Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ANIA_01448 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Aspergillus nidulans FGSC A4 |
Kingdom | Eukaryota |
Replicon accession | BN001307 |
Strand | + |
Start bp | 758636 |
End bp | 760749 |
Gene Length | 2114 bp |
Protein Length | 653 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | CCCH zinc finger protein (AFU_orthologue; AFUA_8G04360) |
Protein accession | CBF84877 |
Protein GI | 259486759 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.46432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GCAGAGCTTT GTCGCAACCT TTACGATGCT GTGAGGATGG AGTGCATGCT TTCTATCCCT GAAGATCGAC CGAGATCTCC CCGCCATGAA CCCTCAGGGA TTCTCCTTCC CTCCCCCTCC ACCTCCGCCT CCTACACAAC ATCCGCCGCA ACAACAATAC GCTCATAACA ATGCGTTCAC GCCGTATGGG CAGAATCACC ATGGTCAACG GGGTGGCCGC GGGGGTGGCC AATTCAGGGG CCGTGGGAGA GGCTACGGGA ATAGAGGTAG AGGAGGTCAT TTCATGAGCT CCGATGCCAA TCACTCTGGC GGCTACGCGG CAGCTCATGC TGGATATGCG CCCATGACAC ACTCAGGGTA CCCAGCTCAA CATATGCCAA ATCAACAAAC AGGCATTCCG ACGCCGCATT ATACGCAGTC GTCTTCGCAG GCTTTTTCGA ATGCCGTGAC TGGGAGTACA TTCGCCTCTA CGTCGCATTA TCCGCAACCT GCCGTTAATG GCACGGCTTA TCAGCATCAA TCAAGCTATG GTACTACATA TGCAACACCT ACACAACAAT CCCCTCCATA CACTCAAACA CATCCTGCTC ATCAAAATGC TACGCCATCG GTGCAGCCGA CAATGATGGG CCCTCCTATC CGCTGGGGTT TCGAGGGCAC AGGACATTCA GGCTCATTTC CAGGATTGCA GCGTCCCAGC CAACGGGGAC CGCGTCAGAA CAACACCTAT AATAATCAGA GCTCTCCCGG CAAACATGCG AACAAGCGCG ACCACACGTC AGCATTTGGC AAGCCTCAGT CGACAGCTCC ACGATTCCCG GCGCCACCTC CGGTCCCTAG TTTCGGTAAT CCTCTGCCTT TGAAACCGCC TACGCCGGTT GATTCGCAAC GGAAACCCAA GAAGAAGAAG CGGAAGCATA ACCAGCTAGG GTTAACCCCG AAGACTGAGG AGCACGAGTC CAGTGAGGAG GAAGATGACG CCGATGAGGA AACCAGGTTG GCATCCGGTG GCCCAGGCAC TGGGGTAGCA TTGCAAATCA CGTACAAAGG ACGAACATCA AATCTGCAGA CATCTGCAGA TATCGCAGCT TGGATCGCAG AGCGCAAGAA GCGTTTCCCT ACCCAAGCGA AAATTGAAGA GAAAAAGAAA GCTATGGAGG AAGCAAAGAA GGCGAAGAAA GCCAGAGAAG AAGCTCAACG GCAGCAGAGG GAAGCTCGCA AGTCAGCGGC TACCCGTGCA AAGGACCAAG AAAAGAAAGA GCAGACTCGA GTCGCCCTGG ATCCCGCCGA TGCAGCCGCG AAAGCCAAAA TGAAGGCCGA GAAGTTACGA CGGAAGCTAT TGAAGGAGGA GAAACGGATA GCGCAGGCAG AGGCTGATGC TGAGCGCGCT CGCAAAATGG ACGGGGTCCA AGAAGATTCA GTGCCGACTG AACGAGAAGC CGATCAACCT GAAAAGAAAG ATTCCGCAGC TAACGAACAA GCCGTTGGCG ATTTGGCGTC CGACGCGTCT GACGATAGCG ACTGGACTTC CTCAAGCGGG TCTGATCTGT CATCCTCTGA TTCTGATGAA AGTAGCGATG ACGATGACGA CGATTCTGCG CCGGAGCAAG CAACATCACG TCGGGAGGGA CCCGAACGGG TCGCGCCGCC GGCGCGCGAC GAGAAGAAGC GTATCTGTCG GCATTTTGCC CGCAACGGCC GTTGTCCTCG AGGCAAGACC TGCAAGTTTG CTCACGAGAA GCCTGACCGT GGGACCAAAG CACAACCAGT CGAGAACAAG GGACGAAAAG GACTCCTTGA AGCGGTAGGT GTCAACTCAT TATCGAGCTG TTTTGTTTTT ATTTGAGCCC AGCTAACAGG ACGTCTCCTA GCTCCTCGAC CGCCAGAAAG AAGACGAGAA CCGGAAACTG ATGGAGACGA TTATATGGCT AGGAGAGAAC GGGCTGCTCG ACGAACCGGC GGCTCAACAA GACGTTTTTT CAACTGATCC GACCCGTCAG ACTGATGAGT CCACGGGGCC GCTCGATGCG AGCGACATCC AGTTGGGCAA CGTCTCCACC TCTGGCTCTG TGGGCGAGCA ATGCCATCCT TCGGAAGGAA CGGCGCGTGT ATGA
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Protein sequence | MNPQGFSFPP PPPPPPTQHP PQQQYAHNNA FTPYGQNHHG QRGGRGGGQF RGRGRGYGNR GRGGHFMSSD ANHSGGYAAA HAGYAPMTHS GYPAQHMPNQ QTGIPTPHYT QSSSQAFSNA VTGSTFASTS HYPQPAVNGT AYQHQSSYGT TYATPTQQSP PYTQTHPAHQ NATPSVQPTM MGPPIRWGFE GTGHSGSFPG LQRPSQRGPR QNNTYNNQSS PGKHANKRDH TSAFGKPQST APRFPAPPPV PSFGNPLPLK PPTPVDSQRK PKKKKRKHNQ LGLTPKTEEH ESSEEEDDAD EETRLASGGP GTGVALQITY KGRTSNLQTS ADIAAWIAER KKRFPTQAKI EEKKKAMEEA KKAKKAREEA QRQQREARKS AATRAKDQEK KEQTRVALDP ADAAAKAKMK AEKLRRKLLK EEKRIAQAEA DAERARKMDG VQEDSVPTER EADQPEKKDS AANEQAVGDL ASDASDDSDW TSSSGSDLSS SDSDESSDDD DDDSAPEQAT SRREGPERVA PPARDEKKRI CRHFARNGRC PRGKTCKFAH EKPDRGTKAQ PVENKGRKGL LEALLDRQKE DENRKLMETI IWLGENGLLD EPAAQQDVFS TDPTRQTDES TGPLDASDIQ LGNVSTSGSV GEQCHPSEGT ARV
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