Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ANIA_09524 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Aspergillus nidulans FGSC A4 |
Kingdom | Eukaryota |
Replicon accession | BN001306 |
Strand | + |
Start bp | 1402264 |
End bp | 1403529 |
Gene Length | 1266 bp |
Protein Length | 402 aa |
Translation table | |
GC content | 59% |
IMG OID | |
Product | endo-1,4-beta-glucanase, putative (AFU_orthologue; AFUA_3G03870) |
Protein accession | CBF83171 |
Protein GI | 259485823 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000393841 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.409933 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCGCC TTGTCTCCTT TGCTTCTCTC CTGGCGGCTG TTAACGCCCA CGGCTACGTC CAGAATATCG TCGTCAATGG CGTCTACTAT TCTGGATGGG AAATCAATAC TTATCCGTAC ATGACCGATC CTCCAGTCGT TGCGGCGTGG CAGATTCCCA ACAGCAATGG TCCTGTTGAT GTGTCAAACG GCTACACTAC TGAGGATATC ATCTGTAACT TGAACGCCAC GAACGCGGCC GGATACGTCG AGGTTGCTGC TGGAGACAAG ATCAACCTGC AGTGGTCAGC CTGGCCCGAT ACTCATCACG GTAATTCCTG CCCAAGCCCG ATATTGGCGT ATGATATACT GATACCTCCG TCTAAAGGTC CTGTGATCTC CTACCTCGCC GATTGCGGCG ACGACTGCAC GACCGTCGAC AAGACAACGC TCGAGTTTTT CAAGATCGAC GCCGTCGGCC TCGTCGACGA CTCTACCGTC CCTGGTACCT GGGGTGACGA TGAGCTCATC GAGAACAACA ACTCCTGGAT GGTCGAGATC CCCACCTCCA TCGCGCCGGG TAACTACGTC CTGCGCCACG AGATCATCGC CCTTCACAGC GCCGGCACTG AGGGCGGCGC CCAGAACTAC CCACAATGCT TCAACCTGAA GGTTACAGGC TCTGGCACGG ATTCCCCGGC CGGCACGCTC GGTACAGAGC TCTACAACCT AGATGACCCC GGTATCCTGG TCAATATCTA CGCCAGCCTG TCGACTTATG TTATCCCCGG CCCGACGCTG TACAGCGGAG CTACGAGCAT TGCCCAGGCT ACCTCTGCCA TCACGGCTAC CGGCTCAGCG ACTTCTGGCG CTGGGGGTGC TGCTGCTACC GGTAGCAGTG CCGCTACGAC AACCGCTGCT GCTGCCTCTA CTACCGCCAC CCCGACGACA GCCGCTGCGC AGACAGCTAA GTCCGCCTCT GCGCCTTCGT CTGCGGCCAC TGGTTCTGTC CCTGCTGCCC CTACAACTGC AACTGTCAGC ACAACGACAT CCATTGCCAC CAGCGTCGGT ACCACCCTCA CCCGCACGAC CCTGGCCACC ACGACTACGG CCGCAGCCGC TGAGCCTTCT GCGTCGGCTC CTGCGCCCAG CGGCAACAGT GCTAGTGGTT CTAACCCCTT GTACGCTCAG TGCGGCGGCC TCAACTTCAA GGGAGCGTCT GGATGCGTCG CCGGTGCTAC CTGCAAGAAG ATGAACCCCT ACTACTCGCA GTGTGTCTCT GCGTAG
|
Protein sequence | MSRLVSFASL LAAVNAHGYV QNIVVNGVYY SGWEINTYPY MTDPPVVAAW QIPNSNGPVD VSNGYTTEDI ICNLNATNAA GYVEVAAGDK INLQWSAWPD THHGPVISYL ADCGDDCTTV DKTTLEFFKI DAVGLVDDST VPGTWGDDEL IENNNSWMVE IPTSIAPGNY VLRHEIIALH SAGTEGGAQN YPQCFNLKVT GSGTDSPAGT LGTELYNLDD PGILVNIYAS LSTYVIPGPT LYSGATSIAQ ATSAITATGS ATSGAGGAAA TGSSAATTTA AAASTTATPT TAAAQTAKSA SAPSSAATGS VPAAPTTATV STTTSIATSV GTTLTRTTLA TTTTAAAAEP SASAPAPSGN SASGSNPLYA QCGGLNFKGA SGCVAGATCK KMNPYYSQCV SA
|
| |