| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_03890 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001302 |
|---|
| Strand | + |
|---|
| Start bp | 2706621 |
|---|
| End bp | 2709651 |
|---|
| Gene Length | 3031 bp |
|---|
| Protein Length | 951 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | DNA repair protein Rad4, putative (AFU_orthologue; AFUA_2G04860) |
|---|
| Protein accession | CBF75160 |
|---|
| Protein GI | 259481542 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.846946 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCCC GGACGCGCCC CGGCCGCCTT GCATCGCGCG GAACTCCCCG TAGTCGCCGA
TCGAAACAAG CCGAAGACGA AATACCAGAG GTCTACCGGG AGATGCTAGC GGAGGCTGAA
GCGCAGGAAA TAAGCCAGTC AGAGAATGAA CGACCGGCTA AAAGATTCAA GCCGGCAGGA
TACAGGGCTC GGACTGCCCA AGCTTTCAAG GCGCAAGTCC TACAACAGGA TACAAACCCC
ATGGATGCCG AAGAGGATGC GGTCAAGCAA CCGCAGATTG TATATAATTC ACCATCAGAG
TCAGATGAAT CAGATATGGA GTGGGAGGAA GTCGATATAC AACAGCCTAC TATTTCAGGT
CCAACCTCGT CCGTGACGGA TGAAGCACCG CTTCAAATTA CCCTTGAGCA GGACCACAAT
CGGAAGCGAA GGGTTGTCCG GCGCAAACCA GTAACTGCGG CAGAGAAGAA ACTCCGACTT
GATGTCCATA AGATGCATCT GCTCTGTCTA ATGTGCCATG TTCAACGTCG TAATTTATGG
TGCAATGACG AGGAAGTACA GGTGCGTTGC ATCCTATCCT CATCTGAACC TTCTAAGTGT
ATTGTAGGGA TCTCTTAGAA AAATACTATC GAAGCATATA AGGTCGCAGT TGAATCCACC
TGAGGAAAAG CCGCAGCATA CTAGATCAGC AATGTTCCTT GACGGCCTAA ACCAGGCTGG
GGATATATTC TTTAGAAGGT TCAAGATCAC AAGACCTGGC TTACGGCGTG CACACTGGGC
GAACGACCCC GACTCGTTGA AGCGAAGAAC GGTAGGCACT CGTTCCTCTA ATCAGACTTT
GCTAATATGC TATAGGAGGC TATCATCTCT GACGCCGAAG TGTTCCTGTC ATTAGACGAC
TTTCGCGCTC AGGCCAAGAC TATGCAAGGC TCTCGGGATT TCGGCGCTCA GTTGTTCTGT
GCACTTCTTC GGTCGGTTGC TGTCGAGGCC AGGTTGGTCT GCTCTTTACA GCCGTTGCCG
TTCTCGGGAG CCATGCAACC TCCGCAAAAG CCAGAGCCGG AACCTATCGT CATATCTTCT
GACGATCCCG ACTCGCTGAC TGATGGTTCA ACCAAAAGTG AGGCAAAACC AGCGCCTATT
CGCAGGATTG GGCGGCCGGG TTTCAAGCCA ACGGGAGTGC AGAATACCAC TGTTCTCTCT
TCACGTACGT CCCTCGACCG GCTTAATGGC TTTACTGACA ATTACAGGAC CCACTCGGAG
TGAGTCCTCA TATCCGGTTT TCTGGGTGGA GGCATTCAAC GAAGCCTTCC AGAAATGGGT
CGTTATTGAT CCCATGGTGA CGAAAACGCT CGCAAAACCG CACAAACTCG AACCCCCTGC
TACCGATCCT TATAACCTTC TGAGCTACGT CGTAGCTTTT GAAGAAGACG CATCAGCAAG
AGACGTCACC CGTCGCTATA CTAGAGTGTT TAACGCCAAG ACCCGTAAAC TACGGGTTGA
ATCGACCAAG AATGGTGAAG CTTGGTGGAA AAGGGTCCTC GAACACTTCG AGAAGCCATT
TTTGGAAGAC CGCGATGAGC TAGAAATAGC CGAGCTGACC GCAAAGACAG CCTCCGAGCC
TATGCCGCGG AACGTGCAAG ACTTCAAAGA CCACCCTATT TATGCGCTGG AGCGGCATCT
ACGTCGCAAC GAGGTTATCT TTCCCAAGCG GGTTACTGGT CATGTTAGCC TAGGAAAGTC
TGGTGGGAAG GGTCAGACGG AGCCGATCTA TCGTCGCTCA GATGTCCATA TTCTGCGCAG
TGCGAACAAG TGGTACCGTT TAGGCCGCGA CATAAAGGTT GGCGAGCAAC CGCTAAAGCG
GATACCAGTG AGAAACAGGG GAATGGCCGT GGATGATGAG GAAGAAGGCG AAGAAACTGC
TCTCTACGCC TTCTTCCAAA CGGAGCTGTA TAAACCACCA CCAGTCGTCC AGGGACGAAT
ACCAAAAAAC GCATTTGGAA ATTTGGATGT TTATGTACCG AGTATGGTTC CCGCTGGTGG
TATTCATATC ACACATCTAG ATGCTGCGCG GGCTGCCCGA ATTCTAGGGA TCGACTATGC
AGACGCCGTT ACCGGGTTTA GTTTCAAGGG ACGCCACGGC ACAGCTATCA TCAAAGGGGT
AGTTGTCGCA AGTGAATATA AGGAAGCAGT CGAAGAAGTC TTGAAAGCAC TCGAGGAAGA
GAAACTGCAG AATGAGCAGG AAGAAAGAGC CGTCGAGGTT CTGCGAGCAT GGAAGAACCT
CTTAATGAAG CTTCGGATTG CTGAGCGAGT GAAAGGCTAT GTTATTGAGG GTGAAGCGGA
TGACGAGGCG AGTGGGATGG AACAGGGCGA GCCACAGGGA GCGGGCGGCT TTCTTCCTGA
ATCTGATGCC GAGACGGTGA CCCCCCAGCC TAATCCTCGA CCACCAAAAG AGCATTCCGC
ATATGACGGG GAGGTGGGGG GTGGGTTTCT ACCGGACTTC AGTGCGGAAG GTCATTCACT
CGTGGGCGAA TTACGCAGAT ATAGAACCTC CCATGGCGAC CAGCGGGATC AGCTTGTATC
TGCTTCATTG AGCGACCTGG GGGGCGGTTT CGTTCCAGAG GGCGATGGTC TAAACCCAAC
TGTTCGTGAA CCTCCTCGCA GGGTCAAATC TCCGCCTTTA CGATATGACC TTATCGTCGT
GCCAAACAAC GCAGACATTC CACCAGCCGA GCGGCATTCT ACCATTGGTC AACCCCAAAA
TGCAAATCCA GCGCAAGCGC TCTCCGCCGT CACAAGGGCC TTGGGAGGCT CAATTGACGA
GCCTATCACA GTAGCCTCGT CAGTCAACGA CTCTGCGTCC GCCAGTGTCG AGATTCTCTC
TCGCGCACCT TCACAAGTCC AGTCCCGCGC GCAATCCGTG GAAGTTGCAT CTCAGGCCTC
TGAACACGAA GATGAAGAGA ATGAGGGTTC TCTATTATCA GAAGACCCTG AGGATGAGGA
TGCGGTTCCC GAGTGGCTTA TGTCTGATTG A
|
|---|
| Protein sequence | MSSRTRPGRL ASRGTPRSRR SKQAEDEIPE VYREMLAEAE AQEISQSENE RPAKRFKPAG
YRARTAQAFK AQVLQQDTNP MDAEEDAVKQ PQIVYNSPSE SDESDMEWEE VDIQQPTISG
PTSSVTDEAP LQITLEQDHN RKRRVVRRKP VTAAEKKLRL DVHKMHLLCL MCHVQRRNLW
CNDEEVQLNP PEEKPQHTRS AMFLDGLNQA GDIFFRRFKI TRPGLRRAHW ANDPDSLKRR
TEAIISDAEV FLSLDDFRAQ AKTMQGSRDF GAQLFCALLR SVAVEARLVC SLQPLPFSGA
MQPPQKPEPE PIVISSDDPD SLTDGSTKSE AKPAPIRRIG RPGFKPTGVQ NTTVLSSRPT
RSESSYPVFW VEAFNEAFQK WVVIDPMVTK TLAKPHKLEP PATDPYNLLS YVVAFEEDAS
ARDVTRRYTR VFNAKTRKLR VESTKNGEAW WKRVLEHFEK PFLEDRDELE IAELTAKTAS
EPMPRNVQDF KDHPIYALER HLRRNEVIFP KRVTGHVSLG KSGGKGQTEP IYRRSDVHIL
RSANKWYRLG RDIKVGEQPL KRIPVRNRGM AVDDEEEGEE TALYAFFQTE LYKPPPVVQG
RIPKNAFGNL DVYVPSMVPA GGIHITHLDA ARAARILGID YADAVTGFSF KGRHGTAIIK
GVVVASEYKE AVEEVLKALE EEKLQNEQEE RAVEVLRAWK NLLMKLRIAE RVKGYVIEGE
ADDEASGMEQ GEPQGAGGFL PESDAETVTP QPNPRPPKEH SAYDGEVGGG FLPDFSAEGH
SLVGELRRYR TSHGDQRDQL VSASLSDLGG GFVPEGDGLN PTVREPPRRV KSPPLRYDLI
VVPNNADIPP AERHSTIGQP QNANPAQALS AVTRALGGSI DEPITVASSV NDSASASVEI
LSRAPSQVQS RAQSVEVASQ ASEHEDEENE GSLLSEDPED EDAVPEWLMS D
|
|---|
| |