| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_05710 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001305 |
|---|
| Strand | + |
|---|
| Start bp | 1661578 |
|---|
| End bp | 1663928 |
|---|
| Gene Length | 2351 bp |
|---|
| Protein Length | 626 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | VHS domain protein (AFU_orthologue; AFUA_1G06680) |
|---|
| Protein accession | CBF81356 |
|---|
| Protein GI | 259484813 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0235702 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCTA GGGACCGCTT TGGTGGTGCC TATGCTGACC TGGGCTTCAC CCCTCTTCAG
AGAGCGATTC GTACGTTACA ATGCCATGGC AAGCATTTGT ACTCTTCAAC TAACTCGCTT
CCTCATTTGC AGGAAATGCC TGCGACTTAT CACACTACGA ACCCAACCTG GCCCTAAACC
TGGAAGTTGC AGACCTGGTC AATTCCAAGA AAGGCAATGC GTGAGTACTC CCGACTCGAG
AGCCAAGTCG CAGCGCCCAG CCGAAACCCC AATTCGACCT TCTTTCTGAC TGCTTGGATG
AAATAGTCCT CGAGAAGCAG CATTCGAAAT TGTCCGCCTG ATCAATTCCC GGAACCAGAA
TGTCTCGTTA CTAGCATTGG CGGTAAGACA GAGCTCCGTG ACTATCGCAG AATGGCGCAT
TGCTGACGAG ATCGATTCCG GTAGCTTCTG GACATCTGTG TCAAAAACTG CGGATACCCG
TTCCATCTTC AGATCAGCAC GAAGGAATTT CTAAATGAGT TGGTCCGTCG CTTCCCCGAG
CGGCCGCCTC TGCGGCCCAC GAGGGTCCAG CATCGCATTC TCGAGTCAAT TGAAGAGTGG
AGGCAGACAA TCTGTCAGAC ATCGCGGTAT AAAGATGATC TGGGGCATAT CCGTGATATG
CACCGGTTAC TACTGTACAA AGGCTATGTA TTTCCGGAAA TTCGGCGCGA GGATGCGGCT
GTTTTGAACC CTAGCGATGT ATGTTGGCCT ACGGATGCAT GTCAGAACTG TGTTGACCTG
GGTTGCAGAA TCTGCGTTCG GCTGAGGAGA TGGAGGAGGA GGAGCGAGAA GCGCAGTCGG
CGAAGCTGCA GGAGCTGATT CGGAGAGGAA CGCCGGCAGA TCTACAGGAA GCAAACCGGT
TGATGAAGGT TATGGCGGGA TACGACACCC GGCATAAGAC CGACTACCGG GCTAAGGCGG
CAGAGGAGGT GGCCAAAGTT CAGGAGAAAG CCAAGATTTT GGAAGAAATG CTGCAGAGCC
AGGCGCCGGG TGATCGGATC GCGGAGGGCG ATGTGTTTGA GGTAGGATGA AGAATCCACC
GTAATGAAGA AGTCTTCTAA CAAAGCCGCA GGAACTTGCG AATGCCCTTC AGAGTGCGCA
TCCCAAGATC CAGAAGATGT GTGAAGAGGA GTCGGATGAC CCAGAAGCTG TGCGCAAACT
GTTGGAGATC AATGACAGCA TACACCGCAC AATCCAGCGG TATAAGCTCG TGAAGAGTGG
TGATTTCGAC GCTGCGACGA GGATTCCCAA GGGCACGTTG GGCACTACTA CAGGGGTTTC
TAAGAATGCC AACAACGAGC TGTCTCTGAT CGATTTCGAC CCAGAGCCTA GTTCCAACGG
CGCAGGACAG CCGGCACAGG GGTCTAGCTC TATCGAGAAT GACTTGCTTG GACTATCAAT
CGACGAGCCT GTTCCGTCCG GTGGAATCTC GTTAGGCCAG AGTATGTTTT TCTGTCCTTT
GCACAAGTTG TTTACTAACA TTCGTGAAGC GAGCTCTCCG GCGCCCCAAA TACCCCAGAA
TCCTAGCGCA TTCCAAGCAA ATTATGATAT CCTCGGTTCG TTAAATTCTA GCCAACCTGC
GTCGTTCTCG TCGACACCCG CTCCTGCATT TCATCAACCT CCAGTTACTG CAACCCCACC
CCCTGCAGTG GACCCATTTG CGTCTTTAGT ATCCGCTAGC CCTCGAAACA ACAGCCCGCT
CCCTTCCAGC TCTGCAAGCC CTCGACCGCC CGCATCGTCT TCCCTCCTTG ATCTCGCTGG
AGCTGCCGAG CAGAAGCCTA AGACAACGGA CGATGACGAG TGGAACTTTA CTTCCTCTTT
ACCAGAGAAT TCACTGCCGA GCACCCAGCG TGTGCAGGTC CTGAACTCGT CATTGAAGAT
CGATTTCGTC GCTCGTCGAC ATCCCCAGCA ACAACGCCAA ATTCATATCG TCGCGTATTT
TTCTAACGCG ACAAGTCTAC CCTTGAGTGA CCTCCACTTC CAGGTCGCTG TTGAAAAGGT
ACCTGCCCTC TATGCCTCAC CTTACCATTC GCTAACTAAC CGAAACAGGC ATACACATTA
CACCTCCGCC CCCAATCCGG CCGCGACATT GCGCCGCTCC AGCAAAACGG CGTGCAGCAG
GAAATGCTCC TTGACGGCAT CGATATGGGC AAAGGCAATA CGGTCAAGAT TCGCTTCCGA
GTCTCGTACC GGCTGGGCAG CGATTCGAAA GAGGAGCAGG GAATGGTACC ACCGCTGGGC
ATTGCATAGC GCCACTCACT CGGCCACGAT TAGTCTTACA TTCAGTCCTA TTTAGCTAGC
TTATTTTACC C
|
|---|
| Protein sequence | MAARDRFGGA YADLGFTPLQ RAIRNACDLS HYEPNLALNL EVADLVNSKK GNAPREAAFE
IVRLINSRNQ NVSLLALALL DICVKNCGYP FHLQISTKEF LNELVRRFPE RPPLRPTRVQ
HRILESIEEW RQTICQTSRY KDDLGHIRDM HRLLLYKGYV FPEIRREDAA VLNPSDNLRS
AEEMEEEERE AQSAKLQELI RRGTPADLQE ANRLMKVMAG YDTRHKTDYR AKAAEEVAKV
QEKAKILEEM LQSQAPGDRI AEGDVFEELA NALQSAHPKI QKMCEEESDD PEAVRKLLEI
NDSIHRTIQR YKLVKSGDFD AATRIPKGTL GTTTGVSKNA NNELSLIDFD PEPSSNGAGQ
PAQGSSSIEN DLLGLSIDEP VPSGGISLGQ TSSPAPQIPQ NPSAFQANYD ILGSLNSSQP
ASFSSTPAPA FHQPPVTATP PPAVDPFASL VSASPRNNSP LPSSSASPRP PASSSLLDLA
GAAEQKPKTT DDDEWNFTSS LPENSLPSTQ RVQVLNSSLK IDFVARRHPQ QQRQIHIVAY
FSNATSLPLS DLHFQVAVEK AYTLHLRPQS GRDIAPLQQN GVQQEMLLDG IDMGKGNTVK
IRFRVSYRLG SDSKEEQGMV PPLGIA
|
|---|
| |