Gene ANIA_05340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagANIA_05340 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAspergillus nidulans FGSC A4 
KingdomEukaryota 
Replicon accessionBN001305 
Strand
Start bp2842400 
End bp2843737 
Gene Length1338 bp 
Protein Length390 aa 
Translation table 
GC content52% 
IMG OID 
ProductU3 small nucleolar ribonucleoprotein protein Lcp5, putative (AFU_orthologue; AFUA_6G14260) 
Protein accessionCBF82072 
Protein GI259485218 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AAAGTGAGGA AACCTCCAGA CGAAATGACA AACTCAGCAA TGGCGTCGGC AGTGGCGCAA 
CAGCAACAGC CTGAGTTGCA AAACATATCG GATCTACTTG AGACTCTCAC CACGTCCCTT
TCCACCACTG GAACGTCCCT TCCCAGCACT AAGCGCGAAT CCCCTACGGA AGTCTCTATT
TTACCGCCGC AGGATGGCAT TTCGTTGCTC GACACCAAAT GCGAACTGCT TCTTTCGTAT
CTTCAAAATC TCGTTTTTTT GATGATCCTT CAACTGAGGG AGCTGCCTTC AAATGATGCC
GCAGATGAGA AAGGCGACGA TTCCCAGTCG ATCCGAGCGC AAGTGACGAG TAAATTAGTC
GAACTTCGCA CATACCTGGA CCGTGGAGTC CGGCCTTTGG AAGGCAGACT GAAGTATCAA
GTGGACAAAG TTGTCAAGGC AGCAGAAGAA GCGGAAAGGG CTGAAAAGAG TTCTCAGGCC
ACCAAGCCAA GCAAGTCTGA AGGCGACGAT GAGAGCGATA ATGAGGGATC AGCATCGGAC
AATTCCAGCA GCGAAGAAGG TAGCGACAGC GAGGAGGACG AAGACATTGA CGAAATGGCT
TATCGGCCTA ACGTGTCCGC ATTCTCTAAG AAGATGGTGC CAGAGGCAAA GGCGGATAAG
ACTGCGCGAA AAACTTCGAG CGACGGCATC TACCGACCAC CGAAGATCAT GCCAACAGCC
ATGCCTACTA CTGAGCGTAA GGAGCGCAAG GAACGACCTA TCCGCAGATC CAATGTTATC
GATGAGTTTG TGAGCGCTGA AATGTCGTCC GCGCCGATGG CTGAGCCTAG CATCGGTAGC
ACAATCGTCT CGGGAGGCCG ACACACAAAG AGCAGGAAAG AAAGAGAGCA CGAAGCAGAG
CGGACTCGCT ACGAAGAAAC CAACTTCGTC CGTTTGGCAG GTGAAAGCAA GAAGGAACGT
GCGAAGAAGG CGGCGGCTCG TCGTGCTGAA GGGACATTCG GAGGCGAGGA ATGGAAAGGC
CTCACTGAGG GCGCAGATCG CATCACACGA CTCACAAAAC GGGCCAAAGG AAGCAGTAGT
GCGCTGGAGA GGAGTCGGAA GCGCAAACTC ACCGAAGACG GGCAGCGCGG GGATGGTGCT
GGAGTTGGTC AAATCTTTGA GAAGCGCCGG AAGAAGATTG AATCCTGGAA GCGATAGTGC
CTTGCTGTCT CAAAAGTCAA TTGTCTTGAA TCGATTTGGA GTACGTCTGC TCTATGTGTT
ATCCATAGAT TACCCTTTTG CATCAGCGCT GTGATTCTGA CGCCAGCCAA ATGGTGTTAG
ACAACCAATT CCATAACT
 
Protein sequence
MTNSAMASAV AQQQQPELQN ISDLLETLTT SLSTTGTSLP STKRESPTEV SILPPQDGIS 
LLDTKCELLL SYLQNLVFLM ILQLRELPSN DAADEKGDDS QSIRAQVTSK LVELRTYLDR
GVRPLEGRLK YQVDKVVKAA EEAERAEKSS QATKPSKSEG DDESDNEGSA SDNSSSEEGS
DSEEDEDIDE MAYRPNVSAF SKKMVPEAKA DKTARKTSSD GIYRPPKIMP TAMPTTERKE
RKERPIRRSN VIDEFVSAEM SSAPMAEPSI GSTIVSGGRH TKSRKEREHE AERTRYEETN
FVRLAGESKK ERAKKAAARR AEGTFGGEEW KGLTEGADRI TRLTKRAKGS SSALERSRKR
KLTEDGQRGD GAGVGQIFEK RRKKIESWKR