| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_06085 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001301 |
|---|
| Strand | + |
|---|
| Start bp | 1305060 |
|---|
| End bp | 1307603 |
|---|
| Gene Length | 2544 bp |
|---|
| Protein Length | 824 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | ATP-dependent RNA helicase (Hrh1), putative (AFU_orthologue; AFUA_2G09230) |
|---|
| Protein accession | CBF70215 |
|---|
| Protein GI | 259479728 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.44535 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.257156 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAC GGGTTCGCAC CGTCTTCGTT GACGAAGACG CGGCACCTAT CGTCGAACAA
GGAAAGCCAC TGAAATCGAA CAAAAAGCCG AGTCCAGAGA CTGGAGAGAG GCCAAGTGAT
AACAAGGAAA ATGTCTCCAA AAAGAACAAG AAACGGAAGC GCGATCAGCT CGCGGACGAA
ACTCGCCTGC ACCGAACGAA GAAGTCGAAC ACCTCCGAGT CGCAAGCGGC TGCTGTTGAA
CAAAATGAGA ATAGAAAAGA AGACGAGGCA GTAAATAACT CTGGAGAAGC AACTATCGCC
AAATCGCTCC CGAAAGACCA ACCCGAGAAT CAAAAGCACA AGCGGAAGAA GCATAGCCGA
CCTTTCAAAG ACGAAGAGAA CGGAAGAACC GCCTCGCTCA AGAAGAAAGC GCAAATGCTC
TATGAGATTC GCAAAAACCT GCCTATTTTC GCGCACGGCG ACGAAATCCG ACAACACCTC
CGCAAGAACG ACGTCATGCT TTTGATCGGT GAGACCGGTA GCGGAAAAAG TACGCAGATT
CCACAGTTTC TTGTTGACGA GTCGTGGTGC CGGCCGACAA AGACTACAAT CGTTCAGGAA
AACGGGTCTA AAAAGGAAGC GGTTGTTGGT GGATGCATTG CTATCACGCA GCCTCGACGT
GTTGCTGCGA TCTCGCTCGC GCGGCGTGTG GCGGAGGAAA TGGGGACCCC GTTGGGATCC
TCGTCGCCGG CGAGTAAAGT TGGTTACTCG GTGCGGTTTG ATACATCCGT ATCACCGAGC
ACAAGGGTGA AATTTTTGAC TGAGGGGATG CTGCTGCAGG AGATGCTGCA TGATCCGTGG
TTGACGAAGT ACAGCGCCAT TGTTGTTGAT GAGGTCCACG AGCGGGGAGT CAATGTTGAC
CTTGTCATGG GGTTCTTGAG GAACCTTGTT TCTGGAAAGA GGGAGGGAAG GGGAGGTGTG
CCGCTCAAGG CTGTGGTTAT GAGTGCTACG GCTGATATGG AGAGTCTACA AGAATTTTTT
GTGGAGGGAT ACAAAGCTCG GGAATTGCAG AAGGAAGAGA AGTCAGAGAA AGATGGTATC
GCAGTGTGTC ATATCAAGGG CCGTCAGTTT CCGGTCAAGA CGATATATTC GCCGGAACCC
GTGCATGACT TTGTTGATGC TGCCCTAAAG GTCATTTTCC AGATCCACTA TAAAGAACCG
ATTCCAGGCG ACATTCTGGT CTTCCTCACG GGACAGGAGA CGGTTGAAGC GTTGGAAAAT
CTGGTCAACG AGTATGCCAC AGGGATGGAC CCTTCATTAC CGAAGATACA AGTTCTCCCA
CTTTTTGCAG CGCTTCCCCA AGCAGCTCAG CAGCGAGTCT TTGTCCCTGC GCCGCCACGC
ACCCGCAAGA TCATTTTGGC TACGAATATT GCTGAAACTT CTGTGACTGT ATCTGGTGTG
CGCTATGTCG TGGATTGTGG AAAGGCAAAG ATCAAGCAGT TCCGGACCCG GCTTGGATTG
GACTCGCTGC TTGTTAAGCC TATCTCGAAA TCCGCTGCTA TCCAGCGCAA GGGTCGTGCT
GGAAGAGAAG CGCCTGGCCA GTGCTACCGA CTATATACAG AAAAAGACTA CCTGGCACTA
GATGAGGTCA ATACGCCGGA GATTCTACGG TGTGACCTCA GCCAGGCGAT ACTCAACATG
AAGGCTCGAG GGGTCGACAA TGTCATTGAG TTCCCATTCC TGACACGGCC TCCACGAGAA
GCTCTAGAGA AGGCGCTCCT CCAATTACTG AGTATCGAGG CCCTCGATGA AACCGGCAAG
ATCAGTGAGA CCGGGTCGCA CATCGCCAAA CTTCCGCTCA CCCCGACGTT AGGCCGGGTG
TTACTTGCCG CGTCCGACTT TGGACCGGAT TGTCTGACTG ACGTTATTGA TATTATATCG
TGTCTGAGTG TGGAGAACAT ATTTCTAAAC ACCACGTCAG AAGAGAAGAA AGAAGCGGCC
GAGGCAGCTC GCCGCGATCT ATACAGACGA GAAGGCGACC ATCTTACGAT GCTAGCGACA
GTACGGGCCT ACGCATCGGA GAACACTGAC CGGAAGGCAT GGGCTGAGCG ACATCTGGTC
TCGCATCGGG CGATGCAGTC CGTCATGGTA AGTTTGCTGC CCTACCTAGA TACCATGTCT
CTAAGCAACC CTCACGGCTA ATATTCGGGT CCTTAGGACG TCCGCAAGCA ACTGACGGCT
CAATGCCGAC AGGCCAAACT GCTTCCGAGT CCCACCGAGT CACGGGACTC AGACTCCTCG
TCCATCCGAG AACCGTCTCC TGTGTTCATA TTGAAGAGCT TCCTGCGAGG GTTCGCTACA
AACACCGCTC GCCTTGTCCC CGACGGTAGC TACCGCACGG TGGTGGGGAA CCAGACAGTG
GCAATCCACC CATCTAGTGT TCTCTTCGGG AAGAAGGTCG AGGCGATCCT GTACAACGAA
TTTGTGTTTA CCAACCGCAG CTACGCGCGA GGGGTGAGTG CGGTGCAGAT GGATTGGGTG
GGAGAGGCTC TGGCGGGAGA GTGA
|
|---|
| Protein sequence | MPERVRTVFV DEDAAPIVEQ GKPLKSNKKP SPETGERPSD NKENVSKKNK KRKRDQLADE
TRLHRTKKSN TSESQAAAVE QNENRKEDEA VNNSGEATIA KSLPKDQPEN QKHKRKKHSR
PFKDEENGRT ASLKKKAQML YEIRKNLPIF AHGDEIRQHL RKNDVMLLIG ETGSGKSTQI
PQFLVDESWC RPTKTTIVQE NGSKKEAVVG GCIAITQPRR VAAISLARRV AEEMGTPLGS
SSPASKVGYS VRFDTSVSPS TRVKFLTEGM LLQEMLHDPW LTKYSAIVVD EVHERGVNVD
LVMGFLRNLV SGKREGRGGV PLKAVVMSAT ADMESLQEFF VEGYKARELQ KEEKSEKDGI
AVCHIKGRQF PVKTIYSPEP VHDFVDAALK VIFQIHYKEP IPGDILVFLT GQETVEALEN
LVNEYATGMD PSLPKIQVLP LFAALPQAAQ QRVFVPAPPR TRKIILATNI AETSVTVSGV
RYVVDCGKAK IKQFRTRLGL DSLLVKPISK SAAIQRKGRA GREAPGQCYR LYTEKDYLAL
DEVNTPEILR CDLSQAILNM KARGVDNVIE FPFLTRPPRE ALEKALLQLL SIEALDETGK
ISETGSHIAK LPLTPTLGRV LLAASDFGPD CLTDVIDIIS CLSVENIFLN TTSEEKKEAA
EAARRDLYRR EGDHLTMLAT VRAYASENTD RKAWAERHLV SHRAMQSVMD VRKQLTAQCR
QAKLLPSPTE SRDSDSSSIR EPSPVFILKS FLRGFATNTA RLVPDGSYRT VVGNQTVAIH
PSSVLFGKKV EAILYNEFVF TNRSYARGVS AVQMDWVGEA LAGE
|
|---|
| |