| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_02717 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001306 |
|---|
| Strand | + |
|---|
| Start bp | 2994104 |
|---|
| End bp | 2997994 |
|---|
| Gene Length | 3891 bp |
|---|
| Protein Length | 1203 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | RNA-directed RNA polymerase (Sad-1), putative (AFU_orthologue; AFUA_3G06790) |
|---|
| Protein accession | CBF84157 |
|---|
| Protein GI | 259486372 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.460708 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.0645954 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTCT TCGTACACAA TCTTCCCGGA AATTTTACCA AGGATTCGTT GAAACATCAG
CTTGAGCCGT TCATGCGGTC TCTGGCCATC ACTGACTACG ACTGCGAAAA ACCGAGGAAG
AAGCGTTTTG GCCATATCCT ATTCCTGAAT CAATCCGATG GCAAGAGATT TCTGGCTCAT
CATGGAGAAG AACGGCGAGC CGGGAGGCGG CGTCCCTTAT CCAAGCTGAA CTTACTCGGA
TCTCAGGTAC TCTGCAAACC GAGCCACCGC AAACCGGACG AATTCGACCT TCGAGCCCTG
GAAAACGAGG TGCAGGAGCG AACCAACCCT TCCCGCATAA TCGAAGAGGA AGGGGGCTCA
GTTTCGTTTA TATTGTCAAC GGCTAGCTGT GGGTACACTG TGTTTGTGGA CAATGAGTTC
TCCTACGTGC CAGAGGTGGA ACTCCAACAG TATGACTCTA TCATCTTCAG GAAGCGAAAT
ATTACTGTTC ACTTGGGTAA CACTCCTCGT ATCAAGATTC CCCTGAATAC AATCTATGAG
CTGGTCTGGT CCAAACACGG TTCGTTGCTG CTTACCTTGG TCACAGTCCC GTTATTTTTC
CAATGCGACG GCCATTCGCG TATTCGTCTC ACGTCGCCGG GTGGGCCTCA GGCCGCAGTT
GTCGGGCAAT GCCTTGTGTA CCAGTTTCAA GTCGTCTCAT CTTCATCGAA TTTAAGAGCA
CGAATGGGCA AGGTGGCAGA GTACGACTTG AGTGTTATAA ACTACGAGTT CAAAACAGTG
CATAATTTTG ACAGCTGGCA GTCGCAGCTC ACTTTGTTGA GAGACCGTTT GGGAGAGTAT
ACTAGGGCTG GGACGTTGCC TTTCGGAATC TTATTCCAAC TACAAGCACT GGTCTACAAC
GGGTACCTTC CTCCGAATAT CGTTCTACGT CTGACCAGAA AATTGGCGAG TATCACCAAA
ACAAGAAAGG TGCAAGGGAG GAGACCAATA TCGGTAAATT CTATGAAAAG ACTATTCAAC
TTGATTGACT GGCCATCCCC CTTTGGAGAC CCAGAAGAGT TCAGCATTAA AAGATTGCTA
GAGGTGATCA CGGGAAACGA CAAGGACCTC GGCGAAGGGG CTAGCGAAGC AGAGGCTCTC
TTTCAGCCCG CTCCGCACCT TGCACATATT CATCGAGTTG TTGTGACCCC TTCCCGCATA
ACCTTGCATG GCCCAGAGAC GGAGCCTCTG AATCGAATCC TTCGACGCTT TCCGAACCAT
CACGAGTACT TTATCCGCGT GCAGTTCTGC GATGAGAACG GGGAGGATAT CTACTTCAAT
CCTCGAATTA ACAACAGTTT AATCTTTGCG AGGTTTAAGA ACGTGTTCGC AAATGGCTTT
CAGATTGCTG GCCGCACTTA CACTTTCCTG GGGTTCTCTC ATTCATCGCT GAGGTCTCGC
TCAGCCTGGG TAAGCTACCT ATCTCGTCTC TCCCTATACC GGCTCCGCTA TTCCTCGACG
TCGTTGAAGA ATCTGTAACT GACCCGCTAG TTCTCTGCGC CTTTCATCGA CGACGACGGG
AGCCTCCAGA GTTATTTCAC AATTATTAAG GCCATTGGAA GGTTCTCGGA GATAACTTCC
CCTGCTCGTT GCGCAGCCAG AATTGGACAG GCCTTCTCGG AAACCCCATT TGCCGTGAAT
CTGAAGGAAA ACGGGATCCG TGTATTGCGA ATACCAGACG TACAAGTCGG TGGACGGGTC
TTCAGCGACG GTGTTGGGAC AATCTCTGCA AAAGCCGTTG ATATAATCCA CGGCGTCTTG
CCGCCCCGAA ACGGAGCGCC AACATGTTTT CAGATTCGTC TAGGGGGTGC AAAGGGCATG
CTATCCTTAG ACCCGCGTCT TCGAGGCTCC AAGATCTGTA TTAGGCCTTC CATGACCAAG
TTCCAGACAG ACGACCAGGT AAACGTGGAA ATTTGTGGCT CAGGATCAAA ACCTATCCCT
CTGTTCTTGA ATAGACAAGT GATCAAGATC CTGGAGGATA TGGGCGTTGA TAGAGAGTGG
TTTATGACGC TACAGGAGCT GCGCATAGAA CAGCTGCGAA AGGCCACTGC AACCACCAAG
AACACAGCAA CCTTTGTTAA AGGCCAGAGT GTCGCCGACT GCGTCAAGCT ATATCGATTA
TTTCTGTTGT TTCATAACCT AAAGCTGGAC TACAAGAAAA TCCCTTTTCT CCGAGCGGTC
GTTGAAGCCA TGGTCCTTCG GGAACTCCGC CTTCTGAAAC ATAAAGCACG AATCCCAGTG
CACAAGGGTA TTACGCTGTA TGGTGTCATG GATGAGACTG GATTCCTAAA CGAAAACGAG
GTCTTTGTGA CCTATCAAGC CATGGACAGG CTTGCAGCTC CTCCCCAAAA CTGCCGTCTG
CTTGTCACCC GGTCTCCGGC TTTACACAAC GGGGATATCC AATACCCCTA CAATGTCGTT
CCGCCTAAGG GTCACCCACT TCAGCAACAG CGGAATTGTA TCGTCTTCAG CCAAAAAGGT
ACTCGAGATC TTCCCAGTCA GCTCAGCGGG GGAGATCTGG ATGGGGACTT GTACAACATC
ATTTGGGACC CAGCAGCCGC TCCGAAACGC GTCTTTACCC CGGCCAACTA CCCCCGTAAC
CCGCCTCTGG ATATCAAGCG TGTGGTAGAG AGAGAGGACA TGGCCAACTT CTTTGTCGAG
TTTATGCAAT CCGATAGACT TGGTGTTATT GCGACCAAAC ACATGATCTT AGCCGACCAG
ATGGAACTCG GTACTTCACA CTCCGACTGT AAGAAGCTTG CGCAGCTGCA CTCTACAGCA
GTAGACTTCT CAAAGACTGG AATTCCTGTC AGGCTTAAGG AAATGCCGTT CGTTAATCGT
AGTAGACCAG ACTTGTAAGC CCCCGGGTTC CTACATAAGC ACAGAATCCC CAGCTAATAC
CTACAAGCCT CGCCCCGGGA CCCCTAGCCA AGATCCACGA CAGGCAGAAC ATTCAACTTG
AGGCCCGCTA CGTTCACCCC TATCCAGATG ACGATATTGA CTTCAGCCCG GTGCACAAGT
ACTATCGATC TGAGAAGATA CTGGGCAAGC TCTATCGCGC CATCAATGAG CATGAGATCT
GGACGAAGGA TATTCACACG ACAGTCAATT CTAATCCGAC CGCCGTGTGG AAGAGGATAA
TAGACTCATT GACCGGGCGG TGCATCGCCC TCGGAGCACC CGTAAACTGG AAAGCGCACG
TCGAAACAGC TCGTCAACTT CGTTCACTGT ACTACATCCT CCCAACGTAA AATACTGACT
ACTAATACTG GAACTAGGTA CGAAGATTCA ATGTCCAATG CGATGGCTAA CTTCTCCAAA
CACCCCATCT ACCCCTTAAC TGAGCTCGAA GTCTTCATCG GCCAGGTTCT CAATAACAGT
GGCGCCCAAA CCAACCGACA GCGCGAACGG TCTATCAAAC TCAATGATGA ATTCGAGAGA
ATAGCTTCCT TCATATTATC GCAAATGCGC CCTTCAGGCC TCATAACAGG TTACGTAAGT
GAATACGATT CATTGCAGCG TTGTCTAGCT TGCTTCCATG TTGCTGGTGA GACGGAAAAA
GGTCTCGGTC ATCGACGGCA GGGATGGGAT CGGCTCGAAA GTTTCCAGGT TGTTTCGGCC
TGTGCGCTGT TAATGGAAGT AGAGGAATTG GAGAAGAGCA GACGGCTTTA CGGTGAAAAT
AGGCGCCCAC TTCTGGACGC GTTCACATCC TCCAGGAAAG AGAAAAACGA TTACGAGCCA
AAAGGCCTTG ATCGGGCCAC GCAAAAAACT ACTTTTGAAT ACGGTGAAAG GTGGACTGCG
GCTGATGTTG AGGCCATGTT GCGTCAGCTT GAACTCAACA CTATCGTTTG A
|
|---|
| Protein sequence | MEVFVHNLPG NFTKDSLKHQ LEPFMRSLAI TDYDCEKPRK KRFGHILFLN QSDGKRFLAH
HGEERRAGRR RPLSKLNLLG SQVLCKPSHR KPDEFDLRAL ENEVQERTNP SRIIEEEGGS
VSFILSTASC GYTVFVDNEF SYVPEVELQQ YDSIIFRKRN ITVHLGNTPR IKIPLNTIYE
LVWSKHGSLL LTLVTVPLFF QCDGHSRIRL TSPGGPQAAV VGQCLVYQFQ VVSSSSNLRA
RMGKVAEYDL SVINYEFKTV HNFDSWQSQL TLLRDRLGEY TRAGTLPFGI LFQLQALVYN
GYLPPNIVLR LTRKLASITK TRKVQGRRPI SVNSMKRLFN LIDWPSPFGD PEEFSIKRLL
EVITGNDKDL GEGASEAEAL FQPAPHLAHI HRVVVTPSRI TLHGPETEPL NRILRRFPNH
HEYFIRVQFC DENGEDIYFN PRINNSLIFA RFKNVFANGF QIAGRTYTFL GFSHSSLRSR
SAWFSAPFID DDGSLQSYFT IIKAIGRFSE ITSPARCAAR IGQAFSETPF AVNLKENGIR
VLRIPDVQVG GRVFSDGVGT ISAKAVDIIH GVLPPRNGAP TCFQIRLGGA KGMLSLDPRL
RGSKICIRPS MTKFQTDDQV NVEICGSGSK PIPLFLNRQV IKILEDMGVD REWFMTLQEL
RIEQLRKATA TTKNTATFVK GQSVADCVKL YRLFLLFHNL KLDYKKIPFL RAVVEAMVLR
ELRLLKHKAR IPVHKGITLY GVMDETGFLN ENEVFVTYQA MDRLAAPPQN CRLLVTRSPA
LHNGDIQYPY NVVPPKGHPL QQQRNCIVFS QKGTRDLPSQ LSGGDLDGDL YNIIWDPAAA
PKRVFTPANY PRNPPLDIKR VVEREDMANF FVEFMQSDRL GVIATKHMIL ADQMELGTSH
SDCKKLAQLH STAVDFSKTG IPVRLKEMPF VNRSRPDFLA PGPLAKIHDR QNIQLEARYV
HPYPDDDIDF SPVHKYYRSE KILGKLYRAI NEHEIWTKDI HTTVNSNPTA VWKRIIDSLT
GRCIALGAPV NWKAHVETAR QLRSLYYILP TYEDSMSNAM ANFSKHPIYP LTELEVFIGQ
VLNNSGAQTN RQRERSIKLN DEFERIASFI LSQMRPSGLI TGYVVSACAL LMEVEELEKS
RRLYGENRRP LLDAFTSSRK EKNDYEPKGL DRATQKTTFE YGERWTAADV EAMLRQLELN
TIV
|
|---|
| |