Gene ANIA_04406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagANIA_04406 
Symbol 
ID
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameAspergillus nidulans FGSC A4 
KingdomEukaryota 
Replicon accessionBN001303 
Strand
Start bp2138525 
End bp2140339 
Gene Length1815 bp 
Protein Length263 aa 
Translation table 
GC content48% 
IMG OID 
Productintegral ER membrane protein Scs2, putative (AFU_orthologue; AFUA_4G06950) 
Protein accessionCBF77592 
Protein GI259482783 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.781425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.236289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GCTATTCCGA CTCCCTCACC CAGTCGTCAG GTACCGCCGT GTCTTTGGAC TCCCGCTGCT 
GGCCCAACCT CATCCAGATA ACTCCTCTTA TCTTGGGCTG ATTGCCCTTT GAAACAACCT
CCTAGTTTCT GTGCAGTCCT CCCACATAGC GAACAACCAT CACATTTTAC CACCATGTCC
ATCCTCCTCG ACCCCCCGGA CCTTGGCTTT AGACGTACGT CTCTAGGAGC ATTCTTGAGT
TATGATTCAA CCGGGCGTAT TGACTTGCGA ACTAGGCCCC TTCAATCGTG AAATATGCCA
AGTGTTGCAC CTCACTAACA ACAACCCGGA CGCCGTTGTC TTCAAGGTAT GCGCTTTAAT
GTACCGCGCA ATTCCTAAGT TGTACGCTAA CGTTTGTCAC TTTGTTAGGT CAAAACCACC
GCTCCCAAAC AGTACGTGAT AGATCCTGCC TGCTTCGCAG TCGAATCTCA CTAAATTATT
TTAAGCTACT GTGTCCGACC CAACTCAGGG CGGATAGAAC CAGGCAAGCA TGTGGAAGTC
CAGGGTATGC CTCCGTGTCT TGAAGATTTC TGCGGAACCG GGTGGTTGAT TATATGGACA
GTGTTATTGC AGGCCATGAA GGACGAACCA GCTCCGGATG CGAAATGCAA GGATAAGTTC
CTTGTTCAAA CTGTGGCGGT CACCAAGGAT ATGGAATTCG CCAATGTTAG CTCCATTGTA
TGTGTTCTTG ATACTTCTAC ATGGCATTCT CTAATTGACC TATAGTTTGA GAAAGCCACC
AAATCAGCTA TTCAGGAGCG CAAAATACGA GTAGCTTGGC TCCCCGCTGA TGAACCCGAA
GTCAAGCAAG AAGACACCAA TGGCACGGTA AGTTTTATTG TGGCTCACTT CCTAAGTTTT
TTTTTTACCC CAGCTCACAA ACTATTATCG CATCAGAACG CCCAGAATGA TGAAACTCCT
TCTTACTCTT CCCCTAAGGG AGATTTTGAG ACCCCGGCCG CCAATTTTGC GAAAAGTTCC
AACACAACTT CGCCCATACC CGCTCCGGAC TTCAACGAGA GTGTCAAGCG GGATTATCCG
ACTCCGCAAG TAGCTGAAAG CAAATCAGCA TCAGCGAAGG CTTCCGTGGC GAGCAGCGCA
AAGCAAACCG ACTACGAGAC TCGGTTGGCA GAAGCTAATG CACAAATTCA GCGCCTAAAA
GATAAGCTCG CAGACCAGGG TTTGCGACAG AGAAAGATCG GGAGTGAGAG CGAAAAGTCA
CCGGCAGCCC TCGCGCAGCA GGTTCAGTCT GTTGAGGCAG GTGTGCCAGT AAGGATTGTG
GCAGGTTTAT GCCTGCTGAG TTTCTTGATT GCGTATTTCT TTTTCTAACT TCTCGTTATT
CCCCCCATTT TTTTCGTTAC CCTATACTTA TTCCCTACTT CCACTACGGA CCACCTGCTT
TTTTTTCCCC TTGAGCCGTC TGTCTCTGAT TTTTCGTTTG TGAACACTTA TATCAAGCCT
CTTTTCTTTA TTTTTCTTCT TTCCTGTATG CTCTACGGCA ATTCATTTCG AGTACTACGG
CCTCACGTTG TTGATGTGAC GCGTGGTCAA TCTTATGGCA CAATGAAAAA CTAAGAAAGA
GCGCGAGAAA GCGGGAGACG AACTCGACAG GGCTGGTGCA GAGGCTGCAT GATCAAGTGG
CTAAGCAAGT TCTTACGTTC GCTATTAGTA TTGTGGCGTG TAGACTGATC TATCTCGTCC
TTCGATCCCA TGCCTCTGCC TTTTCCCGTT AAAACTTGAT GTAAATATTA TTCTCCAGGT
TACTATCACT TCTAG
 
Protein sequence
MSILLDPPDL GFRRPFNREI CQVLHLTNNN PDAVVFKVKT TAPKHYCVRP NSGRIEPGKH 
VEVQVLLQAM KDEPAPDAKC KDKFLVQTVA VTKDMEFANV SSIFEKATKS AIQERKIRVA
WLPADEPEVK QEDTNGTNAQ NDETPSYSSP KGDFETPAAN FAKSSNTTSP IPAPDFNESV
KRDYPTPQVA ESKSASAKAS VASSAKQTDY ETRLAEANAQ IQRLKDKLAD QGLRQRKIGS
ESEKSPAALA QQVQSVEAGY YHF