| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_11008 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001304 |
|---|
| Strand | - |
|---|
| Start bp | 2535332 |
|---|
| End bp | 2536840 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | Squalene epoxidase [Source:UniProtKB/TrEMBL;Acc:Q27PP1] |
|---|
| Protein accession | CBF80034 |
|---|
| Protein GI | 259484101 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.606924 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCA CCCGTGCCAA CGGCCACGCC AACGGCCAAG CCTCGAAACC TTCAGACGCC
GCAGAGCTCC GCAGACGACT TCACCATGAA GCCGACGTTG TAATAGTGGG TGCAGGAGTG
CTGGGGTGCG CGCTGGCGGT GGCATTGGGG CGCCAGGGGC GTAGCGTCCT CCTCCTGGAA
CAGTCGCTCA AGGAGCCAGA CCGCATTGTT GGTGAACTCC TGCAGCCTGG AGGGGTCTCT
GCCCTCGAGC AGCTAGGATT GCGAGACTGC TTAGAGGATA TTGATGCCAT ACCCACAAAT
GGTTACTATG TCACCTACCT GGGCAAGCCC GTCAAAATCC CATACCCCAG CCAAAGTCCC
GGGGCGCCGC CACCGGAGGG CCGCTCGTTC CACCATGGCC GGTTCGTGAT GAAGCTGCGC
GAAGCTGCAG GGGCTTGTCC CAATGTCACT ATCGTTGAGA CAAAGGTTAC GGACCTGATC
ACCAGTTCCC ATTCCAAGCA GGTTCTTGGT GTGGAATGCG TGACCAAGGA GTCCAAGGAC
TGCTATTTCG GTCAGATCAC CGTCGTCGCG GACGGGTACG CCTCTAAGTT TCGAAAACAA
TACCACCCTT ATACCCCGAA GGTTCGATCG AAGTTCTGGG GGCTTGAGCT CATTGATGCG
GAACTGCCGC AGCCACACTA CGGCCATGTC CTCCTAGAGC CTGAGCGCCC GCCCATTCTC
ATCTACCAGA TCGGAACTCA CGAAACGCGA ATCCTCTGCG ATATCCCCGA AAATCTGCCC
TCGGCGTCCG TCAAGAACGG AGGCGTAAAA GGTCATCTCC GCAACGTCGT GCTCCCGTCC
CTGCCCAAAT GCGTGCAGCC CTCCTTTGCT GCGGCGTTAG ATAAAGGTCA GCTGCGGTCA
ATGCCGAACT CCTTCCTGCC GAGCGCGCCG AACAAGACAC CGGGGTTAAT AGTGCTGGGT
GATGCGCTAA ACATGCGGCA TCCATTAACT GGCGGAGGCA TGACTGTCGC TTTGAATGAC
GTCGTCATTC TCCGCGACTT GCTCAGCCCG GAGAAGGTGC CCAGACTAAG CGACACCAGA
CTCGTCCTCA AAAAGCTGTC CACCTTCCAC TGGAGACGAA AGATGGGGGC GTCTGTCATC
AACATCCTAG CTCAGGCGCT GTACTCTCTC TTCGCTGCAG ATGGTAAGCC GCTTCCCTCC
TAATCCATTC ACTATCGAAC CAAATACTAA CCTCTCGCAG ACGATAACCT CAAAGCCCTC
CAACGCGGCT GCTTCCAGTA TTTCTCCATG GGGATGTACG AAACCCCCGT CAGCCTCCTC
GGCGGCATGC TCAAGAAACC AGAAGTCCTC TTTGCGCACT TCTTCACTGT TGCGTTCCTC
TCACTGTGGA TGATCATCCG CGACTCCCCC CTGTACAAAC TCCCGCTCGC ATTGATCCGG
TGCGCGCTTG TCTTTTGGAC GGCGTGTGTT GTCATCTTTC CTTATATGTT AATTGAAGCC
TTTTGTTAG
|
|---|
| Protein sequence | MATTRANGHA NGQASKPSDA AELRRRLHHE ADVVIVGAGV LGCALAVALG RQGRSVLLLE
QSLKEPDRIV GELLQPGGVS ALEQLGLRDC LEDIDAIPTN GYYVTYLGKP VKIPYPSQSP
GAPPPEGRSF HHGRFVMKLR EAAGACPNVT IVETKVTDLI TSSHSKQVLG VECVTKESKD
CYFGQITVVA DGYASKFRKQ YHPYTPKVRS KFWGLELIDA ELPQPHYGHV LLEPERPPIL
IYQIGTHETR ILCDIPENLP SASVKNGGVK GHLRNVVLPS LPKCVQPSFA AALDKGQLRS
MPNSFLPSAP NKTPGLIVLG DALNMRHPLT GGGMTVALND VVILRDLLSP EKVPRLSDTR
LVLKKLSTFH WRRKMGASVI NILAQALYSL FAADDDNLKA LQRGCFQYFS MGMYETPVSL
LGGMLKKPEV LFAHFFTVAF LSLWMIIRDS PLYKLPLALI RCALVFWTAC VVIFPYMLIE
AFC
|
|---|
| |