| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_06695 |
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| Symbol | |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Aspergillus nidulans FGSC A4 |
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| Kingdom | Eukaryota |
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| Replicon accession | BN001301 |
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| Strand | - |
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| Start bp | 2820169 |
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| End bp | 2825858 |
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| Gene Length | 5690 bp |
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| Protein Length | 1170 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | nonsense-mediated mRNA decay factor (Upf2), putative (AFU_orthologue; AFUA_7G05430) |
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| Protein accession | CBF71264 |
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| Protein GI | 259480279 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.656858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0987271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA GCAAGCACCT GAATAGTGGA GGTCCGGGTA TGTGGCACCG GCAGAGGAAG
ATGCTGGGGG AAGGATGGGA TGTTGGGAGC AACTCAGACG GTCTTATGGG GTTATCAACG
TTGGGGGCCA CAACGAAAGC GGCGCGAGTT GAGCAGGTTT ATAGAAGGGT TGAGTGAACC
GGAGAAATTT GTTGGCCATG GATGTGAAAA GGGAACATAG TGCCTGTAAT CTTTCAGTCC
AGCGCTTGAA TTGCAGTATA CTGCAGGGGA AAGGATGTAA GTGGCTACGG CAACGGATTA
CCACAAATGT TGCAAAGGGA ACCGAGAGCA TGTCCATGTC CATGATTGTT ACCTGTCACG
AAGCTGTCAC CTAGCTGTCA TCATCAACGC CAGCTAGACA ATACTTCATG ACATCAAAAA
AAACTTGCTG GCCGATAGCG CCGATTCTGC ACGAAGCTCA TGGGGCGGTC GCGGGGTGCG
CTTAACGGTA AGATTGATGA TGATGATAAT AGAGATCTAT GGGCTTGGAA AGCGAGCTTT
CAAGCAGATT GAGCTCTTAA CTGTTGAAAC AGTAGAGGCT TCGGTCAAGG ACAATGATAC
TTCAGTGTCT TCTTCGACTG CAGAAAACCT TCACTGTTTC TCCTCTCCAC CCTTAATGTC
AATAGGTTTC TTACTGCAAC CAAACTTGTG TAATATGCCA GGACCGAAGT CTTGTGCTCT
CGATCGTCTG GTAGCCTAAA GTGCTGATTG CGGGTGGTTT ATTGCCGTCG TTTGGATTTT
CGACGGGCTG GAGCATGGTT GAGGCTAGGA GCTGATGTCG GCGAGTGGGA CTGCATTCAG
TAATCTTCAA TAGGATTGCT AGGTTGGCTA TAGTGTTCGG TCAGAAGCAT CCAAGTCACA
GCTTTGCTTC CAAGAGGTGC CGTGGTGACT GGGATAATGT TTAGTAAAGA AAGAGTGTGA
ATAGGAGATG GAGATAAGTG ACGGAGATTG GCTAGCACGG CGATGCACTC GCCGCCTTCG
CCTTCGCCCG CAATTCTCCC CACGGCTTTT CAATCGTGCA ACATCCCTTG ACTTGACCAC
ACTACCTGTT TCAGGCAGAC CCAGAAGTGG CGCCTTTCTT GTCTTTGGAA TCTCCCCAAT
GTGGCGTTCA AGTCACTCCC ACGCTTTCCG TTCCGATTTC TTAAAACCAC TACACAATAG
CTGAATTCAT CACCGCGGGG ATTGCTACGC TACAACCGGG CGGCAAGAGG ATGGATCGGC
AGAGAAAGCG TAAGCTGGGC CCGATGCGCT CTGGATGATA TTGGTGTCTG TGTCCTAATA
GAGGTTTACT ACAGGGGAGT TACGCCTTCT GAATGAGCGA GCCTGGGCTG GCGAGAGTGG
TACTGTTCCC TAAATCCTTC CTTCCCCTCA CCCCGCGCTT CATCTAACCG TCGACATCCG
TATAGATATA TTTCCTGTCA GCAAATCGCT CGATTCGTCG CTGAAAAAGA ATACGGCTTT
CATCAAGCGC CTTCGCACTG GTATCAATGC TGCTGCCCAG CAGACGTTAC TAACTGACAT
CCGCACGTTG TCGCTTCACA AATACCTTTC GGAGATCATA TCAGCATGTT ACGAGGGGCT
TTGTAAACTC AAATCGCCTG GAGAGATTAC TGCCGGTGTT GAGATTACCA GTGCCCTGCA
TCAGCGATTT GGTCCGGCGG AGTTCACCCG ACAAATCGGG TGGTTGCTGG GACGGGGCCT
GAGCTCACCG GATAAAAGTC AGTTGAAAAC TCTTAGCCAG GAACTGCGTG AGCGCGAGGA
AAAAGAAAGA CTGTCTCGCC ACCGAGTATT GTTAAAGGTT GTGACGGAGT TGTGGCTGGT
CGGCGTGTTG AGGACTCTTG ATGACGTTGA ACGACCGGAG GATGTGGGTT CTAAGGGAAA
AGATGGCGCG GGATTAGGCA ATAAAGTGGT CGATGGAGTG TCGAGGAACA GAAATCCAGC
GGGTGACAAG GAGCCAGAAC CGTTCCCTTT GGAGGTCTTG AAGGATCTTC TCGGCCATGA
TCGCGACCAT TCCAATCTGC CGCTGGCTTT ATTGTTCGCG AAGAGCTTCA GCTGGGATGT
TCTTGGCGCG AAGGCCGCTG AAGAGGGAAG GAAAACTGTT GAGGCTGACG GAGCGACAGC
TATGCCTGCT GAAACTCAAA ATGGTGACGA GGCTACGGCC GAAGATGACA CACCGCTTGC
CCCGGAGAAG ATCCAGGTTC GTTTCAAAAG TATTCTGAAC CGATACCTGG AAGATGTTAA
GGCGCATGTC ATGCGCGATC AAAAGGCGCT CACTGCACAG AGCAGGCGCA ATGCGGAAGC
CTACGTAAAG AGTGGTGAGA TTTTCGAAGA TCGGCAGGCA AATTTTGAGA GGCAGACCAA
GTCGCTGGAG AAGTTGGTTG CGAATACGCA AGTCCTTTGC GAGATCCTGG GTGTAGAGAT
GCCTGCTTTA GCTACACAAG AAGCTTCAGA TCCGGCAGCA AGCGGCGGTA TTGGTCTCGT
CAAGACCTCG GAGTACCTCC GGGGTCAAGG AGAAGGGCCT GGAATTTGGG AGGATGAAGA
GGAGAGACGC TTCTACGAGA ATCTTGTCGA CTTAAAAGGC AAAGTCCCAG CTGTTTTGCT
GGATGACGGA AAGAAGAAGA AGACCGAGAC CGGCGAACCG ACCAAGAAGA AGGAAAGTGA
AGCTGGCCAC GAGTCCAGTG AGAAAACCGA GCCTCAGAGC CAGATTTCGG AGGAAAGGAC
TACCGAAGCT GATGATCAGT CTATGGCGAT TGCGAGCAAG ACCGTTGGAG CCCAGGTGGA
TGCGCTTTTG GCCAAGCTTC CTGAGCTGCA AACAAAAGAA CAAGTTGACC AGATGGCACT
GGATTTCTGC TTTCTCAATT CCAAAGCCTC CAGGAATAGA CTTGTGAAAG CTATCTCTGA
TATTCCGAAA GGCCGCATCG ATCTCTTGCC TCTGTACTCG CGTCTCGTCG CAACCCTTGG
ACAGTATATG CCAGACATTC CTCAGGGATT GACGACGTAT CTTGACGAAG AATTTCGCAG
TCTTCAGCGC AGAAAGTCCA AGGAGTTTCT TGGCCAGGTG CGAATGAGCA ACATCCGCTA
CCTCGCGGAA TTGACAAAAT TTGGAGTAGT TCCGGAGCAT ATCATATTCC ACTGCTTCAA
AGTTTCCCTG GATGATTTTT CGCGCATGAA CATTGAGATC ATTGGCCACC TGCTAGAGAA
TTGCGGACGA TACTTGCTTC GGAACCCGGA TACGTCCCCA CGAATGGCAT CCTTTCTGGA
GACGCTCGGA AGAAAGAAGA CAGTGCAGCA TCTGGGTCCA CAAGAACGCA TGATCATCGA
GAATGCTGTC TACTATGTCG ACCCACCCCA GCGGCCTGCC ATTCAACAAA AGGAGCGGAC
ACCCATGGAG TCTTACATTC GAAAACTCAT TTATCTGGAT ATGAACAAGC GGAACTATAC
CAAGATTCTA AAGTCAGTCC GGAAGCTCCA TTGGGAGGAA CCGGAGGTGG TTCATATCCT
GGAACGTGTT TTTAGCAAAC CGGCTAAGGT CAAATACGGC AATATCCATC TGCTTGCAAT
CCTTGTTAGT GCGCTCTACC GCTATCACCA AGGCTTCGTC ATTGGTATTG TGGACAATAT
TCTGGAGTAT ATCACACTGG GTCTTGAGCA GAATGATTTC AAGTTCAATC AGAAGCGGAT
TGCAGAGGTC AAGTACCTGG GAGAGCTGTA TAACTATAAA ATGATTGACT CTCCTGTAAT
ATTCGATACG TTGTATCGGA TTGTCACATA TGGCCACGGT GCGTTTTTCG GAATCATTGA
GGTTGCCTTA CTAACTGTTC TGCAGAAGGC GGCACTCCGA TGCCAGGAAA AATTAATGTG
CTTGATATGC CCGACGATTT CTTCCGGATA CGATTAGTCT GCCAGCTTCT GGATACCTGC
GGTCATTGTT TCGACCGAGG ATCTGCGAAG AAGAAGCTTG ACTTCTTCTT GAAGTTCTTT
CAAGTAAGCT TGCTTATGCT TGATGAGTGA AGCTTAGGCT AATTGTTTAG TACTACATTT
GTACCAAAGA CCCACTGCCG ATGGACATCG ACTTCCTTGT CCAAGACACG TACTCTCTCA
CCCGCCCGCA ATGGACCCTA GTTACGGAAC TAGACGAAGC TAGCCGTATC TTCGGCGAGG
CTGTTGCCCA GAATTTCAAG CCACAAGAGG AGAAGCCTGA ACCCGAGGAA GAATCGGAGG
ATAGTGGATC AGATGAGGAT CTGGAAGAAG ACGCATTTCC AGAGGCCGAC GAGGAAGGAG
AGTCGAGTGA TGAGGCCGAT GTAAGTGAAC CAGCATACTC TGCTGATCAA TGCTAACAAG
GCAGGTCTCT CCAAACGCTG AGCGCAACGA CGACAGCGAG TCTGAGGAAG AACAAATATT
CGTCACCCGT CAAGAAGAGG AACGAGACCC CGAGGCCGAA GCCGAGTTTG ATCGTGAATT
CGAGAAAATG ATGGCGGAAA GCGTTGAGTC CAGAAAATTC GAGCGCAAGG CTGTGTTTGA
TATTCCTTTA CCGATGAGAC GCGCTGCCCG TGATCCCACT GCGGAAGTCA CAGCCGCGAA
TTCAACCCCA GCTCCCGTTT CCTCGCCTGC TCAGTCGTCC GGTACAATGG CGTTCTCTTT
GATGACCAAG AAAGGCAATA AGCAGCAGAC TCGTACTATC GATTTGCCAT CCGACTCCAC
TTTTGCCGTT GCCATGAGAA GCCAGCAGCA GGCCGATAGG GAGGAGCAGC AGCGGATCAA
GAACCTGGTA TTGAACTATG AAATGTCCAA CGAGACGGAC AGTACCGAAG GTGGGTTTAC
TTCGCCTTAT CGCATGAATT CCAAGGAGCA GGGGGAAAAG CGACATGCTG ACAAAAGAAT
AAAACAGAAC CCGTTGAGAA ACGCTCCCCT GCCAGGGTAG ACAAGTCGGG CACGAACCGC
TCGGCTTTCC GCTCGCGCAA GCTGCAGCTC AGTGACGTGA ATTGGTAGTG TTTGGCATGG
TTATCCGGAA GCCACCTCAA TAGGCATTAT GACCTGCTGG GACTGGATTC CCAACGAGAC
ATGGTGTTGA TAGCCTGATA CCTTAAAATG GTGAGTGGGT TTGACCGTGA ACATTGAACC
CAAACAACCG ACTGGTCAAT CCACTTGTGT GCATGCGAAA GAAGAACGGC TTACAAGACG
GGAAAGGAAA GATCCTCGTC GCAAGCTTAT CCACCAGCTC GGACGTCACC CATTAGAGGA
AGTAGACGAT GGTTACACTC GACCTGGTCT TGGCCTCCGC TCTTCGGCCG TGTGGACGCG
GAAAATGTGA CTCAACTTCG CAGAGAGACA GCGCTTTGGC TGTATGCTTT CCATGTGCCC
AGCTTAGTTC AGCCCGCTGT TCATCCTAGC CTGGCCTTTT CCAGTCAGGC GCTATATTTA
GTCAAGTCAG GATCAATCGC TTATGGCCAA GCGCGGATAA TCCTTTATCT ATGTGCTTTG
CCAGGACCTG AACGGAACAT AGCGGACAAC AGCTTGGTGC ATTACACCAT GCAGTGGATT
ATGCTCCTAG CAAAGTACGA GTTATGTGCC TACACGCGAA ACCGAATCAT GATCAAGACC
AACATTTACA TTAGATGATA ATTGACTTCA ATCTTACTGA TCTGCCTTTC
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| Protein sequence | MTKSKHLNSG GPVQRLNCSI LQGKGSEFIT AGIATLQPGG KRMDRQRKHI FPVSKSLDSS
LKKNTAFIKR LRTGINAAAQ QTLLTDIRTL SLHKYLSEII SACYEGLCKL KSPGEITAGV
EITSALHQRF GPAEFTRQIG WLLGRGLSSP DKSQLKTLSQ ELREREEKER LSRHRVLLKV
VTELWLVGVL RTLDDVERPE DVGSKGKDGA GLGNKVVDGV SRNRNPAGDK EPEPFPLEVL
KDLLGHDRDH SNLPLALLFA KSFSWDVLGA KAAEEGRKTV EADGATAMPA ETQNGDEATA
EDDTPLAPEK IQVRFKSILN RYLEDVKAHV MRDQKALTAQ SRRNAEAYVK SGEIFEDRQA
NFERQTKSLE KLVANTQVLC EILGVEMPAL ATQEASDPAA SGGIGLVKTS EYLRGQGEGP
GIWEDEEERR FYENLVDLKG KVPAVLLDDG KKKKTETGEP TKKKESEAGH ESSEKTEPQS
QISEERTTEA DDQSMAIASK TVGAQVDALL AKLPELQTKE QVDQMALDFC FLNSKASRNR
LVKAISDIPK GRIDLLPLYS RLVATLGQYM PDIPQGLTTY LDEEFRSLQR RKSKEFLGQV
RMSNIRYLAE LTKFGVVPEH IIFHCFKVSL DDFSRMNIEI IGHLLENCGR YLLRNPDTSP
RMASFLETLG RKKTVQHLGP QERMIIENAV YYVDPPQRPA IQQKERTPME SYIRKLIYLD
MNKRNYTKIL KSVRKLHWEE PEVVHILERV FSKPAKVKYG NIHLLAILVS ALYRYHQGFV
IGIVDNILEY ITLGLEQNDF KFNQKRIAEV KYLGELYNYK MIDSPVIFDT LYRIVTYGHE
GGTPMPGKIN VLDMPDDFFR IRLVCQLLDT CGHCFDRGSA KKKLDFFLKF FQYYICTKDP
LPMDIDFLVQ DTYSLTRPQW TLVTELDEAS RIFGEAVAQN FKPQEEKPEP EEESEDSGSD
EDLEEDAFPE ADEEGESSDE ADVSPNAERN DDSESEEEQI FVTRQEEERD PEAEAEFDRE
FEKMMAESVE SRKFERKAVF DIPLPMRRAA RDPTAEVTAA NSTPAPVSSP AQSSGTMAFS
LMTKKGNKQQ TRTIDLPSDS TFAVAMRSQQ QADREEQQRI KNLVLNYEMS NETDSTEEPV
EKRSPARVDK SGTNRSAFRS RKLQLSDVNW
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