| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_07847 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001304 |
|---|
| Strand | - |
|---|
| Start bp | 2812709 |
|---|
| End bp | 2815381 |
|---|
| Gene Length | 2673 bp |
|---|
| Protein Length | 646 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | LysM domain protein, putative (AFU_orthologue; AFUA_5G03980) |
|---|
| Protein accession | CBF80232 |
|---|
| Protein GI | 259484209 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.352183 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTTG TCCACCTGCT TGCCGCTGGG CTCATCCCTG CGCTTGTGTC GGCCCTGCTC
CGTCGTGACG TTGACTGCCT CTTTGCTACA ACCCCTGCTA ACGGTGCTAC ATGCCAGAGC
TTTGCAAGCA ATTGGGGGCT GTCCGTAAGC GAGTTCCAGG AACTGAACCC TGGCACCACC
TGCCCTGATA TAGACACAAG CAAGGCATAC TGCGTCGTCG GCACTGTCAC TGCAGATGCC
CCAGGCACCA CGCTTACTAC AACGACATCC ACCTCAACAA CTACCACTCC TACGAATACG
ACAACCACTA CCCAGCCTCC GACCGCGGCC AATCCGACTG TGCCTACCCC AACCATGCCT
GGTATTGTAG ACAACTGCGA CAGCTTCTAT AAGGTCTCAT CGGGCGACCA GTGCGACAAT
ATCTCTCAGA GGCATAGCAT CACCACGGCT CAGCTCCGGA GCTGGAATAG CGAGATCAAC
ACCGGTATGT CCACTTCATA CTTCCCTTCA TCTCTTCTAG TCAATCATAG TCATACAATA
ACTCTAACAC CTTATGTACT AAAAAGACTG TACAAACCTC TGGCTTGACT ACTACATCTG
TATCCATGTT CCCGGCGCAA CCACCACTTC TTTAACAACA ACAACAACAA CAAATGCAAT
TGTGACTGGT CCTACACCCC AACAAACTGG TATCATCTCG AATTGCAACA AATACCATCT
GGTTGAGTCA GGCGACGGTT GCGCCTCCAT CGCCAGCGCC TACGGCATCT CACTATCTAA
CTTCTACAGC TGGAACCCTG CTGTTGGGTC ATCCTGTGGA GCGCTGTGGC TAGGATACTA
TGTCTGCGTT GGGACTTCAT GTAAGTGAAT TCCTGCCTGA GATTCACCAT TTATTAAAAC
CTTTCCCCTA TCAGCCTCCC AACCAACCCC AACAAGTACA ACAAGCCAAA CAACCACCGC
CACCGCCACA ACAGCACCGG GCCCCTCCCC CACGCAGTCC GGTCTAATAA AAACCTGCAC
AAGCTACTAT AAGGCACAAG TAGGGGACAC GTGCCAAGCG ATAGTGCAAG AAAAGTACCC
CTATGTGAAT TCCCTGACCC TTTTTGTGCG CTGGAACCCG GCCGTCGGGT CTAGCTGCTC
GAACCTGCTG GCTGGGTACT ACTACTGTGT CGCGACAGAA CTCCACCAGC CCATGCCAGG
GATTGTGAGT AACTGCAAAA GGTATTATCA GGTGAAGGCA GGAGATGACT GCTGGTCAAT
TCAGCAGCGG TATGGGATCA CGGCAGCGCA GTTTAATCTC TGGAATCCAA TGGTGGGGAG
TTCTTGCGGA AGTTTGTGGC AGGGGTATTT TGTTTGTGTT GCTATTTAGA ATGGCAGGTT
GGAATTAGAG AGGTTAGACC TCGACACAAC CCGCGGAATA TGGGTGAAGG ACCTGTAATT
TTTGTTTAGA TACGGAAATG TGCCTGTTCT GCAGGAACCA ATCAGTAATG GCAGCCAGCC
CGGTGGGCCG ACCCGGCCGA CGCAAGTCTG AAATCGTGGC CGAGGTCATG ATTTCGCGAA
AATGGCCATC GATTGTTCCC AGGACACCCT CTTTTGTTGA ACACTTTCGA CCATTTGTCC
ATCTTTCAAG CCTCACTTTC CAGAGGCCGG TTTGGCTGCT CCTATCTATA AATAGAAGCT
ATTTTTCTCC CCTTCCACAA TGCTCATTGC CCAGTCTCTC CTTGTCCCGC CTTTTCCGAC
CGAACAGCAT CACTTTGTTA ACCAGACTTA GCAACTGTTT ATTGCAGCCT CCTGTTGATT
CCTTGTTTGT CTATCTCAGT CTTTTTGCGG CTGGTCCGCT GAAATGCGAT CTGTTTGTCT
CTGCCTTCCT GTAAGTGCAG CCATCGTCTG GCTTTCAACT ACTCATCTCT GTCGTCGTAG
ATTCATCCGA CAGAGGTGCT TGATTTGGAT GAGGATGATT GCTCTGATGT CTGTAAATTG
CTCTTAAGTG TTATTGAAGT GGATACTCAC GCTAGTCAGT TGGTCAACCA GTTTGGTGGG
AGGCTGATTC GATTAATATC GCTCTATGTT GAACAGAGTT CGAGTGTGTT GGAAGGAGCG
AAAAAAGGGG GCCATATTCG ATGGCACATT TTAGCAGAAG ATCAGACGCA GTTATCGTCG
AATTATCGCG ACGGATGTCT GAAGACATAT TCCATCAAGT TCTGGCTAGA TGTGAGTCTG
TTATTCCTCG GGCTTGTCCA ACCACTCACA GGCTGCAGGA ATCAGTGCAA GGAGTGGTTC
CCAGTGTTCT AGACAAGTCA GAACTTCGCA AGGTCAGTCC ACTGGGCAAA GCCCTAGTAC
ATTCTTACAT TTTCTTAGTT TGGTCGGGAT CTCGGGGTTG GCCTCGACGA AATCCGGAAA
CTGCGCCTGG ACCAGGTAGT CTGGGTTTGT CAATGGCTTC AGGACGCCGG AATGATCGAA
TGCTTTGAGG TGCAGGAGAA CCAAGCAACA GCCGAGGTGA ACCCTTTAGA ACCATTAGGT
CTCTGCCCTC CGTGTTGTGT ATGCCCTCGT CCAGCGATGG CCCAATGCCT CAGTCTCTCG
CTTCGAGGCC ATCCACAACC AAATTGCTAT ATTGTGCCAG GACAAGAATT TTTCCTGGAC
CAGGAAGATA GGGGCGTCAA TTTCTGCAAG TGA
|
|---|
| Protein sequence | MQLVHLLAAG LIPALVSALL RRDVDCLFAT TPANGATCQS FASNWGLSVS EFQELNPGTT
CPDIDTSKAY CVVGTVTADA PGTTLTTTTS TSTTTTPTNT TTTTQPPTAA NPTVPTPTMP
GIVDNCDSFY KVSSGDQCDN ISQRHSITTA QLRSWNSEIN TDCTNLWLDY YICIHVPGAT
TTSLTTTTTT NAIVTGPTPQ QTGIISNCNK YHLVESGDGC ASIASAYGIS LSNFYSWNPA
VGSSCGALWL GYYVCVGTSS SQPTPTSTTS QTTTATATTA PGPSPTQSGL IKTCTSYYKA
QVGDTCQAIV QEKYPYVNSL TLFVRWNPAV GSSCSNLLAG YYYCVATELH QPMPGINGRL
ELERNQSVMA ASPVGRPGRR KSEIVAEVMI SRKWPSIVPR TPSFVEHFRP FVHLSSLTFQ
RPPPVDSLFV YLSLFAAGPL KCDLFVSAFL VIEVDTHASQ LVNQFGGRLI RLISLYVEQS
SSVLEGAKKG GHIRWHILAE DQTQLSSNYR DGCLKTYSIK FWLDESVQGV VPSVLDKSEL
RKFGRDLGVG LDEIRKLRLD QVVWVCQWLQ DAGMIECFEV QENQATAEVN PLEPLGLCPP
CCVCPRPAMA QCLSLSLRGH PQPNCYIVPG QEFFLDQEDR GVNFCK
|
|---|
| |