Gene ANIA_10561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagANIA_10561 
Symbol 
ID
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameAspergillus nidulans FGSC A4 
KingdomEukaryota 
Replicon accessionBN001303 
Strand
Start bp1926417 
End bp1927510 
Gene Length1094 bp 
Protein Length196 aa 
Translation table 
GC content54% 
IMG OID 
Productsmall nuclear ribonucleoprotein SmB, putative (AFU_orthologue; AFUA_4G07740) 
Protein accessionCBF77432 
Protein GI259482702 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.199439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CACCCAAGCT CCTCGCCTGG CTAAACTCCT CCGGAGCGTG CAGGTATCGA AGTGATTACT 
AGCTAGAGTT CTCCTTCTAC TGAATTGGAT ATACACATTC TTTGGTTCTA CTCTAAAGTC
GCATTCGTGC GCACTCTTCA GCAAACATGG CGGCCAACAA GCAGGGCAAG ATGGTGAGTT
TTCCCTATTA CAGAGACTTT CTTCTACAAC CGGATTTTTC TGTATCGTGA AGTGAAGATT
GTCGCTAACA TTTATATTCT TTCAGCAAAA CCTTGTATGT TGTGATGGGT GTGTTGTTAA
TACGTGTGAA CATCTAACTC GGGCCTAGAT CAACTACCGG ATGAGGGTCA CCCTGAATGA
TGGACGACAG ATGACGGGTC AGATGCTCGC TTTCGACAAA GTGCGTCTAC TACACGATCT
ATGCGCATGT TACTCGTAGA CTTATCACTG ACTTTCCTAG CACATGAACC TAGTGCTAGC
CGATACGGAA GAATTCCGTC GCGTTAAGCG GAAAGCGAAG TCGGCACCCG GAAACGCGCC
CCTTGTCGAA GCCGAAGAGA AACGAACCCT TGGTCTTACA ATTGTCCGCG GTACTCACGT
CGTTTCTTGC TCTGTCGATG GACCTCCCCC GGCCGATCCC TCAGCACGGC TTGGAGGCGG
TCCGAGTGTT CCCGCCGCTG CCACCCTGGC CGCCGGCCCT GGAATAAGCA AACCCGCTGG
ACGTGGTCTG CCTGTCGGAC TTGGAGGACC TGCTGCTGGT GTCGGTGGAC CGCCGCCTCC
AGGCGGTTTC CCCGGATTTC CTCCTGGTGG TTTCCCTGGT GCCCCCCCAC CGGGCTTTGC
TGGACGCGGA GGCCCTGGAG GACCTCGTAA GTTGATTCTA CCCTGAAGTC TGATATATGA
AGCTGACAAG TGTTAGCCGG GTTCGCTCCT CCTCCCGGAT TTGGTGCTCC TCAAGCTCGT
AAGTACTCCC ATTGGAAATG TTAAAACTAC GTCATCTGAC TTCTACTCTA GCTGGCGGTT
TCCAGCCTCC ACCTGGCTTC CAGCCTCCTA GTCAGGGTCG GGGTTATCCT CCTCCAGGCT
TTGGAGGACG GTGA
 
Protein sequence
MRVTLNDGRQ MTGQMLAFDK HMNLVLADTE EFRRVKRKAK SAPGNAPLVE AEEKRTLGLT 
IVRGTHVVSC SVDGPPPADP SARLGGGPSV PAAATLAAGP GISKPAGRGL PVGLGGPAAG
VGGPPPPGGF PGFPPGGFPG APPPGFAGRG GPGGPPGFAP PPGFGAPQAP GGFQPPPGFQ
PPSQGRGYPP PGFGGR