| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_04285 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001302 |
|---|
| Strand | + |
|---|
| Start bp | 1455079 |
|---|
| End bp | 1458715 |
|---|
| Gene Length | 3637 bp |
|---|
| Protein Length | 802 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | Pumilio-family RNA binding repeat domain protein (AFU_orthologue; AFUA_5G04340) |
|---|
| Protein accession | CBF74323 |
|---|
| Protein GI | 259481100 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.428204 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TGCTTCCCAA TTGCCCACCA GTACCTGCTT CTTGAATTTA TTCCGCGTTC TATTGCTCGA
ATCTCTGTAT CTCACTTTTG CTGATCTGTT TTCTAGATAC TGCCATATAT CTTGCGCTGT
CCGAAGAAAA CAGCAGTAAA CAGCCCTCTT CTTTTCTCCA TTATCTTTGA CGCATCTTCT
TCTCCAAGTT GCCATTCATT GCATGTAAGA GCGTTTGGAT CTTATGCAGC GTGCTTGTCT
ATTGACCAAC TTGATCTCGA CTTCTTTGTT TACTTTTTCC AGTCGCCGAC TTCTGTCGAA
AACAGCCCAT TGTGCCCTAT CGATTCAACA TGTCCTTGCT TTCAGCTGCC TCACCGGAAA
CTGGCCGTAG AGACCACGAT GAGAGAACGT CTTCCAATAG CGGAAATGTT GAAATTCACA
CGCTATCTGG TGGACGTGAG ATATCAGTAA GTTAACATAC ACTTGCCATC GCAGTATAAA
CCGGACGGTT AATGAATTCT TAGGGTCACA AGCACTCAAA CCCCTGTATC AGCTCTCCCG
ACCCTTTGGC TACTTCGAAG CTTGGGAACC TGCAGTCCCC CGTCGGCCAG AAAAATGACA
ATGCTTCCAA TAAGGTCAGG TTACCGTTGC TCTTGATTTT CCTTGGCAGA TAGTGTCTGA
CAATCCTAGA AGCAGAAGTT GGAACATACA AGCAATACCC TTCCTCTGAC GGGAAATTCT
GAAATGGAAA GGCTCCTGGC GAAGCTTTCG CCAAAGCCCC AGTTGTCAGA CTCCAAGCAA
ACGATCAACC AGGATATCCT CTCAAAGTTG TCTGAGCAGC AGCTACTCCT CGACCAGCAA
AAGAGTATTT TGGCGAAAAA TAAAGTTGTT GGCCCAGGGC ATCTCGAAGA GCGCGATAAA
CCTCTCACCA TGCCACAGCG TATGGACGCT AAACAGGCTG CTAGCCCCAA AGAAGTTGCG
CGTTTCGAGG CTTTCGACAC CGAGGGTTCC GAGTTGCTTC GTCTAAAGCG GGAACTCCAG
GCTGCTAACT CCAAAATCGC CCTACAGGAG CAGGAACTAG CACAAACCCG TGTTATCAAA
CATACTTTGG ACCAGGCCCT TGGTCCTCCA TCCGAAGCTG ACTTTAGCGG ACGGGATATA
AGCGAACAAA CAATCAGCAA TCTGCAGAGC GCCTTCAACG CATCCATACC GGCGCCGCAT
CTACTTCAAG ACGGTTGGAA TACGCAGGAA GATTCGCAGT CAGATATATC CGATGCACTC
TCCGCCGGTG CTTACAATAG ATCCAGGGGA TTTTGGGGCC CTCCTGCTCA GCAAGTTTAT
GGTGTGGGAT TGAACTCAGA TAAAGCCTAC GCTGATAGCA ATATGCCTCT CCCTGGCACT
GCTTTCGGTC ACGATTCGAG CAGATTTTGG GGTCCTTCAA ACACAAACCC CTCGATTCCA
GCGAACAGTT CTTTCCAACC CCATCGCGTG CTTTCAGGCC CATCCACAGC TCCTTGCAGC
TTTGATGGAC CTTTCTCCGA CGACCAAGGT AGGTATTTGC AAAGTTCAGG TTTTGGCCCG
CGCCCTCCAA CAGCCCAGCC AAGTCGTATT GGGTCATGCT TTCCTGGGAC AGGCTCTCCC
TGGGGTACAT TTGCTCCTAG CTCGGCCGAC AGTCAGGGTT CTCGATCACC GCCGAGTAAA
CCGAACAGTA CTTATCAACA AGTAGGACTT TACCCTTTGC CCCCCTACCA TCAGCGGGCA
GTTGCACCTC CGCTCTCACC GACAGCGACC GAGTTTTCAG CACCTAGTGG AACCTCTGTA
CCCTGGGCAA CCTCATCTGT GTGTAACACC GATTCTGATC TTCGTGCTCG ATTGACAGTT
TACAGGTCGG CGGAAGCTCC ATTCAAACGT ACATTTCACC TCTCGAACCA CTTAATTATC
GGCGACTGTT AGATAAGAAT GTTTCTTGTG ATTGGAAATA CATAGTCGAC AAGATTGTTT
GCAACAATGA CCAACAAGCC TCTATATTCT TGCAGCAAAA GCTCAAAGTC GGCACAACAG
AGCAAAAATT CGACATCATC GAAGCCATCA TCCAACAGGC TTACTCGCTC ATGGTGAATC
GATTCGGAAA CTTCCTTGTC CAGCGTTGTT TCGAACACGG AACTTCTGAG CAGATCGTCG
CAATTGCGAA TGCTATTAAG GGTAACACTT TGAGCCTCAG CATGGATCCT TTCGGCTGCC
ATGTAGTCCA GAAGGCCTTT GACTGCGTGC CTGAGGAACA CAAAGCAGTC ATGGTGCATG
AACTTCTGCG CAGGATCCCT GAAACAGTCA TTCACCGGTA TGCGTGCCAT GTATGGCAGA
AGCTTTTCGA ATTACGCTGG AGTGGTGAGC CTCCGCAAAT TATGGCAAAG GTCAACGAAG
CTTTGCGCGG GATGTGGCAT GAGGTTGCAT TGGGAGAGAC TGGGAGCTTA GTGGTTCAGA
ATATCTTTGA GAATTGCGTC GAAGACGAAA AGGTATGACT TCGCTGCATT TTTGCCTCTC
CTTTACGAAG GCTTTCTAAC CACACCATCT AGCGCCCTGC CATTGAAGAA GTCCTAGCGA
AGATCGATGT GCTTGCTCAT GGTCAGTTTG GAAACTGGTG CATTCAACAC ATCTGCGAGC
ATGGTGCCCC CCACGATAAG AGTCGTGCTA TTGAGCATAT TCTTCTCTGG GTGGTGGATT
ATAGCATGGA TCAATTCGCG TCTAAGATCG TGGAGAAATG CCTAAAGATT GGCGGCTCAG
AATTTTTAGA CCGCTACCTT TCTCGAGTAT GCACTGGTCG TACAGATAGA CCTAGAATGC
CGTTGATTGA CAGTAAGTGT ACTTTCTTCT TGCGTGGACA ATGCTCTGAA CTGCAACAGT
TGCCGGAGAC CAGTACGGGA ATTACCTGAT TCAGTGGATT CTAATGAATG CTGCGCCCCA
CCAGAGGGAG CTGGTTGCAA CTCATATCCG GTAAGACTAT TCAGCCGCAA CAACTCGTAT
TTCTTTCTAA CCATCTCTCT TAGGAAACAC ATGGTATCTT TGCGTGGCTC TAAATTCGGT
TCGCGTGTGG CAATGCTATG TTGCAATCTG TCTCATGCTA CTCGCCCAGG TCCAGGGACA
GGCGTGCAAA TTGGTCGGTT CAATAATTTC AACGATGACC GGTTCCAGGC ATCCAATCAA
CATGGGGGTC GCTTCAGCCG AGGAAGCCAG TGGAATCCCA GCTACCCCCC TTTTCGTTAA
GAGATTGACA AACCAAGTGT CGCAAGACCT GAAACATCTC GAAAAGTACG AACCGGCGCG
ACCTACCCAA GACATAGATT CGATCTTAGA TGTGATTTGT GTGCATGAAT GCCCTGCGAA
TCAGACTTCG AGCTTTCCAG ATTTACATGG TTGCACGAGG CTGAAAAAGC TTGACATCCT
ATGCCTCGTG CTCATCTCAT ATACTCATCT CGTTGAACTC TTAGGCTCTT TACTGTTCAT
TTTATCCATT GTCCGCGCTC CACATGTCCT GCTCCAGGGA AGTCGATGGG TATGTATTAT
TTTTCGTGAA GACTGTCCGC ATTCTGCATC TTAGAGGTAC AGTGACGGAA GTACGGAGTG
TCTACGGCAG TGGAGTGTCT GCGGGACGGC TTTGTAA
|
|---|
| Protein sequence | MSLLSAASPE TGRRDHDERT SSNSGNVEIH TLSGGREISG HKHSNPCISS PDPLATSKLG
NLQSPVGQKN DNASNKKQKL EHTSNTLPLT GNSEMERLLA KLSPKPQLSD SKQTINQDIL
SKLSEQQLLL DQQKSILAKN KVVGPGHLEE RDKPLTMPQR MDAKQAASPK EVARFEAFDT
EGSELLRLKR ELQAANSKIA LQEQELAQTR VIKHTLDQAL GPPSEADFSG RDISEQTISN
LQSAFNASIP APHLLQDGWN TQEDSQSDIS DALSAGAYNR SRGFWGPPAQ QVYGVGLNSD
KAYADSNMPL PGTAFGHDSS RFWGPSNTNP SIPANSSFQP HRVLSGPSTA PCSFDGPFSD
DQVDKIVCNN DQQASIFLQQ KLKVGTTEQK FDIIEAIIQQ AYSLMVNRFG NFLVQRCFEH
GTSEQIVAIA NAIKGNTLSL SMDPFGCHVV QKAFDCVPEE HKAVMVHELL RRIPETVIHR
YACHVWQKLF ELRWSGEPPQ IMAKVNEALR GMWHEVALGE TGSLVVQNIF ENCVEDEKRP
AIEEVLAKID VLAHGQFGNW CIQHICEHGA PHDKSRAIEH ILLWVVDYSM DQFASKIVEK
CLKIGGSEFL DRYLSRVCTG RTDRPRMPLI DIAGDQYGNY LIQWILMNAA PHQRELVATH
IRHPINMGVA SAEEASGIPA TPLFVKRLTN QVSQDLKHLE KYEPARPTQD IDSILDVICV
HECPANQTSS FPDLHGCTRL KKLDILCLVL ISYTHLVELL GSLLFILSIV RAPHVLLQGS
RWRYSDGSTE CLRQWSVCGT AL
|
|---|
| |