| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_03874 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001302 |
|---|
| Strand | + |
|---|
| Start bp | 2756975 |
|---|
| End bp | 2759608 |
|---|
| Gene Length | 2634 bp |
|---|
| Protein Length | 863 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | raffinose synthase protein Sip1, putative (AFU_orthologue; AFUA_4G08250) |
|---|
| Protein accession | CBF75193 |
|---|
| Protein GI | 259481560 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTTG ATCTCACATG CTACCCTCCT CTGGGCAAGG TAACCTGTCT TGAGGCTGAT
AAGGTATGTT TCCCGCATCA GCTGGTTCAC CGCTGATTGA AACAGATCAG ATTCACCATC
CTGATAGAAC CAGCATCCCA AGGACAATAT GAATTCCAAA TTTGGCATAA TATAGGCCTC
TCTGAGTGGG CAGCGCTGCC GCTCTCGGAG TATCCATCGG CCGCTCTCCC GGCTTTAAGC
AGTCGACAGG ACCCAGGCAA TCGCGGTGTT TTTGCAGGCG AGATATCTTG TCCGCAGGCA
AGATACGCGG GCAGGTTCAC CGTTCGGTAC CGTGAGGGTT CCGAAGGGGA ATGGCGATGG
GCAAACAAGG AACGAGGCTG TCATGACGGC GAACTGGTCA TCGTCTCACG CGGTCTCTCA
TCGGAACTCG CATTGTCTTC CGCGCAAGAT TTCGCGAATT ATTTTGACGG CCTGTCCCCA
GATATTCAGG TTGAAGTCAG GAAGAGCGAG GCACCTGGGG CCGCGTTGTG GAACATTTCC
GGTCCAGTCG AGGAAGCTAG GGATGGTCAC TCGGGACTCC TTCGTCTGCC GCTCGGCACA
CCTTCCTCCA TGTCAAGATT CTTTGCCCTT GCCCGCGTGG AAACCTCGTG GCTGGGCCCG
AGACAGGGGA AAGACAAACT TAATTTCACA GAGGATGCTA TCCTACTCTC CTTCCTCCGC
ACGGACGGGG TACATGTCGT GCTTTTGGGC GTCACTGTAG ACGACACTCT TACAGTTCTT
GGGTCCGGCC CAGCAGGCGA GGTGGTCATC AAGTCGCAGA ATGATAATGC TACGCCGTCT
CGATTCCAGG TCCTGGCTGC TACTGCTGCC GATTTCGAGG TTGCCACGAG TGCTTTGATT
TATGAAGCAA GGAGGCTTGT CCGTCCGTAT GAAAATACAG CCCAGGGTGG CCCTCGAACA
CAATGGCTCT CGGAATGGTA CGACGGCCTG GCGTACTGCA CCTGGAATGG ACTTGGACAG
GACCTGTCTG AAGAAAAGAT CCTTTCAGCC CTGGATGACC TAAAAACCGC CGGTATCAGA
ATTAGAACAC TTATTATTGA TGACAACTGG CAATCACTCG ACAATGAAGG GGCAGGTTCA
TGGCACCGTG CTTTGACCCA GTTTGAAGCA AACTCCAAAG CATTCCCAAA TGGTCTTGCG
AAGGCAGTCA CCACCATACG GGAGCAACAT AGAAATATTG AGTATATCGT GGTGTGGCAT
GCGCTTTTCG GTTACTGGGG CGGCATTTCA CCAGAAGGAT CCCTGGCAGC AATCTACAAA
ACAAGAGAAG TGGCACTCAA TAGCACGACA AGGCCGTCCA TGCTAACAAT CGATCCTTCC
GATATCCAAC GTTTTTACAA TGACTTCTAC GCTTTCCTCT CCAGATCCGG AATATCAGGC
GTCAAAACGG ACGCGCAGTC ATTCCTCGAT CTGCTCGCCG ACCCCGAGGA CAGAAGATCC
TACGCAAACG CCTACCAAGA CGCCTGGACG ATTTCATCGC TGCGCCACTT CGGTCCAAAA
GCCATATCCT GCATGTCCCA GATCCCCCAA ACAATTTTCC ATTCGCAGCT TCCCACGAAC
AAGCCAACAA TCGTGGTTCG AAACTCAAAC GACTTCTTTC CTGATATCGA CGACTCCCAC
ACGTGGCATG TGTTTTGTAA CGCCCACAAC GCCCTCCTAA CGCGCTATTT GAACGGTCTT
CCGGACTGGG ATATGTTCCA GACGCTTCCC GAAAATGGGC TGGACTATGC ATCCTTCCAC
GCTGCAGCAC GCTGTATCTC CGGCGGGCCA ATCTACATCA CCGACAAGCC AGGCCAGCAT
GATATACCAC TCATCAAACA AATGACCGCG TCCACGATCC AGGGCACAAC AATCACGCTA
CGCCCAGACA TAGCGGCGCG TACGCTAGAC ATGTACCACG ATATCAAGGA AGGCCATATT
CTCTGCGTGG GGACATACCA CGGCCGCGCG GGATCTGGGA GCGGTATTAT AGGAGTGTTT
AACGTCAGTA ACAGAGTCGA GTCGGTGATT ATCCCGGTTG CTGATTTTCC GGGGATATAC
GATGATCAGG AAGAGACGGG GTATATTGTT CGTGCGCACA GAACAGGGAG AATTGTGGGG
GAGCTCCATT CGTCATCGGC GGTATCGGTT ACATTGAATG AAAGGAGATG GGAGGTGCTA
ACAGCGTACC CCGTCAAAAC GCTCACATTC AAAATGAACT CAAAAGATAA GGAGAACGAG
AGTAGCATGC CTACGGCAGA TGTTTCTGTC GATGTCGCGA TCCTCGGCCT TCTCCGCAAG
ATGACCGGCG TTGCAGCTCT TGTCAGCTCA GACATATATA TTGAGGACAC TGGGCGTTTG
CGTGTCGATG TTGGGATCAA AGCCCTAGGT GTATTGGGGA TATACTTCTC GTGCCTCCAA
GATTGGGATA TAGACAAGCA TTTCATGGTA CTTGTTTCGG GGAAGCCGGT ACCGAGGAAG
ACAATTTGGA AGGAGGATGG AAGGGTCCTC GCCATTGATG TCGAGGAGGC GTGGCATGGG
CTGGGACTTG AGGCAGGTTG GGGGAATGAG GTATGGATTT CAGTTCTGAT GTGA
|
|---|
| Protein sequence | MPVDLTCYPP LGKVTCLEAD KIRFTILIEP ASQGQYEFQI WHNIGLSEWA ALPLSEYPSA
ALPALSSRQD PGNRGVFAGE ISCPQARYAG RFTVRYREGS EGEWRWANKE RGCHDGELVI
VSRGLSSELA LSSAQDFANY FDGLSPDIQV EVRKSEAPGA ALWNISGPVE EARDGHSGLL
RLPLGTPSSM SRFFALARVE TSWLGPRQGK DKLNFTEDAI LLSFLRTDGV HVVLLGVTVD
DTLTVLGSGP AGEVVIKSQN DNATPSRFQV LAATAADFEV ATSALIYEAR RLVRPYENTA
QGGPRTQWLS EWYDGLAYCT WNGLGQDLSE EKILSALDDL KTAGIRIRTL IIDDNWQSLD
NEGAGSWHRA LTQFEANSKA FPNGLAKAVT TIREQHRNIE YIVVWHALFG YWGGISPEGS
LAAIYKTREV ALNSTTRPSM LTIDPSDIQR FYNDFYAFLS RSGISGVKTD AQSFLDLLAD
PEDRRSYANA YQDAWTISSL RHFGPKAISC MSQIPQTIFH SQLPTNKPTI VVRNSNDFFP
DIDDSHTWHV FCNAHNALLT RYLNGLPDWD MFQTLPENGL DYASFHAAAR CISGGPIYIT
DKPGQHDIPL IKQMTASTIQ GTTITLRPDI AARTLDMYHD IKEGHILCVG TYHGRAGSGS
GIIGVFNVSN RVESVIIPVA DFPGIYDDQE ETGYIVRAHR TGRIVGELHS SSAVSVTLNE
RRWEVLTAYP VKTLTFKMNS KDKENESSMP TADVSVDVAI LGLLRKMTGV AALVSSDIYI
EDTGRLRVDV GIKALGVLGI YFSCLQDWDI DKHFMVLVSG KPVPRKTIWK EDGRVLAIDV
EEAWHGLGLE AGWGNEVWIS VLM
|
|---|
| |