GCACCTTCGC CACGAGCGGC AAACGCCTCT 
GCTGCAGCTT CTCGTCGTGG TACCCGAAAC CGCCCAACTA TGTCACACCC TGGGTAGGCT 
GGATCTCTCT GGCGCGGAAG ATATACGTTT ACTGATTGGT TTCTGTTCGC AGTCCATCGT 
CACACCCGGC GGAGGAATCT TCGAAGAAGC CGGCCTCGCC CCCGCAACAA AGAAGGAAAT 
CTAGTCGACA TGGGAAATCG GCTCAAGGTA AGATTTACAT GAGCAGGAAC TTTTCACCTT 
CCGCTTGCTG TTGTTAGGAT GCGTCTATTT ACTGAAATTC TATGCGAAAG ACCGATCTTT 
AGCTACTCAG TCACCTCCCC CGAACCGGCA AAAGAAGCGC TCCAGAACTC GTCCAGATGT 
CGTTATGAAA GAGGCAGATG ACGAATTAGA GGAACGGGAG AAAAGCGAGG AACATGAGGC 
TTCCCCACCA AGTGACAGCA ATGATGGCAC GAACCCTTCA GGTCTCGACG ATGAGGACGA 
AGAGGAAGAT GATGGAGATC TTTTTCATAA CAGTCTGTTC GGAGCGCGAG GCTCCCTTGG 
ACTCCAGAGT ACTCTTCGTG CCCTTAGCGG TATGATGTCG GGCATGTCAT CCCGCCTACG 
GGATATCCTC CAAAATTTGA GAATGAAGGA TGACCCGTCA GTTCAACTTA TCGCCCTTCA 
GGAGCTTTCA GATCTGTTAC TTGTATCGAA CGAAGACAAC CTATCTGGCC AGTTTTCTCC 
TGATCCTTAC GTGAAGGAGC TGGTATCTCT CATGCAACCA AATGATTTTG GGGAAGAGAA 
TCCGGAAATA ATGCTTCTTG CGTGCCGTTG TTTGGCTAAC CTCATGGAGG CCTTACGCGG 
CTCTGTGGCC AATGTCGTTT ATGGCGGCGC TGTACCGATC CTGTGCCAGA AGCTACTGGA 
CATTCAGTTC ATTGACTTGG CTGAGCAGGC TCTCAGTGTA TGTCCCTTGC ATTTTTCTTC 
TTTTACTCTT GTGCTTCGTG CCGTCTTCCG TTGGTTTTTG ACAGTACATC GCTGACCTTA 
CGACAGACAT TAGCAAAGAT TTCGGTGGAC TTCCCGGCGT CCATTGTACG AGAAGGAGGC 
TTAACAGCAT GCTTAACATA CCTTGACTTT TTCCCTACGA GTACCCAACG CACCGCAGTA 
ACAACGGCCG CCAATTGTTG CCGGAATCTG CCGCACGATT CCTTCCCCGT TGTGCGAGAT 
GTCATGCCCA CCCTCCTGAA CGTTCTATCT AGCAATGATC CGAAGGTCGT TGAACAAGGC 
TGCCTATGTG TTTCTCGGAT AGTGGAAAGC TTTAGACACA AACCAGAGAA GCTTGAGGAG 
CTTATTAGCC CGGAGATGCT AAAGGCGGTC CTTCGTCTGC TGCTGCCAGG CACCACAAAC 
CTCATCGGAC CGCACATTCA TACCCAGTTT CTTCGAGTTC TGGCAATCAC GTCGAAAGCT 
AGCCCCCGGC TGTCGGTAGA ACTGCTGAAA ACGGACGTAG TCGACACTCT CTACCAGATC 
TTGACTGGAG TCTCGCCACC AGAAAACATT GATGACCAAG CTATCAAGAT GGATAGCGTA 
CTTGTGATGC AGGCTTTGAT TCACCGGCCG AAGGAGCAAG TTACCGAAAC ACTGAATGTT 
ATTTGTGAGC TCCTACCAGG TGTTCCCGAG CGTCCAAACT CGCATGACGC TGGTAATCCC 
GAGGTCGCTG CAACATCGGG GTCCAAGCCA TCCTCATCGA AGGGGTTAGC TGAGAAACGA 
CGGTCTTTGC TCATGGGCTG TAAATCTGAG CTGAGACGGT TCGCCTTGGT CTTGCTCCCC 
ACACTCACTG ATGCGTTTTC TAGCACGGTC AACCTGGAAG TACGCCAAAA GGTTCTTGTG 
GCGCAGCTCA AGATGTTGCA AAATCTGGAT CCTGCTTTGA TTGAGGAGGC TCTCCGATCA 
GTGCAATATG CGTCCTTCTT GGCGGCCATT TTGTCTCAGA AGGATCACCC TTCGCTAGTG 
TCATCAGCAC TCCGCTGCGC AGAGCTACTT TTCCAGCGGC TGGAGCATGT TTACCAACAC 
CAGTTTCATC GCGAAGGCGT GATATCAGAA ATTGCCGAGC TTGCAAAAGA ACCGTTATCA 
ACTGAGAAGG ACACGAAGCC TTCCCGCGAC TCGCCAGCTG CTTCAATTAT GGACACCTCA 
GAAGACACGC GCCAGGATAA GAGCTCCATT GTGCGCCCAG CCGGTCACCT TGGGACAAAT 
CCGGATGATG AGGAGAGCCA AGATGACGAT GATCGTGACA GCGAAGACGA GGATGCGAAT 
GATTCTGAAG AGAATGATGA AGACCAGGAT GAAGATAATG ATGATATCTC GGATTCTGAA 
ACTTCGTCGT CTTCTGCTCG GGGACGTTCA TCAAGGTTGG AGGATGCGAT GCATGATTCA 
GTCATTCGTC ATGCACGTGC TTTCATGGAG CAGTATGAAT CCAGTCAAGG AGCAGAAATG 
CGTGAGAAGG CTTTGGAGAC TCTCAACGAA CTACAAGCGC TTGCTGCCGA AATTGAAGCC 
TGCTATTCCG GCCCCGGTGA TTATGGGGAG GGGATTGACC TTTTCCGCAA ATTGGCAAGC 
TATTTTGAAG GCGATGCGTT GGAAAGTATC ACCAGTTCGG AACTCCTCAA CTCCGGGATC 
ATTAATACCT TGCTCGCTGT ATTTGACGAT TTCAATTGTG AGTGATTCGT CTTCTAAAGC 
TTGATTTTTT GCGCTAACTG GTCTTATATA GCCACCCCCA TGCGTGAGGC TCGCAGCGCC 
TTCCTTCAGG CGTTCATGGG CTCGACTATT TCCGAAAAGG CACAAAGCCA GAGCACGGCA 
ACGACGCGCT TTGGGGTGTT GGTAAATAAA CTGCAGGATC TTCTTAGCCG GACAGAGCAT 
TTCGAGGTGA TGACTGTCGG CCACAATTCA CTGGAAAACA CGCGCAACAA TGCGGCCTAC 
ATGCTTGGAA AACAGCTCCG GCTGAAGTTA GTTGCTGATG AAGATTCTGA TATACCCCGC 
TCCTACAGAA ACATCATGGT TTCTATTCAC GCCATTGCAA CTTTCAAGGC CCTGGATGAT 
TTCCTCCATC CCCGAATTGC CCTTTCCGAC AGGCCGAAGA CATCTCGTAG CCGTGAAACA 
ATCTTGTCGC AGATTGCGAA TGCAGCGCGT CTCAGGGATC AGCTGGCCGA AAATCACAAC 
TCCGACGCTA GCGACTTTTC ACGGCCTTCT GGTAGTAGTA GGCCCGCCAA TAGATCCACT 
ACTACTGAGT CTAAGGCCAC CGCGAAGGAG AACTCTGCTG GTGGACCGGA CGTAACCCCA 
AGATCTAAGC GGTCTCAACC GCAGCCTGAT GACAACGGCC GTGAGGATGA ACCACTGGAG 
TGCGCTGACG AGCGCCACTT GAGTGAGGAC GATAATGATG ACGATGTCGA GGGGGATGAT 
GAAGAGCTAA ATGCCATTGT GGACGATCTT GAGGAAGAAA TGTCTGATGA GAACGTGCAT 
GATCCATCCG CTGTAAACAT GGAGGTGGCA TCATCAGGCA AAGTTACTGC CCGCAAGGAA 
GACGGCACTC GCGTATCTAC ACCGTCGCAA TCGACACCCG TGTCCAAGTC ATCATCCGGG 
CCCCGCCGGT CTTCATTAAG TTCAGCGGGT GCTGGCTCTT TGGGCATGGC TGGCCGCCCG 
TTTTCTTATG CTGCCGCCAT GGCTTCGGCC CCATCTGACT GGCACATTCA GTTCAGTATT 
GACGGCCAGC CTGTTTCCAG TGACACTACG ATCTACCGTG CTGTTCATCA TAACCGTCGC 
CACTTGGACC CTAGCGGACG GAATGTGTGG TCCGCAGTTC ACACAGTTAG CTTTCGACGT 
GTACCGGGGC CGCCACCAGC AGAGCCGTCT ACGGTATCCA CCAACGCATC CGGATCCAAT 
CCACAAGACA ATAGCAGCGG TATGCCGTCC TCTCTCAATC AAGACCATAT CACATCCTCG 
ATCTTGCGCC TTCTTCGTGT CCTACATGGC ATGAACACAA CTCTCGACGA TATACTCGCG 
GAGACCAAAG ATCTTATCGC CCTCAAGCCT GAGCCATTGG CGCAGTTTAT CAACACGAAG 
CTCACCGCAA AACTTAATAG ACAGCTGGAG GAGCCTTTGA TTGTTGCAAG CAGCTGTCTG 
CCTGATTGGA GCGAAGACCT TGCGCGATCC TTCGCCTTTT TGTTCCCTTT CGAGACCCGG 
CATCTATTCC TTCAATCTAC CGCCTTTGGA TATTCGCGGG CCATGATGCG ATGGAACAAC 
TCTCAGGGAG ATGATAGTCG TCATGATCAG CGGCGAGATG ATCGGCCAAT GCTGGGTCGT 
TTGCAGCGAC AAAAAGTACG GATCTCAAGA AGTCGTATTC TCGAGTCAGC CATGAAAGTC 
ATGGAACTTT ACGGCTCCTC TCCCAGTGTG CTTGAGGTTG AATATTTTGA AGAAGTTGGA 
ACCGGCTTAG GTCCCACTCT TGAGTTCTAT TCGACGGTCT CCAAGGAGTT TTCGAAGAAG 
AAACTAAAGA TGTGGCGGGA AAACGACTGC GGTGATTCCG AAGAATACGC GTTTGGTACT 
CGGGGTCTGT TCCCTGCACC GCTGAGCGAA GAACAGCTCG CGTCAGAATT TGGCAAAAAG 
CAGTTGCAGT TGTTCAAAAC CCTTGGGAAA TTTGTCGCTC GCTCAATGTT GGATTCGAGG 
ATCATAGACA TCTCGTTCAA TCCCGCCTTC TTCCGTATCG CCGACACCTC TTCCCCAGTA 
GCCCCTTCAC TCGGTACAGT TAAAGCAGTG GATCAAGATT TGGCCAAATC TCTACTGTTG 
CTGAAACGCT TCGCTAATGC CAAAAAGGCC TTGGAGGCAA AGAACCTCCC TAAGGCCAAG 
AAGACGCAGG CTCTGATGGC GATTGAGGTC GATGGAGTCC ATGTCGAGGA CTTGAGCCTG 
GATTTCACAC TTCCTGGATA TCCTGCAATT GAGCTCATCA AGAATGGCTC GAATATCCCG 
GTTACGATTG AAAATGTTGA CGTGTATGTC GACAGAGTTG TGGACATGAC CTTGGGCAGT 
GGCGTACAAG CACAGGTAGA AGCTTTCCGC ACGGGCTTCT CCCAAGTCTT CCCCCATTCC 
GCTCTACAGA CTTTCACGCC GAATGAACTG GCGATGTTAT TTGGTAGAGC TGAGGAAGAC 
TGGTCAATTG AGAGTAAGTC TTCATTCAGA CTAGACAAGC TTATTATACT AACGTTATCT 
TTAGCCCTGA TGGACTCTAT AAAAGCGGAT CACGGCTTCA ACATGGACAG TCGCAGCGTG 
CGCAACTTGC TACAGACGAT GAGTGAACTA GACACGCAAC AACGGCGTGA CTTCCTTCAA 
TTTGTTACTG GGAGCCCCAA ACTGCCTATT GGAGGTAAGC TTAGACACGA AGCACGCAGT 
TATCTGAGGA CTCCATTTAC TAACCATGCT CTAGGCTTCA AGAGTCTTAC GCCGATCTTC 
ACCGTCGTCT GTCGCCCGAG CGAGCCGCCC TACCTGCCCG ACGATTACCT TCCCAGTGTC 
ATGACTTGTG TAAACTACTT GAAGTTACCC GACTACAGCA GTCTGGACGT CCTCCGGGAG 
CGTCTATCTG TGGCGATCAA GGAAGGACAA GGCGCATTCC ACCTTTCGTA ATGGGGTTGT 
TGATGCTCAA GCCACTATTC CCCTAACCTG GAATCTTTCG GCAAGTGGAA CTGTGGCTAC 
GAGGCAGATA TGGCGACCCG ACACGGAATA AAAAAAAAAC AGCAAGAGAG AATGCAATGC 
CCAGGGATGA ACGATGATGA ATGTTATACC TGATCTCTTC TCACCTCCGA AACTTCGGTA 
AATTATGATG AACGCATGGG TGAATTTGTT TTGATTGGCG AGTTTCTTGC ATTCGGGTGT 
CTTTTCATTC ATTCTTTAAC GCCTTGCTCA GTCTTAAGCT TGGGAAGGAG TCCAAAAGGG 
GTATTCAATA GCTATCTAGA TAGAAATGCT AGTTCTTCAA CCTGTATTG 

 

Protein sequence

MSSRITRSAA RQAADSPPPA GSGPSSTSPA AGSAPSRKRK APARRGQSPD SSERPNSHQS 
PHRKTKRQRR APSPRAANAS AAASRRGTRN RPTMSHPGPS SHPAEESSKK PASPPQQRRK 
SSRHGKSAQA TQSPPPNRQK KRSRTRPDVV MKEADDELEE REKSEEHEAS PPSDSNDGTN 
PSGLDDEDEE EDDGDLFHNS LFGARGSLGL QSTLRALSGM MSGMSSRLRD ILQNLRMKDD 
PSVQLIALQE LSDLLLVSNE DNLSGQFSPD PYVKELVSLM QPNDFGEENP EIMLLACRCL 
ANLMEALRGS VANVVYGGAV PILCQKLLDI QFIDLAEQAL STLAKISVDF PASIVREGGL 
TACLTYLDFF PTSTQRTAVT TAANCCRNLP HDSFPVVRDV MPTLLNVLSS NDPKVVEQGC 
LCVSRIVESF RHKPEKLEEL ISPEMLKAVL RLLLPGTTNL IGPHIHTQFL RVLAITSKAS 
PRLSVELLKT DVVDTLYQIL TGVSPPENID DQAIKMDSVL VMQALIHRPK EQVTETLNVI 
CELLPGVPER PNSHDAGNPE VAATSGSKPS SSKGLAEKRR SLLMGCKSEL RRFALVLLPT 
LTDAFSSTVN LEVRQKVLVA QLKMLQNLDP ALIEEALRSV QYASFLAAIL SQKDHPSLVS 
SALRCAELLF QRLEHVYQHQ FHREGVISEI AELAKEPLST EKDTKPSRDS PAASIMDTSE 
DTRQDKSSIV RPAGHLGTNP DDEESQDDDD RDSEDEDAND SEENDEDQDE DNDDISDSET 
SSSSARGRSS RLEDAMHDSV IRHARAFMEQ YESSQGAEMR EKALETLNEL QALAAEIEAC 
YSGPGDYGEG IDLFRKLASY FEGDALESIT SSELLNSGII NTLLAVFDDF NSTPMREARS 
AFLQAFMGST ISEKAQSQST ATTRFGVLVN KLQDLLSRTE HFEVMTVGHN SLENTRNNAA 
YMLGKQLRLK LVADEDSDIP RSYRNIMVSI HAIATFKALD DFLHPRIALS DRPKTSRSRE 
TILSQIANAA RLRDQLAENH NSDASDFSRP SGSSRPANRS TTTESKATAK ENSAGGPDVT 
PRSKRSQPQP DDNGREDEPL ECADERHLSE DDNDDDVEGD DEELNAIVDD LEEEMSDENV 
HDPSAVNMEV ASSGKVTARK EDGTRVSTPS QSTPVSKSSS GPRRSSLSSA GAGSLGMAGR 
PFSYAAAMAS APSDWHIQFS IDGQPVSSDT TIYRAVHHNR RHLDPSGRNV WSAVHTVSFR 
RVPGPPPAEP STVSTNASGS NPQDNSSGMP SSLNQDHITS SILRLLRVLH GMNTTLDDIL 
AETKDLIALK PEPLAQFINT KLTAKLNRQL EEPLIVASSC LPDWSEDLAR SFAFLFPFET 
RHLFLQSTAF GYSRAMMRWN NSQGDDSRHD QRRDDRPMLG RLQRQKVRIS RSRILESAMK 
VMELYGSSPS VLEVEYFEEV GTGLGPTLEF YSTVSKEFSK KKLKMWREND CGDSEEYAFG 
TRGLFPAPLS EEQLASEFGK KQLQLFKTLG KFVARSMLDS RIIDISFNPA FFRIADTSSP 
VAPSLGTVKA VDQDLAKSLL LLKRFANAKK ALEAKNLPKA KKTQALMAIE VDGVHVEDLS 
LDFTLPGYPA IELIKNGSNI PVTIENVDVY VDRVVDMTLG SGVQAQVEAF RTGFSQVFPH 
SALQTFTPNE LAMLFGRAEE DWSIETLMDS IKADHGFNMD SRSVRNLLQT MSELDTQQRR 
DFLQFVTGSP KLPIGGFKSL TPIFTVVCRP SEPPYLPDDY LPSVMTCVNY LKLPDYSSLD 
VLRERLSVAI KEGQGAFHLS