| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_04306 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001303 |
|---|
| Strand | - |
|---|
| Start bp | 2443171 |
|---|
| End bp | 2445390 |
|---|
| Gene Length | 2220 bp |
|---|
| Protein Length | 720 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | JmjC domain protein, putative (AFU_orthologue; AFUA_4G05980) |
|---|
| Protein accession | CBF77800 |
|---|
| Protein GI | 259482891 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.468079 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCTC AAAGGCCCCG CGCAGCGTTT GAACCGATAT CTCCAGCCTT GGATGCTGCG
GAATTGATAA AGTCTTCGCC CAACTTCGAA GAGGTGGTGC GAATTCATTG CGATGCCATC
GACGAGAATG GGCTTGAGAA CTTCGAGAAG CTTGTCCTTC TTCACGTCAT CGTTCGTGGA
CTACCTCTTG TTGTTGAGGG TTTTGATAAG AAGCTTGATA ATGCCATCTT TTCCGAGAGA
TGGCTGAGAA GTCATTACTC GGCGAAGCGT GAGTATTGAC GTTCGAGTCT AATTTAGCTC
GTGCTAAAGA GTCTACCTTG CACAGGAGAA GATGCCAGAG ACCTGACAGC GAAGAAGGCC
GTACCGCTCA CTATTGGCCA TTACCTGAAG AATATGTCCA TCCTTGCGAA CCAGTTCAAT
AAGTTCAACC ATAAAAACCC TGATCTCCAA AGACTATACC TTAAAGACAT TGATTGCCCG
AAGATCTGGC ATGACTTCTT GAAGAGCATC ATACCTCCAT TTCTATTTTA CCTGAACAAT
TTGGCGGAGC CGGAATTCTT CGAGAGTACA GGGCCCAAAA GCGCTCCATT CTCGAAGAAA
CGCAAGGTTT CACAGGAGCA GGTAGGCAAA GCCGGTGATT TGATGAGTTG TCTTCCAGAG
AACATGCGCG CCGAAAATCT GATGTGTTAC ATTGGTCATG AGGGAACGTA TACGCCAGCG
CATCAAGAGA TGTGTGCTAG TCTTGGCCAA AACCTAATGG TTGAAGCGTC AGATGGCTCA
ATTGAAAATG GAAAGGCAAC GAAGCCTGGC TCCTCATTAT GGTTTATGAC CAGCAGCAAG
GACCGGAACT CTGTGTCGGA GTATTGGATG ACAATGCTGG GCCACGACAT AAACCTAGAG
GACCATTTCG CACAGATTAA CGCGTGGAAA GCCGCACCGT TCACAACATA TATTGTCGAA
CAGCGGCCGG GTGACTTCAT CCTCATACCT CCCCTGGCGG CGCACCAGGT CTGGAACCGT
GGAACGCGAA CGATGAAAGT TGCATGGAAC AGAACGACGG TGGAGACTCT CGAGAGGGCG
TTGAACGAAG CGCTTCCGCA TGCCAGAGTG GTGTGTCGGG ATGAACAATA TAAAAACAAA
GCGATAGTAT TCTACTCGCT CAAACAATAT TCAACACGTC TCAACAGCGT TGATGCTAAT
CGCAGCCCCG CGAGAGTACA GCAGCTGCAG AACGAATTTG AACAATTGTT CTCTCTGTTC
AACCAAATTC TGCTTTCCGA ATCGTTTTCC ACGGCGACAC CTCATGAGAA GAACGTTGAA
TACATACCTT TTGACAGCAA TATCACATGT GCCTACTGCA GAGGGAACAT CTTCAATCGG
TTCCTGACGT GTCCCTCATG TGCCACAACT GCGACGGGTG TTGAGCTCCC CTATGATATC
TGCATGGAAT GTTATGTTAT GGGCCGAAGC TGTGCATGCA TCTCGGAATT GAAATGGGTT
GAGCAATTTA AATGGGAACA ACTCCTGAGA ATGCACGAAT TCTGGAGGCA GCAGGTTCTT
AGGTTCGACC CTGAACTTGA CAAGAAATAC CGACAATTTC GGGTTGAGAA GGAAGAAATG
GGCAAAAAGA GCCTGGCCCA CATATGCCAG GAAGAACTGA AGCGGCGTCC GTGGGTTGAT
ATCTCGAAGC CGAAGCCCAT AATGGAAGAG CTGGTGGACG GAATTAGCGA ATTGGAAGAT
GATACCCGCC CCGCCAGACG CAGGAAGAAG TCGAAATCGA AAGGCCCCAA ATGTCACATT
TGCAAGTACG TTGAGCCGGA GTGGAAACTT GCCTCCTGTT CGAATCCCAA ATGCTCTTTG
AGGTACTGCT ATGGTAGTCT GTTTAGAGCG TTCAATATGC TACCGCAGGA AGTTCTGGAA
ACTTCTAAAT GGGAGTGCCC AAGATGTCAA AAGTTCTGCA GCTGTGGCGG TTGCCGCAAA
AATCCCCAGA TGACTCCTTT TGAGCCCACG TGTACGTCCC TCGGTCATGA CACAAGCCAA
GTTGCGGACG TTCGCAGCAT TGAGGCTTTG GTGGATTTTG GGCACTCGAA TCTCGGCTGG
CTGAAGAAGG CCAGCAGTGA CGAAATAAGC CGGTTGAGCA AGCATCAAGA AGAAGCGGAC
GTTAAGCGCA ATCAAGCTTT GGAGATAACT CAATACAGGT CGCGTTCTAC CCTGACGTAG
|
|---|
| Protein sequence | MPAQRPRAAF EPISPALDAA ELIKSSPNFE EVVRIHCDAI DENGLENFEK LVLLHVIVRG
LPLVVEGFDK KLDNAIFSER WLRSHYSAKR EDARDLTAKK AVPLTIGHYL KNMSILANQF
NKFNHKNPDL QRLYLKDIDC PKIWHDFLKS IIPPFLFYLN NLAEPEFFES TGPKSAPFSK
KRKVSQEQVG KAGDLMSCLP ENMRAENLMC YIGHEGTYTP AHQEMCASLG QNLMVEASDG
SIENGKATKP GSSLWFMTSS KDRNSVSEYW MTMLGHDINL EDHFAQINAW KAAPFTTYIV
EQRPGDFILI PPLAAHQVWN RGTRTMKVAW NRTTVETLER ALNEALPHAR VVCRDEQYKN
KAIVFYSLKQ YSTRLNSVDA NRSPARVQQL QNEFEQLFSL FNQILLSESF STATPHEKNV
EYIPFDSNIT CAYCRGNIFN RFLTCPSCAT TATGVELPYD ICMECYVMGR SCACISELKW
VEQFKWEQLL RMHEFWRQQV LRFDPELDKK YRQFRVEKEE MGKKSLAHIC QEELKRRPWV
DISKPKPIME ELVDGISELE DDTRPARRRK KSKSKGPKCH ICKYVEPEWK LASCSNPKCS
LRYCYGSLFR AFNMLPQEVL ETSKWECPRC QKFCSCGGCR KNPQMTPFEP TCTSLGHDTS
QVADVRSIEA LVDFGHSNLG WLKKASSDEI SRLSKHQEEA DVKRNQALEI TQYRSRSTLT
|
|---|
| |