| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_05162 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001305 |
|---|
| Strand | + |
|---|
| Start bp | 1139256 |
|---|
| End bp | 1140868 |
|---|
| Gene Length | 1613 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | pyruvate dehydrogenase E1 component, alpha subunit (Eurofung) |
|---|
| Protein accession | CBF80992 |
|---|
| Protein GI | 259484616 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0857109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CCTCCTTCTC CCTCCTCCGT CCATTGCTTG ATTACCGTCC ATCATGTTGT TCCGAACTGC
GTGGGCCCGT CAGGCTGCGC CTCTGAGGCG TCAGGCTTTT GCTCCCCTTG CTCGCCGCTC
CGTCACCACC GACGCCGCTT CGTCGCATGC TGAAAATATC CCAGAGGTCG GTATCAGCTA
TCCCGAGCTG AAAATCTTGC GCAACGGGAT CGAATTTGAT ACTGATGCGC GTTCGATAGG
ATGAGAACAA GCCTTTCACT GTCCGTCTCT CTGATGAGAG CTTCGAGACT TACGAGATCG
ACCCTCCGCC TTACACCCTG GAGGTGACCA AGAAGGAGCT CAAGCAGATG TACTACGACA
TGGTCGCTAT GCGGTATGAA CTATTTACCC TTCCTTGGAT CGCGAAACTT TCCGAATTTA
TACTGACCCT TGGTTTAGAC GCATGGAGAT GGCCGCCGAC CGTCTGTACA AGGAGAAGAA
GATCAGAGGT TTCTGCCACT TGTCAACCGG TCAAGAAGCC GTCGCTGTCG GTATCGAACA
CGCCCTCACC CGCGAGGACA AGATCATCAC TGCTTACCGA TGCCACGGTT ACGCGATGAT
GCGCGGTGGT ACTATCCGCT CGATTATTGG AGAGTTGCTC GGTCGTCGCG AGGGTATTGC
TTACGGCAAG GGTGGTTCTA TGCACATGTT CGCCCCCAAC TTCTATGGCG GTAACGGTAT
TGTCGGTGCC CAGGTTCCTG TTGGTGCCGG TCTTGCCTTT GCTCAGCAGT ACAACGAGGA
GAAGTCCACC AGTGTGGTTC TGTACGGTGA TGGTGCTTCC AACCAGGGTC AGGTCTTTGA
GGCTTTCAAC ATGGCCAAGC TCTGGAACCT TCCCGTTCTT TTCGGTTGCG AGAGTAAGTT
TCGCATGGCA TATTCATTTT AATTTCCACT GGCTAATGAT CGCAGACAAC AAGTACGGTA
TGGGTACCTC CGCCGCTCGT TCCTCTGCCT TGACCGACTA CTACAAGCGT GGTCAGTACA
TCCCTGGTAT CAAGGTTAAC GGTATGGATG TTCTCGCCAC CAAGGCTGCC GTCAAGTACG
GTAAGGACTA TGCCATCTCT GGCAACGGTC CTCTGGTCTA CGAGTACGTC ACCTACCGCT
ACGGTGGTCA CTCCATGTCC GACCCCGGTA CCACCTACCG TAGCCGTGAG GAGATCCAGC
GCATGCGCAG CACCCAGGAT CCTATCCAGG GTCTCAAGCA GAAGATCCTT GACTGGGGCG
TCATGAGCGA GGAGGACCTT AAGGGTCTCG ACAAGAGCGC CCGTGCTCAC GTCGACGAGG
AGGTTGCCAT TGCCGAGAAG ATGCCTCTGC CCGAGAACAA CTCTCGCATC CTGTTCGAAG
ACATCTACGT CCGCGGCAGC GAGCCTCGAT GGATGAGGGG TCGCACTGTT GACGAGACTT
TCTACTACTA GTTCTTTGCA TAGAGTGCTT GTTTCATTAT CTTCTCTCTA CGCTTGCGGA
GGAGGGAAGC GAGTATAAGA GCGGTACACT TGTCCACATG ATGTTTACTT TGTAATTTAG
CCGGATTTTG TTTGCATTGG CCATATAGCA AATAAAGACT ATTGGTAGGC CAT
|
|---|
| Protein sequence | MLFRTAWARQ AAPLRRQAFA PLARRSVTTD AASSHAENIP EDENKPFTVR LSDESFETYE
IDPPPYTLEV TKKELKQMYY DMVAMRRMEM AADRLYKEKK IRGFCHLSTG QEAVAVGIEH
ALTREDKIIT AYRCHGYAMM RGGTIRSIIG ELLGRREGIA YGKGGSMHMF APNFYGGNGI
VGAQVPVGAG LAFAQQYNEE KSTSVVLYGD GASNQGQVFE AFNMAKLWNL PVLFGCENNK
YGMGTSAARS SALTDYYKRG QYIPGIKVNG MDVLATKAAV KYGKDYAISG NGPLVYEYVT
YRYGGHSMSD PGTTYRSREE IQRMRSTQDP IQGLKQKILD WGVMSEEDLK GLDKSARAHV
DEEVAIAEKM PLPENNSRIL FEDIYVRGSE PRWMRGRTVD ETFYY
|
|---|
| |