Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ANIA_01711 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Aspergillus nidulans FGSC A4 |
Kingdom | Eukaryota |
Replicon accession | BN001307 |
Strand | + |
Start bp | 1637218 |
End bp | 1638849 |
Gene Length | 1632 bp |
Protein Length | 511 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | nonsense-mediated mRNA decay protein 3 (AFU_orthologue; AFUA_2G16750) |
Protein accession | CBF85414 |
Protein GI | 259487052 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.687985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATCG ATGTTCCCGT GCCTATGGCA CCGCAGGCTG ATGGTGCCAG CGAGATCCCG ACGTAAGCAC CTCTTCCTTC CATTCGCAAA GGTCTAATCA ACTAACAAGG TTCAAGAACG CTCTGCTACA ATTGCGGGGC TCCGTTGGTT GGGACGACGA TATGCCCTGA TTGCATGAAA CTTCAGATCG ATATCTCACA GGGCATCCAA CGAGAGGCAG TTCTAAACTT CTGTCGCGAT TGTGAGCGCT GGCTCTTACC TCCGAACTCA TGGCAAGTTG CGGCCCTCGA GTCGCGGGAG TTGTTGGCGC TTTGCTTGAA AAAATTAAGG GGACTGAACA AAATTCGAGT GATCGATGCG GGATTCATCT GGACTGAACC ACACTCGCGG AGAATCAAGG TCAAGCTCAC AATTCAAGAC TCTGTGTCCG ACGGTGTTAT CCTCCAACAG ACTTTTGAGG TCATATATAT TGTCATGTAC CAGCAATGTC CCGAGTGCGC AAAGTCATAT ACCCCCAACA CGTGGCGGGC TTCCGTCCAG GTTCGACAGC AGGTTCTTCA CAAGCGAACC TTCCTTTACC TCGAACAGCT CATCCTCAAG CACAAGGCAC ACCAAAATAC CATCAACATC AAGGAGGCCA AGAACGGAAT TGATTTCTTC TTCGCCCAGC GAAATCATGC GGAAGCGTTC ATCGATTTTC TTCATTCTGC GGTGCCCGTG GAGGTCACAA AGTCACAGCA AATCATTTCC GAAGATATCC ACACCTCGAC CAAATCATAC AAATTCACCT ACTCTGCCAA GATTGTGCCT ATCTGCAAGG ACGATCTAGT TGCCCTACCG ATTAAACTCG CAAAGCAGCT TGGCAACATA TCACCGCTGC TTCTCTGCAA CCGAATTGGT ACCTCAATTA GTTTCCTGGA TCCCAACACA CTTCAGAGCG CCGACCTAAA TTCCCGGATA TACTGGCGAT CACCGTTCAC ATCTCTAGCA GAAGCGAAAG ATCTTGTTGA ATTTATTGTC TTGGATGTAG AGCCAACAGG GCATTCCAGG GGGAAATGGT TCCAATCTGA GGTAACGGTC GCCCGAGCGT CCGACTTCAG TGGCGACAAA CAATACTTTA CGAGGACGCA TCTCGGCAGC ATCATCCACC CGGGCGATTC CGTGCTAGGT TACATGTTGA CTGGAACGAA TTTCAACAAC GCCCAGTTTG ATGAAATCGA GTCGTCCAAT ACGTACAGTT CGACCATTCC GGACGTCATT CTCGTCAAGA AATTCTACCC TAGACGCTCG AAGCACACCA AGCGCAACTG GAAGCTCAAG CGCATGGCCA CAGAACACGA CCCCTACCTT CTACCCAACA ATAAAGAATC AGTGGAGAAT GACTTTGAGA TGTTCTTGCG CGATGTTGAA GAGGACCAGG AGCTACGGGC GACGTTGGCG TTATATAAGA ACAAGAAGAA GGACGACACG ATGAGTGTGG CGGACACCGA CATGATGAAC GACGACGACG ATGAAGTTCC CAAGATCAGT ATGGACGAGT TACTGGACGA CTTTGATGAC CTCGAAATTG ACGACAACAT GCAAGATTGA ACGTACATAG TATGAATCAA AAGCGGCAAT TCCAGCCCCA CA
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Protein sequence | MDIDVPVPMA PQADGASEIP TTLCYNCGAP LVGTTICPDC MKLQIDISQG IQREAVLNFC RDCERWLLPP NSWQVAALES RELLALCLKK LRGLNKIRVI DAGFIWTEPH SRRIKVKLTI QDSVSDGVIL QQTFEVIYIV MYQQCPECAK SYTPNTWRAS VQVRQQVLHK RTFLYLEQLI LKHKAHQNTI NIKEAKNGID FFFAQRNHAE AFIDFLHSAV PVEVTKSQQI ISEDIHTSTK SYKFTYSAKI VPICKDDLVA LPIKLAKQLG NISPLLLCNR IGTSISFLDP NTLQSADLNS RIYWRSPFTS LAEAKDLVEF IVLDVEPTGH SRGKWFQSEV TVARASDFSG DKQYFTRTHL GSIIHPGDSV LGYMLTGTNF NNAQFDEIES SNTYSSTIPD VILVKKFYPR RSKHTKRNWK LKRMATEHDP YLLPNNKESV ENDFEMFLRD VEEDQELRAT LALYKNKKKD DTMSVADTDM MNDDDDEVPK ISMDELLDDF DDLEIDDNMQ D
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