Gene ANIA_05878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagANIA_05878 
Symbol 
ID
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameAspergillus nidulans FGSC A4 
KingdomEukaryota 
Replicon accessionBN001301 
Strand
Start bp1932873 
End bp1934449 
Gene Length1577 bp 
Protein Length421 aa 
Translation table 
GC content52% 
IMG OID 
Productperoxisomal 3-ketoacyl-coA thiolase (Kat1), putative (AFU_orthologue; AFUA_2G11350) 
Protein accessionCBF70650 
Protein GI259479956 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.397296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTGACAATGT CATCACCCCA GCAGCGACTC TCTTCTATTT CAAACCAGCT CTCGGGCTCG 
AGTGCTGCCG CCTCCAGGGA GAAACTGTTG GCCAAGAACC CTGACGATGT GGTATGTTTA
CTTCGTATTA TGGGAGAATT CTATGTCTCA CGCTTTGGGG GCAGGTAATC ACGCTCGCTG
TTCGAACGCC GCTCACCAAG GCGAGAAAGG GTGGTCTCAA GGACACTCGT CTTGATGACC
TGCTTATCTC GTTACTGACG GTATGTTGGG AAATCTCGCA CCCGCCAGGT CTGCTTGTAT
AGTCTAATGG GTGGAATAGA GTGTGCGTGA AAGGTCCAAG CTGGATCCGA ATCTCGTCGA
AGATGTCTGC GTCGGCAACA CTCTCTGCCC TGGCCAGGCA TATGTTGCGC GCTCTGCCGT
GCTCGCAGCA GGATTCCCTA TAACAACCGC TGCATCAGTT GCCAACCGTT TCTGCTCTTC
TGGATTGCTG GCGATTCAGA ACATCGCAAA CCAGATCATT GCCGGCTCAA TTGATATCGG
AATTGCAGTA GGTGCTGAGA GCATGAGCAC CAATGCCGAC GGTGGCGCAC CGGACCTGTC
CGAGGCGATC TTGTCGCACC CCATCGCGTC GCAAAACACG CAACCCATGG GCCAGACATC
CGAGAATGTG GCCGGTCAGT TCGGTATCGC CCGCGAGCAG CACGATCAAT TCGCTGCCAA
AAGCTATCAG AAGGCGGAGC GTGCCCAGAA GGCGGGATGG TTCGAGGACG AGATCGTCCC
CGTCAAGACG CAGATCAAGG ACCCCAAGAC TGGCGAAATC AAATCCATCA TCGTTGATAG
GGATGACGGT ATCCGCTATG GCACAACAGC TGAGTCTCTG GGGAAGATTC GCTCTGCGTT
CCCTCAGTGG AAGCCAAGCA ACACTACTGG TGGAAATGCC AGTCAAATCA CTGATGGTGC
AGCGGCGCTT GTGCTCATGA AGCGATCTCG TGCACAGGAG CTTGGCCAGC CTATTCTAGG
CAAGTTTGCC GGAGCAACCG TTGTTGGTTT GGAACCCAGG ATCATGGGAA TTGGCCCTAC
CTATGCCATT CCCAAGATTC TCTCGAAGTT CGGTTTGACC AACAATGAAG TCGACATTTT
TGAAATCAAT GAGGCGTTTG CATCAATGGT ACATAGTCCC CTTGTTGTTG TGTGCGGGGG
AAACCACTAA TACTCGACAG GGCGTTTACT GCGTTCAGAA ACTTGGTTTG GATGAGGCTA
AGGTTAACCC TCGTGGTGGT GCTATGTAAG GCGTCAGCTC CCTGTAAGAA GATTGTTGGC
TGACTATTAT AGTGCCTTCG GTCATCCCCT CGGTGCCACA GGCGCTCGAC AGGTTGTGAC
TGCCCTATCC GAGTTGCGAC GAACGAACAA AAGGGTAGCC GTCACCTCCA TGTGTGTTGG
AACAGTAAGC ACTATCTTCT CAGAAATGCA TCAACCATTC ACTAACGGTC TCGTTGTAGG
GCATGGGTAT GGCTGGTATC TTTGTTTCCG AACATTAGCT GCATGATATG ATGTGTATAA
TTTGTATATA CCATACC
 
Protein sequence
MSSPQQRLSS ISNQLSGSSA AASREKLLAK NPDDVVITLA VRTPLTKARK GGLKDTRLDD 
LLISLLTSVR ERSKLDPNLV EDVCVGNTLC PGQAYVARSA VLAAGFPITT AASVANRFCS
SGLLAIQNIA NQIIAGSIDI GIAVGAESMS TNADGGAPDL SEAILSHPIA SQNTQPMGQT
SENVAGQFGI AREQHDQFAA KSYQKAERAQ KAGWFEDEIV PVKTQIKDPK TGEIKSIIVD
RDDGIRYGTT AESLGKIRSA FPQWKPSNTT GGNASQITDG AAALVLMKRS RAQELGQPIL
GKFAGATVVG LEPRIMGIGP TYAIPKILSK FGLTNNEVDI FEINEAFASM GVYCVQKLGL
DEAKVNPRGG AIAFGHPLGA TGARQVVTAL SELRRTNKRV AVTSMCVGTG MGMAGIFVSE
H