Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ANIA_06609 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aspergillus nidulans FGSC A4 |
Kingdom | Eukaryota |
Replicon accession | BN001301 |
Strand | - |
Start bp | 2559070 |
End bp | 2560932 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | RING finger protein (AFU_orthologue; AFUA_6G04230) |
Protein accession | CBF71090 |
Protein GI | 259480188 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0223135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTCGG ATGCTCTTCC AGAAGACGAG AGATCAGAGG AGCTCTCGTC CATTGCCGCC ATCTTCCCAG AAATCAAGAT TGACCCTTCG TCTCCGTACC GGGCGTCACT AGATATACCA GTGAAACCAG CGACGCCTCT GAACGTCTGC TTCTATCAGC GCCCGGAAGT CGGCTTTCCT TCGGTGCTTA CTCCTCCAAC CTCCCTCGAT GCCAGCGAAG TCGGCCTCGG CTCCAAAGCC AAGTTAGATG ACCAGTCCAT GGCGGATACG GAAAAAGATG TGCATGTCCT CGCACACCTA CCACCTCTTA ATCTTGAGAT TGAGCTTCCG GAAGGCTATC CTTCGATCAA ACCTCCCATA TTTAAGCTCA ACACCAATCC ACGTTGGTTA CCCTTATGGG CCGTTTCGAA ATTACTGGAC GATGGCAAGC GTCTCTGGGA AGAATTTGGC CGGTCTCTCG TGGTATTCAG CTACATAGAT CATCTGCAAC AGCTGGCAGA AACAGCATTC GGAATCGACG AAGCTTCAGG CGGCGAAGTA CGGCTTTCGC GGGAGCTAAA GATTGCTTTA CTAGACTTCA ATAGCAAAGC AGAGCGCGAG AAGTTTGAGC AGGAGACCTT TGAATGTGGG ATCTGTCTTG AGCCCAAGAA AGGTGTTAAC TGCCATCGTC TCTTACTGTG CTCCCATGTC TTTTGCATAC CTTGCCTGCA AGACTTTTAT AACACTTGTA TCACAGAGGG AGATGTTGAG GGCGTCAAGT GCCTGGCGCC TGATTGTGGT CAAGAACAAA ATCCACCAGC GGCCGGCCAG GGTAATATTC GCAAAAAGCG AGATCGGACA CTTAGCCCGT CGGAGCTACT GCAGATACCT CTTGAACAAG AAACTGTGCA ACGTTATGTC TTCATGAAAA GGAAGAGGAA GCTGGAAGCT GACAAGACAA CTATATATTG TCCTCGGCAA TGGTGTCAAG GTGCAGCGCG GTCAAAAAAG CACCCTAAAC CTATTGATCC TATGGCAGAC GATTTGGAGG ATTCTGGGGA TGAGTCAGAA GGCCTAATCT TTGACCCCCT TGGGGAGGAG AGCCAACTGC CCCCGATGGC GGATCGCTTG GCCATTTGCG AGGACTGCAA CTACGCCTTC TGCTGCGTTT GTAAGAAAGG CTGGCACGGA GAACTATTAC GGTGCTTCCC TCGGCGACAG GCGGAGCTGA CCGCAGAGGA GAAGGCGACA GAGGACTATC TCAGATTATA CACATCCGCT TGTCCAACCT GCGATGCTCC CTGCCAGAAA CGCATGGGCT GCAATCACAT GAAATGCTTC AAATGCGAAA CACACTTTTG CTATCTCTGC TCCGCCTGGC TTGAGGAGGG AAATCCTTAT CGACACTTCA ATGATCTCGC CAGTCCATGC TTTAACAGAC TCTGGGACCT AGAAGGCGGC GACGGCATTG ACCCAGAAGG TGCTGAAGCT TTGCATCAAG TCCCCGAACA GATGATCTTC GACGACGGTA GTGACGACGA TGAAGAACCA CAACAATGGG TGATGGATCG TGAGGCTAAC GAGCCGAGGA ACGGACGACA GCCTCCACCA CCAGCCCCAG TTCCTCCACG TGTCAACCAA GTTGGTGGAA ACCGCGCTCT AGGACGCAAT GCCAACGGTC TTGATGCAGC AGGTCGAGCA GCCGCAGCTG AGCGGCAAGC TCAGGCCCGA GCCATGGCGG AAATCCGAGC CGGTCGTGTC CCTGAGCGCG CTGGGCATGA ACAACCCCCC GTCCCACATG CTGGTCTCCA GCGATTCCTC GAACTTGTTC AGAACGACCG CGAAGATGAA TGGGATAGTG ACGAGCTCGA AGACGGTTTT TAA
|
Protein sequence | MDSDALPEDE RSEELSSIAA IFPEIKIDPS SPYRASLDIP VKPATPLNVC FYQRPEVGFP SVLTPPTSLD ASEVGLGSKA KLDDQSMADT EKDVHVLAHL PPLNLEIELP EGYPSIKPPI FKLNTNPRWL PLWAVSKLLD DGKRLWEEFG RSLVVFSYID HLQQLAETAF GIDEASGGEV RLSRELKIAL LDFNSKAERE KFEQETFECG ICLEPKKGVN CHRLLLCSHV FCIPCLQDFY NTCITEGDVE GVKCLAPDCG QEQNPPAAGQ GNIRKKRDRT LSPSELLQIP LEQETVQRYV FMKRKRKLEA DKTTIYCPRQ WCQGAARSKK HPKPIDPMAD DLEDSGDESE GLIFDPLGEE SQLPPMADRL AICEDCNYAF CCVCKKGWHG ELLRCFPRRQ AELTAEEKAT EDYLRLYTSA CPTCDAPCQK RMGCNHMKCF KCETHFCYLC SAWLEEGNPY RHFNDLASPC FNRLWDLEGG DGIDPEGAEA LHQVPEQMIF DDGSDDDEEP QQWVMDREAN EPRNGRQPPP PAPVPPRVNQ VGGNRALGRN ANGLDAAGRA AAAERQAQAR AMAEIRAGRV PERAGHEQPP VPHAGLQRFL ELVQNDREDE WDSDELEDGF
|
| |