Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ANIA_06615 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Aspergillus nidulans FGSC A4 |
Kingdom | Eukaryota |
Replicon accession | BN001301 |
Strand | + |
Start bp | 2576455 |
End bp | 2582422 |
Gene Length | 5968 bp |
Protein Length | 1947 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | COPII coat assembly protein sec16 (Protein transport protein sec16) [Source:UniProtKB/Swiss-Prot;Acc:Q5AYL5] |
Protein accession | CBF71102 |
Protein GI | 259480194 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.874293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.333333 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGAACA GCAATAGCGA GGCATCAGCC GTGTGGAATC CGGCACTGCG AACGGACGAT AATCACGAGA CGGCCGCGAC GGTAGAAGAA ATATCTGCTC CGGTGTCCAG TGATGTGGCG CCGTTAACTC CTAAAGCCAC AACCGCAAAT ACAGATATTG TACCTGACGC GATCGATTCG ATAAACACCG AATCTCCTGC ACGTGAAGAG ACAGCTGAGC TGCCACTCAA CGAACATACA CACACAGTTC CTGGCGCGGC TGAGCCGGTA AATGTTGGAT CTGCCGGTTT TATAGAAACT GCCGAGGCGC CACCAACGGC AATCGATGAT CCAGGCGCAG TTCCGGTCGC GGTCTCACCA AATGGCGAGA CCTCGGCGCC TGCAATCGCC ACAGACGTGA CATCGGTTTC CGAAAATACA GTCCCGGACG TCACTGAATC GTCGAGTGTT GAACCCACCG CACTTATAGA AATTGCGCAG GCAGAATCGG CGACCGGCGA AGACTTTAAC CAGGCGGAGA CACGGGAGGA GTTCCGCGAG GAGGCCGCGG AGTTGTTCTC CGCGGCTGCT GATGAGAACC AGGAGACTGA TGCTTTCAAA CCCCAGGCCG AGCTTGCAGC CGCGCCTGGG GATGGATATA ACAACTTGCA GTCGATGCAA GAAGAGCATG TACAGGAAGG GCAGACACAC CAGCTTGAAA TTGACACATC GGTAAACGCT GCGCAAGGAT CAAGTGATTA TCCTACTCCG GGCTGGGTCT ATCAACAAGG CATAGCTGAC CATGCTACAC CGATTGACGG GGAATTAAGA AGCACAAACC ACGATCTCTG GGGGAGCCCT AAGAGCGTTG ACAATGGCGA AGATCGCTTT TTCGACCAGC TGAGGACACA AACGAAGCCG ATCTATTTCC CATCGGAGGA GTCAAGATTT GAAGAGGGTG TGCCTTTATT GGATGGCTCT GCGGAGGCCC CGGTCGAGGC AGCGCCAGTC GAGGCAACGC CAGTAGAGCA GGCGGTGCCT CAACCGGGTC AACTCGACCG TGTTTTTGAA GGAGATGAGG ATGAGGATGA TGGATTTTTC AGCTCGGCTC AGCAGCCAGC CACAGAAAAC GAACCCCAAG AGCCCGTCCA TATACAGCGA AAAAGCACCT CGCAAGTGCT AGATTCCCTT AACACGAACC GGGATGGGGT TCATAGTCCG CTTTCTCCTA CTGCCGAGGA GTTCAACGAT ATCATAGCGG CAGCGGCCTC AAAGTCGCCC GAGAACGTCC AGGAGCCTGC TTCGGAGGAA GACCTAGCTG CGCGGTGGCA GGCTGAACTT TCTGATGATG ATTTGGAAGT TGCTCCTGTG GAGGAAGATC TCGCCGCTAA GTGGCAGGCG GAACTGGATG ACGATGATCT ACTCTTAGAA GACGAACCCA GCGATCTCGC TCAAAATACC GCTGCTGAGG TGGTCAACGG GCACGGCGTG GAACCCAACC TCCAGGCTCT CGGCAGTCCA TTCGGAACGC CACAAAACCC CAGCAAACCC AAACCAGCGC AGAGTGTATA TACTCCTCAC CAGCCCTCTA CAGCGGATCT TGTCCAGAGC GTTCCAATTC CAGGGGCAAC GCCTCTATCC AGTAGTGCTC CTTACAGCAC GAGCTATTTC CAGCCGCGGC CCGAGCCTCC AGCTCCTGCA GTTAGGGCTG AAAGCTTCGC AGAGCGACCT AAAGAAGGTT ACAAGTCTCC TTATGATCTT CCGGAAGACC TTGCCCCACG TCGCAAACCT GCCACCAAAC CAGTAGTATC CTCAGCTGCT AATGTGCCTG CACCGCCTCC ACGAAGTAGT AGCTTTACGG CGCCTCCACC TCCTCAGTCT TCTTCTGGAG TACCAGTCCC GCCTATCAAT GCTGCGACCT TGCCTCCAGC ATCGAAACCA AATGCTCCGG TTGCAAGCGC GCCAAAGAAC TTCTACGAGG AGTTGCCGCT CCCCCCCGTA CGACCACGTT CGCGGCCTGC AGAATCAGGG CGGTATACGC CCAAATTTAA CACGGCAAGC CCTGCATTTG TGCAGCCGCC CCCGGCAGCG CATCCTGTCA CTAATCCTTA TGCTCAACTG TCTGGCGACA CTCCTCAATC TCAATTGCAG CAGCCGGAAA AATTGGGGCC GTATGCAAAC AATGTGGGCT CCAGTAGCCA AAGCGCTCCT GCAGTACCTC CTATCAACTC AAGATACTCC CCGAAGCCAC CAACATTGCA ACCAGGAGTT AAACCGCCCG CTTCGCCTAG GTATTCTCCA GCGCCGCCGC CGCCAGCAGC TGCGTCTGCG CCTTTGCAAC GTTATACCTC ACAGCCGTCT GTCATTCCGG GCCAAACAGT TACCTTACCT TTCCAGCCGC GAACTTCAAG TCCGCTAGCC CACCACGAGA AGGTTTCCTA TCAACCAAAC GAGGCTTCGC GGAAACCATC TTTTCCACAG CCTACTTCAC CTGTTACTGG ACAACCATCA CACACTGAGA CAGCCGCCCC GATGTCACCT CGTTCTTCCC AAGTACAGGC CTCTGGCCCG AGTGCTGTAG ATACATCAAG CAGCTACCAG CAGACCTCCC CACCAAGGAA TCCCTATGCG CCGCCTTCAT ATCTAGAAGA GTTTTCCCGC CGCGTTTCGC ATGTTAACAA TAGTACGCCC TCCGCCTATA CTCCACCTCC CGAGACACCG CCATTTGTTC CTCCTCGAAG ATCGCAGACA CAATCTCCGA CCCAGCAACA GTCAGGCCCT AGACTATCCG TACCGTCTGT CGATCCACTC AAACGGCCTG CATCTGTTCA CGCGCCCAGT TCGCCAACGA AGACCTCCCA TACTTACGCG CCAATGCAAC CCTCCAGTCA TATTCGCACC ATCTCGCAGT CACTTGAATT CATTCCTCCA AGCGACGGAC AAGAGCTTGA CCCTCTTCAA AGATGGAAAG GAGCGCCGAT TTTCAAATTC GGTTTTGGTG GTACGGTCCT CTCTTCATTC CCGAAACACG TCCCTCGTTA TAGCGCAGGG CAAACCGCGC CAAAAATTAA GCCTATGCCT GGAGACGTTA AAACAACTCA ACTCAAGGAT GTGATCTCAT TTCCAGAAAC TATCGTACGG CATCCAGGTC CTCTGAGGAA TAAGTCCAAG AAGAAAGACT TAGTTGCTTG GCTTTCTAGC AGAATCGCAG CATTTGAGAA CGAGGGTGTC CCGCAGAACC TCCAGGCCTA CCCGGACTCT TACAAGCGCC GCGATGAGAA GATCCTGCTG TGGAAAGCTG TACGCGTTTT GGTTGAGCAT GACGGCGGCA TGCAGAGCAC CCCTGACCTC CAGGAGGCTC TAAGGGGCAT TCTATTCCCG CATCTGCAAA CCAATGGGCT GGAACCTATG TATAGCGACT CCCTCCAGTC TTTTGGCGCC GAAGTCATTA ATGCTTCTTC TCTGTCTGAT TCTGCGGAGT CGAAGCCATT GAGTAGTATC CGCAATAACT TGCTTATTGG CGAACGGGAG AAAGCCGTTT GGAGTGCAGC GGATAACCGT CTCTGGGGTC ATGCTATGAT CATCGCGTCA ACGCTAGACA AGTCCATTTG GAAACAAGTC GTGCAGGAGT TTGTGAGGCG TGAGGTTAGG TCTAACAGCG GAAATCCCGA GTCGCTTGCA GCTTTGTATG AAATCTTCGC TGGCAACTTT GAAGAAAGTG TCGATGAACT TGTTCCTCCC TCCGCAAGGG CTGGATTGCA AATGGTTAGC AAGGTCGATG GGCATGGTCC CTCTAAGGAC GCTCTTGCTG GCCTGGAGTC TTGGAAGGAT ACACTAGGTT TGGTTTTGAG TAACCGAAGC CCTGAAGACC ACCGAGCGCT CCTGGCTCTC GGTCGATTAC TACTGTCTTA CGGTCGGATA GAGGCAGCTC ATATTTGCCT TATTTTCTCG CGGGCAGCGG TGTTTGGAGG CCCTGATGAT CCTCAAGCAA GCATTGTTCT TCTCGGCGTA GACCATGTCC ACTCCTCGCC TACGGCCTTG CTGGACGATG ATGCAATCCT ACTTACCGAG GCATACGAGT ATGCTACGTC TGTTCTAGGG GCATCACCGA CGTCTACACT ACCTCATCTC CTGGCCCTGA AACTTGTTCA TGCATGGTCC CTTACAGATC AAGGGCGCAA GTCCGAAGCC CAGCAATACT GTGATGCCAT CACAGCAGCT CTCAAAGCTA CCACGAAGCA ATCTGGATAT CATCATCAGC ATTTGTTTTT CGGGGTCGAT GAGTTATCAG CGCGGCTTAA GCAGACTACA GGCGATGGAG GGTCGTGGAT TTCGAAACCA AGCATGGAGA AAGTCTCTTC CTCAATGTGG AACAAATTCA GCAACTTCGT TGCCGGGGAT GACAGCGACG CTGCATCAAC TGGCTCGGGC AAGGGTGGAG AAACAGGATT TGGTCCGTTT GCTCAGATCT CTGGTACCCC TACTGTCAGC CGCTCGCCAT CTGTGACAGA CTTGTATGGC CAATACCCTA TGCCTGTCGC ACAGCAAGTT CCGGGTGCCG GAACGTCTCG TTATCAGCCC AATAACCAGA ACGCTCCGAA CTCGTCGCCT GATCAGGGTC GTGGACGATC GTCTCTAGAC TCACAGAGGT CTGCTTCATT TGGACTCTCC TACGGCCAGC GTCGTGGATC GCAAGAGTAT GGGCATCCAT CAGAGAGTCC TATGTATGGA GGGGGTCCTT TCTACGGCTC CCCAACTGCG GGTTACCAGT CCACGCCGCC TCAGACCTCG TACATGCCTC TAGCGCCCGT GGAGGAAGAT ATGGCTCAAC AAGCTTATAC GCCACCGACA GCTACTCCGC AAGGACTTTT CGGTCACGAC TTGCCTTATC AACCTCCTGC CCAAAACCCA TTCGATCAAT CAACTGGCCC TGAAGCACCT GCTTCTCAGC ATACCGAAGC TGACGGGTAT ATGCCTCCGA CGGGCAATAC TGGCTATGAA CCTCCTGCAA GTAATACCCT AGAAGTGGAA GTGACAGAGG AGTCTGAGGA TGAGAAGCCA CGTAAGAAGT TGACAATGGA TGATGAGGAC GACGACGACA TTGCTGCTCG TGCTGAGGCT TTGAAGAAAG CTGAAAAGGC ACGTAAGGAT CGGGAAGCTG ATGAGGCTTT CCGGAAAGCA GCAGAAGCTG ATGGTAAGCT TTGTGTTCTT TCCGTGTAAA TGCATGTGGC TAACTATGTT GAAGCTAAAA AACCTGCTCC GGCAAAGAGC TCGTGGTGGG GATGGATCAA GGGAGGAAAT AAAGAGGAAG CTAATTCAGG AAAACCAATT CGCGCGAAGC TTGGTGAGGA AAGTTCTTTC TACTACGATA AAGAACTGAA GAAATGGGTC AACAAGAAAG ACCCCAACAG CGCTACCCCG GCTCGTGCTA CTCCACCCCC ACCGAAAGCC ATGGGCCCTC CTAGCAGAGC CGCCAGTGGG AGCAGCATGC CACCGTCTGG AACAGCAGGT CTCGGTAGTC GGCCACCGTC TGTTGCGCCG CCGCCGTCTG GCAGCCCGGC TCCATCTTCT CTTGGCCTTC CACCAACACC TGGTTTAGGC CCTGCGCGAT CTGCCTCTAC CGGCGCCGTG CCGCCCGCTG GTAACGCTTC ATCCCGCCCG GGAAGCTCTG CTGGGCCTCC TCCCAGGCCT TCTACGTCCT TGAGCCATGC TAGCTCAATT GACGACTTAC TTGGAGCACC ACAGGCACGC AAGGGCGCCA CTTCTCGAGG CAGGAAGAAG GGCCGGTATG TTGATGTAAT GGCCCAATAA GAGTCTTCAG ATGAAGCTCT TAACATCGCT TCCAACTCTG CCTTATAGTA TCCGGGATCT TCCCCATCTT GCATATCGAA GTGTATACCC TTGCATTGCG AACTATCAGC CACCTTACAT TGTTGTGAAC TTGCATGCCA TATCGTCCGG AAGTATGGCC TGGCTTCTTG TTCTCTGA
|
Protein sequence | MENSNSEASA VWNPALRTDD NHETAATVEE ISAPVSSDVA PLTPKATTAN TDIVPDAIDS INTESPAREE TAELPLNEHT HTVPGAAEPV NVGSAGFIET AEAPPTAIDD PGAVPVAVSP NGETSAPAIA TDVTSVSENT VPDVTESSSV EPTALIEIAQ AESATGEDFN QAETREEFRE EAAELFSAAA DENQETDAFK PQAELAAAPG DGYNNLQSMQ EEHVQEGQTH QLEIDTSVNA AQGSSDYPTP GWVYQQGIAD HATPIDGELR STNHDLWGSP KSVDNGEDRF FDQLRTQTKP IYFPSEESRF EEGVPLLDGS AEAPVEAAPV EATPVEQAVP QPGQLDRVFE GDEDEDDGFF SSAQQPATEN EPQEPVHIQR KSTSQVLDSL NTNRDGVHSP LSPTAEEFND IIAAAASKSP ENVQEPASEE DLAARWQAEL SDDDLEVAPV EEDLAAKWQA ELDDDDLLLE DEPSDLAQNT AAEVVNGHGV EPNLQALGSP FGTPQNPSKP KPAQSVYTPH QPSTADLVQS VPIPGATPLS SSAPYSTSYF QPRPEPPAPA VRAESFAERP KEGYKSPYDL PEDLAPRRKP ATKPVVSSAA NVPAPPPRSS SFTAPPPPQS SSGVPVPPIN AATLPPASKP NAPVASAPKN FYEELPLPPV RPRSRPAESG RYTPKFNTAS PAFVQPPPAA HPVTNPYAQL SGDTPQSQLQ QPEKLGPYAN NVGSSSQSAP AVPPINSRYS PKPPTLQPGV KPPASPRYSP APPPPAAASA PLQRYTSQPS VIPGQTVTLP FQPRTSSPLA HHEKVSYQPN EASRKPSFPQ PTSPVTGQPS HTETAAPMSP RSSQVQASGP SAVDTSSSYQ QTSPPRNPYA PPSYLEEFSR RVSHVNNSTP SAYTPPPETP PFVPPRRSQT QSPTQQQSGP RLSVPSVDPL KRPASVHAPS SPTKTSHTYA PMQPSSHIRT ISQSLEFIPP SDGQELDPLQ RWKGAPIFKF GFGGTVLSSF PKHVPRYSAG QTAPKIKPMP GDVKTTQLKD VISFPETIVR HPGPLRNKSK KKDLVAWLSS RIAAFENEGV PQNLQAYPDS YKRRDEKILL WKAVRVLVEH DGGMQSTPDL QEALRGILFP HLQTNGLEPM YSDSLQSFGA EVINASSLSD SAESKPLSSI RNNLLIGERE KAVWSAADNR LWGHAMIIAS TLDKSIWKQV VQEFVRREVR SNSGNPESLA ALYEIFAGNF EESVDELVPP SARAGLQMVS KVDGHGPSKD ALAGLESWKD TLGLVLSNRS PEDHRALLAL GRLLLSYGRI EAAHICLIFS RAAVFGGPDD PQASIVLLGV DHVHSSPTAL LDDDAILLTE AYEYATSVLG ASPTSTLPHL LALKLVHAWS LTDQGRKSEA QQYCDAITAA LKATTKQSGY HHQHLFFGVD ELSARLKQTT GDGGSWISKP SMEKVSSSMW NKFSNFVAGD DSDAASTGSG KGGETGFGPF AQISGTPTVS RSPSVTDLYG QYPMPVAQQV PGAGTSRYQP NNQNAPNSSP DQGRGRSSLD SQRSASFGLS YGQRRGSQEY GHPSESPMYG GGPFYGSPTA GYQSTPPQTS YMPLAPVEED MAQQAYTPPT ATPQGLFGHD LPYQPPAQNP FDQSTGPEAP ASQHTEADGY MPPTGNTGYE PPASNTLEVE VTEESEDEKP RKKLTMDDED DDDIAARAEA LKKAEKARKD READEAFRKA AEADAKKPAP AKSSWWGWIK GGNKEEANSG KPIRAKLGEE SSFYYDKELK KWVNKKDPNS ATPARATPPP PKAMGPPSRA ASGSSMPPSG TAGLGSRPPS VAPPPSGSPA PSSLGLPPTP GLGPARSAST GAVPPAGNAS SRPGSSAGPP PRPSTSLSHA SSIDDLLGAP QARKGATSRG RKKGRIRDLP HLAYRSVYPC IANYQPPYIV VNLHAISSGS MAWLLVL
|
| |