Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ANIA_04546 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Aspergillus nidulans FGSC A4 |
Kingdom | Eukaryota |
Replicon accession | BN001303 |
Strand | + |
Start bp | 1692297 |
End bp | 1694180 |
Gene Length | 1884 bp |
Protein Length | 542 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | KH domain RNA-binding protein (AFU_orthologue; AFUA_2G02780) |
Protein accession | CBF77283 |
Protein GI | 259482624 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000459967 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0749815 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGACCA GGTTGGGGAG ACTTGAAACA GCATTATTAG GTACTTAAGT ATCGATATAT AAAGTTATAG AAAAAGTTAG AGATCAGAAC AGATTGTACA CTGAGCAAGG GTGCAGAGGT ATCGCAGTGG TTGGTTCCTC CCGCCCTGAA CACCAAACCA ACCACAACCA CTACCACAGC GGCGCCTTTC TTCATCCTCT CCCTCTTTTC ACCCTCTCCA CCTTCTCTTC TCCCCCATCA TCAGACTCCT CCTCCGTGTC CTCTCCATCT CTTTTCCTGT CTATCCCCTC CTCATCCTTC TCCTTCCTCC TCTCTTCAAC CTCTCTTCTA TTCCTCCCGT CAAATCTCCC GCTTCCTTCA ATCTCCTTAC AAATCCTCGC ATTCCTCGCA ACCTCCACCT TCCCCCGCCC GCCGAAACCC CTCTGGATTC GCCCCGATTC TCGCAGGTTT TCTCGCCTGA GGATTACATT TCCCCATATT GACCCTCTTA TTGTCCTTCT CGCTCCGCTT TCTTTGCTAC TCAGGCTGTA AGTAATGCTC TTGTTTGCCA GTTTTGTCAC CATTCTTTGC CGCGTCGGCG TAGTAACGGA TCAAAACTCC TCGGGCGCCA TTTCCGTTTG ACACTTGTGC AAGGAACAAA CGGCTGGCTG TGTACAAAGC TTCCTTACTG ACTCCATTGG AACAGCTTAA GTCATATCCT ACCTGTCTCC TCATCTACGA CACCTTTAAA ACTTGAGAAC ATGGACACCA CCGACATCCA CGAGACCCCC ATCGCCGACG AGACGATGAC TGATGCCGTC AACGTTGGTG ACGAGGGTGA TTTGGAAGTC GCTCCTAAGA CCGAAGAAGA GTATGCGCAG TCCATGCTGA CTCTTCGCGC CATCGTTTCT TCCAAGGAAG CGGGCGTCAT CATCGGCAAG GCGGGTAAAA ACGTCGCCGA TTTGCGCGAT GAGACTGGCG TTAAGGCCGG CGTAAGCAAG GTGGTTCCCG GCGTTCATGA TCGCGTCCTT ACCGTGACTG GTGCTCTGAG TGGTACTGCT AGAGCTTATG CTCTAGTCGC CAAGGGACTG TTGGAAGGAG CCCCGCAGAT GGGCATGGGT GGAATTGTTT CCAACAACGG CACCCATCGT AAGTCTTACC CATTATGTAC TCACAGACTT TGTCTTGGTC ATGGACGCCT GCTTACGTTC CTTAGCTATT CGACTGTTGA TTTCTCATAA CCAAATGGGC ACCATTATCG GACGGCAGGG ATTGAAAATC AAGCATATTC AGGACGCTTC GGGTGTGCGT ATGGTCGCTC AGAAGGAGAT GCTGCCTCAG TCCACCGAAC GCATTGTTGA AGTGCAGGGC ACCCCGGAAG GAATTGAGAA GGCCATCTGG GAGATTGGAA AGTGTCTTAT TGATGATTGG CAACGTGGAA CAGGAACGAT CCTGTACAAT CCCGCCGTGC GTTCGTCAGT CGGTAGCGGT TCGATCCAGC ATAACGGTGG CAATAGCGAC AGCTACAACA GCCGCCCTTA CAACCGTACC GGTAACGGCG CTGACTTCAG TGACCAGTCC GGCGGGTATG GCAGACGGTC CAACCCTGAT ACCAGCAACC GCGGCTACCC TCTCGTCACC GAGGATGGCG AGGAGATCCA GACGCAGAAC ATCAGTATTC CCGCTGACAT GGTTGGATGT ATCATCGGCA GAGGTGGAAC CAAGATCACG GAGATCCGCC GGAGCTCCGG GGCCCGTATT TCTATTGCCA AGGCTCCTCA CGATGAAACC GGAGAACGCA TGTTCACCAT CATGGGAAGC GCCCAGGCAA ACGAAAAGGC CCTGTATCTT CTGTACGAGA ACCTTGAGGC CGAGAAAACT CGCCGCAGTC AGCTGCAAGA GTGA
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Protein sequence | MLTRLGRLET ALLEKVRDQN RLYTEQGCRG IAVVGSSRPE HQTNHNHYHS GAFLHPLPLF TLSTFSSPPS SDSSSVSSPS LFLSIPSSSF SFLLSSTSLL FLPSNLPLPS ISLQILAFLA TSTFPRPPKP LWIRPDSRRF SRLRITFPHI DPLIVLLAPL SLLLRLLSHI LPVSSSTTPL KLENMDTTDI HETPIADETM TDAVNVGDEG DLEVAPKTEE EYAQSMLTLR AIVSSKEAGV IIGKAGKNVA DLRDETGVKA GVSKVVPGVH DRVLTVTGAL SGTARAYALV AKGLLEGAPQ MGMGGIVSNN GTHPIRLLIS HNQMGTIIGR QGLKIKHIQD ASGVRMVAQK EMLPQSTERI VEVQGTPEGI EKAIWEIGKC LIDDWQRGTG TILYNPAVRS SVGSGSIQHN GGNSDSYNSR PYNRTGNGAD FSDQSGGYGR RSNPDTSNRG YPLVTEDGEE IQTQNISIPA DMVGCIIGRG GTKITEIRRS SGARISIAKA PHDETGERMF TIMGSAQANE KALYLLYENL EAEKTRRSQL QE
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