| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_05871 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aspergillus nidulans FGSC A4 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | BN001301 |
|---|
| Strand | - |
|---|
| Start bp | 1951994 |
|---|
| End bp | 1953766 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | rRNA processing protein Rrp8, putative (AFU_orthologue; AFUA_2G11450) |
|---|
| Protein accession | CBF70668 |
|---|
| Protein GI | 259479966 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTATTCAGAC GCCGGCATAT ACCAGACTTC TACAAAGTAC CCCCTCGAAC AGCTTACAGC
ATTTCGTGCT AGCCATGTTT GCAGTTCCGG GCTGGTCGGT TTCGGCATCT GCGCTCAAAA
AGCAGAGTGA GCCGCAACCC CAAACCAAAG CCAGTCAGTC CTCAAAGCCC GAGGCAGATT
CGAATGCGAA TGCGAAATCG AACAAGCGCA AACGAGATGA CAATGTCACC AAGAAGAATG
TCGATCTGAT GTATCGTCGA CACATTGAAG GATCGACAGC TCAGGCGAAA GCTACGAAGC
CCAACTCTGC AAAACCAAAG CCTGAGAAAA AGCCCTGGGA GCGCAAGAGG GAAGAAAAGA
ACGATGCCGC CAAGCGGGAT CAAGATAAGG ATCAGGCTGC AAAGGCGACT GAAACAGTGG
TAGCTGGAGC GGATGGTAGT GCAGAGGAGA AAAAGAGTGC CAAGAGGAGG AGAAAGAACA
AGAATAAGGG CTCCCAACAA CAGGCGGGAG AAGAAAACCA AGCGACTCCC AATGAAGCCC
CTACTGCTGA ATCGATACCC CTTGCACCCC CAACTACAAC AGCTGTCTTG ACACCTCTCC
AGCAGGCCAT GCGGCAGAAG TTAATCTCAT CCCGTTTCCG TCATTTGAAC GAAACCCTAT
ACACTACTCC GTCAACGCAG GCTCTCGAGC TGTTCACTTC AAACCCTGAA CTATTCGAGG
AATACCACGC CGGTTTCTCC CGTCAAGTCA AGGAATCATG GCCTTCCAAT CCCGTTGACG
GCTACATCAA TGCCATCCGT ACTCGAGGAG CCATCTCCCC TGCCCCAAAG AAGGGAAGCA
AGCCGGACCA AAAATCCCGA GGTCTGGCCT TACCGCGCCG GCCAAACGGT ACATGCACCA
TTGTCGACCT TGGCTGCGGT GACGCACAAC TCCACCGCGC TCTGCTCCCT TCCGCCAAGA
AGCTGAACTT GAAGCTCCAC AGCTTCGACC TACACGCTCC CAAAGATTCA CCCATTACTA
AAGCCGACAT TTCTGACCTA CCTTTGGAAG ATGGCTCGGC TGACATTGCG ATCTTCTGCC
TCAGCCTGAT GGGCACAAAC TGGGTTTCCT TTGTCGAAGA AGCGTGGCGC GTTCTCCGCA
GCGACGGTAA GGGTGAATGC TGGGTCAGCG AAGTAAAAAG TCGCTTTGGC AAAGTGCACC
GCAAGAAAGC CCAAATCGGC GCGAAACGGA CACTCACGAA AGCCGAAAAG AAGAAACTCA
AGAAGAAGCG CGCGGGTGAT GACGATGCCG GCTCGGATGT CGACGATGCG GAGATCTATG
CTGAAGATGC CCGTCCCGCA CAGGATGATG AGACTGATAT CTCTGCTTTT GTCGAGGTCT
TCAGGACACG CGGGTTTGTT CTGAAATCTG AGACTCTGGA TAAATCGAAC AAGATGTTCG
TAAAGATGGA GTTTGTAAAG GCGGGCGGTG CACCGACGAA GGGTAAACAT GTGTCTGCTT
CTGGGGCTCC TGGCTCTGGC AAGAAGAAGT TTATTGAGAA GACGGTGGCT GCGGATAATG
GGATGACTCC GGAGGAGGAA GCGGCTGTAC TGAAGCCCTG CGTCTATAAG ATTCGGTGAT
GAATGTTCAC TTTGACGAAA ACTATGTTTG AGTAATCCTC TATGATACCA GCATTAGTGT
ATATAGAAGT CGTATCTGCT CCACCGTTTC AAATCCTCGG GATTATAGCG AGCTACATTT
CATAAAGGAG AAGCAATGCT TCATGGTCAT GAG
|
|---|
| Protein sequence | MFAVPGWSVS ASALKKQSEP QPQTKASQSS KPEADSNANA KSNKRKRDDN VTKKNVDLMY
RRHIEGSTAQ AKATKPNSAK PKPEKKPWER KREEKNDAAK RDQDKDQAAK ATETVVAGAD
GSAEEKKTVL TPLQQAMRQK LISSRFRHLN ETLYTTPSTQ ALELFTSNPE LFEEYHAGFS
RQVKESWPSN PVDGYINAIR TRGAISPAPK KGSKPDQKSR GLALPRRPNG TCTIVDLGCG
DAQLHRALLP SAKKLNLKLH SFDLHAPKDS PITKADISDL PLEDGSADIA IFCLSLMGTN
WVSFVEEAWR VLRSDGKGEC WVSEVKSRFG KTDISAFVEV FRTRGFVLKS ETLDKSNKMF
VKMEFVKAGG APTKGKHVSA SGAPGSGKKK FIEKTVAADN GMTPEEEAAV LKPCVYKIR
|
|---|
| |