Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ANIA_08088 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Aspergillus nidulans FGSC A4 |
Kingdom | Eukaryota |
Replicon accession | BN001302 |
Strand | + |
Start bp | 709481 |
End bp | 711590 |
Gene Length | 2110 bp |
Protein Length | 593 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | C6 transcription factor, putative (AFU_orthologue; AFUA_7G00410) |
Protein accession | CBF73860 |
Protein GI | 259480847 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000100415 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGCAC TCATATGCCC TGCTCGCGCT GTCGCGCAGC AGGGTATGAG CATGAATGTG TGTTGGACAC GATTAATAGA CCACGCCCAG CGGAGCGGCG AAGGCATGCG AATACGGCAC GGTAAGCTGC TTTTCCCAGG AGGTCGCTCG GCGACTGCTG ACCGTCAATA CTGGGATAGC CAGCGGAGCA GCTTTGACAC GGGCTTGGGC GTCAGTCCAA GAAGCAACAT ATCTGTACCA AGCAACCACC TGGAAAATAT TGAACTGCAG CAGTTCAGTC CGCAAGACAT GATTGCGCCA CAGTCGGTAA TGCACTCAAT GTCGGTGAAC ATGAGAGAGG ACTCTCCGAT TTTCCTGGGT GATTCGGACG TGTCCGATCC AAAGGGCGAT ATCATCTCGC GTGGAATCAT AAGCGAGGAG GATGCCCGGT GCATTTACGA AAGGTCAAGG GACACCGTTC GGGATTAATG ATGCAGTCAC TGACCGAGTC TTAGATTCAT GAACTGTAGC AAGAACTTCT TACCTCTGTT TGACCCGGTC CGAGATACCT TCGACTCTAT CCGGTCGCGA TCGCTCTTCT GCTTCACGGT GATTATCTAC CTGGCGAGTC GTGCAGCGTC AGATTTCCGG GCGGACACTC ATCTGCAACG GGTGCTACAG GATGAAGCAC AGCGATTGGC AGAAGACTCC TTCTTTGCAA AACCAACCAA GCTGGAGACT GTTCAAGGGA TGATTCTCCT TGCGGCGTAC TCAGAAAAGA CCTGGTTTTC GACCGCGCTC ATTCTCCGGA CCGCGTTGGA TCTAGGTCTT GAAAAGTCTC TTGACACCCT GCTGGCTCAA AGCTCACCAC CGAGAAGCTA CCTATCGGCG CGGATGGAGG ACCGACAGCT CGTTTGGCAG ACACGCACGT GGCTGATTTC GTCCACTCTC GAATTGGACG TCGCTAGTGG AACAGGGCGG AAATCACGCC TCGGCGATGT TGATATCTCG AAGCTGCGAA AATTTCTTGA TTACCCTCTA TCTCTTCATA GTGACATGCG GACCGTTTCT ATTATTGAAT ACCATCAGAT CCGAACAAGA GGGCGGCAGA TAATCGAGAA CTCAGCAGCC GCTCCGATCA TACATACAGA GCTTCCAGCA ATCATGCGGA AGCTCCAGCA ATGGTGGGAG GAATGGGATG AGCTACACCA TCGTAGGTTC TACGTTTATA TTTTTTTTTC TTTGACATCT ACTCACCACA GCAGAAAATG CCTTTCATCC TGGTGCATTT CAGCGCTCGT CTTTAAAGCT GATGTTAAAC TATGCCAAGG TGGTAATAAG CCGTCGAATT AAAAACCCAG GTTAACGCAT GCAGGTTTTT ACGTACTGTG CGGCCATAGC TAGAATACAG AAACTGCAGC AGACCCCGGA AGGTGATCAA GGCATCAGCT CTGATGCTGT TCTAGGGCTA TGGAAGTCAC TGGTCGAGGT AATCGAGAGT CAGTTGACGC TATTAGTGAC GGAGTCGGCT TATCGATGCC AACTGGTCTG GGCCCCGACT TACCCAGCCC TAACTATTGC TTTCATCAGT GAGTGCCGGC TGCACCGACG CTCAAAAAAC GACCATGCTA ATGTGGCTAC AGCAACGTTC GCCATCAGGG TGGCGCGTTG GCATCCTACA CTAATTAACC GGCGATTGGT TCTGCAGCGT GTCCGGCAGA TCCTGGAGTA TCTCAAGCAG CCACCCTACC CTGACATTCA CAGAACAGTT CAGATATTTG TCAACTACGC TGGTGCTCTC CTCGCGGAAC AAGACCTATG TAACGACCAT GGTCAAGCGA TTGCCGCTCA ACCGTCAAGA ACTCCGGAGG TGAATAGCAC GCCTAGGTCG GAGTTCACCA CCAGCATTCC TGAGCAAGCT GCTGAGAACC CAATGATACG GATGGATAAG GACACGGATC TGACCGCTCC TTTGCCATCG GAGTCGAGGC CTGAACCAGT TCTGCCTAGG CTTCTGGGAT TCGATATCCC AAACTGGAAT CTAACTGCAC CGATCGCCGA CTCGTTTGAC CTGTTTGAGG AAGGCCAAAC AGACATCTTT GACTTTCTTC CTGACCTATG CCGGACATAA
|
Protein sequence | MPALICPARA VAQQDHAQRS GEGMRIRHGK LLFPGGRSAT ADRQYWDSQR SSFDTGLGVS PRSNISVPSN HLENIELQQF SPQDMIAPQS VMHSMSVNMR EDSPIFLGDS DVSDPKGDII SRGIISEEDA RCIYERFMNC SKNFLPLFDP VRDTFDSIRS RSLFCFTVII YLASRAASDF RADTHLQRVL QDEAQRLAED SFFAKPTKLE TVQGMILLAA YSEKTWFSTA LILRTALDLG LEKSLDTLLA QSSPPRSYLS ARMEDRQLVW QTRTWLISST LELDVASGTG RKSRLGDVDI SKLRKFLDYP LSLHSDMRTV SIIEYHQIRT RGRQIIENSA AAPIIHTELP AIMRKLQQWW EEWDELHHPR IQKLQQTPEG DQGISSDAVL GLWKSLVEVI ESQLTLLVTE SAYRCQLVWA PTYPALTIAF ITTFAIRVAR WHPTLINRRL VLQRVRQILE YLKQPPYPDI HRTVQIFVNY AGALLAEQDL CNDHGQAIAA QPSRTPEVNS TPRSEFTTSI PEQAAENPMI RMDKDTDLTA PLPSESRPEP VLPRLLGFDI PNWNLTAPIA DSFDLFEEGQ TDIFDFLPDL CRT
|
| |