Gene ANIA_05827 details

Gene Information

• Locus tag: ANIA_05827
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aspergillus nidulans FGSC A4
• Kingdom: Eukaryota
• Replicon accession: BN001301
• Strand: -
• Start bp: 2123274
• End bp: 2126660
• Gene Length: 3387 bp
• Protein Length: 1128 aa
• GC content: 52%
• Product: mRNA splicing factor RNA helicase (Cdc28), putative (AFU_orthologue; AFUA_2G07710)
• Protein accession: CBF70766
• Protein GI: 259480018

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 39
• Fosmid unclonability p-value: 0.900406
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGACAACC GTACATTTGT CTCCGATTCT CTCCTTCGCT TGGCGAACGC GTCGGATCCT 
ACTGTCGTCG ACTTCATCCT CGCCACCGCG ACATCCGCCA AATCGTCCTC TTCGCTCCAA 
GATAAGATAG CACCTTTTCT GGATGCAGGT GCAGAAGAGG TTAGCTCATT TTGTTCGGAA 
CTCTATAAAC GGGTTGGGAA GTCTGAAACG AGCGCAATTA CTAATGCTGG GACCGGGAGC 
GGGAATCGAG ATGGGAAAAC AGTTGCGGCG GGGACAGAGA AGAAGAAATA TCGCCTTCTG 
GATATGGATG AGGTCGATTA TGAGGGTGTA AGTGGGACTG GGAGTTCGCT AGGGCCTAGG 
AGTGTTGAGA CCGAGAGGAA AGACAGGGGG AGGAGGGCGC ACGACAAGAG TCGGGATGGA 
GATGGGAATA GTAAGAGTCA CAGTGATCGT TGGGATAAGA ACGAGAATCG GAAGAGGGAA 
CGCGAAAATA GCCGCGACCG GCGTCGATCG AAGAAGTTAA GACGGCGCGA CGTTGACGAC 
TTCGAAGATA GGTGGGGCGA TGAGGAGATT CTGGAGGAGG AAGAGCAGGA TGTTGAAGGG 
GAGTTTGCGG AGTCACCATC AAAGAGAGCG AGGCTGGAAG ATGGGTCCGC GTCGCCGCGT 
TCTAGGGCGA GTTCGGCCGA TTTGGATCCC GAAGAACGAA AAGAGCGCGA GCGAAAACGA 
GATCTCGAGG AGCGTGATGC ATTAGCGAAG CGGCTAGCGA GCAAAGACGA CAAACGGTCG 
AAAAAAATTG TGGAGGACCG AACTAAGGAT AGTGAGGCTG CAAGGCGACG AGCATTGGCA 
GATGACGCCA AAGCCAGGGA TGCCGCTATG CCAGACCTTA GATTGCGGTC AAGACAGGAG 
TATCTCAAGA AACGAGAGAC AGAACGGCTA GCTCTGCTGA GAAGACAGGT TGCGGAAGAG 
ACGCAGGAAT TGCGCGAGAA CCCGAACCTG ACGCGGAGGG AGAAAGAAGA GTTTGCGCGC 
AATCGTGAGG TATTGCGCAT CGCCGAGGAA CGACTACGCA TTGACGACCA TCGTGACGGC 
TATATGATGC CAGAGGACTA TATTACGGAG AAGGGGAAGA TTGATCGGAA GAAGAAGGAA 
GATGCTCTCT ACAAGCGGTA TGTGGAGCGT GATGAACTCG GCCAGGAGAA ATTCATCACG 
GAGCATGAGG AATGGGAAAT GGAACAAACT GCGAAGGCCA AAGCCCAGAT CAACCGAGCT 
GAGTTTGTAG ATGAAGGCGA TTACGAGTAT GTCTTTGATG ATACGCAAAG GATCAATTTT 
ACCATGGACG CACAGATGAA GGGTACGCGC AAGCTCATGA CCCAGGAACA GCGCATGTTA 
CAAGAAAAGC TCGACCAGGC GGAGCAGAAG GCACAGACTA TTGAAGACAC CCGCAAAAAG 
CTACCAATAT ACCAGTTTCG TGATCAAATC ATCCAAGCGG TTCACGATCA CCAGGTGCTG 
ATCATCGTTG GAGAAACCGG CTCTGGAAAG ACGACACAAC TTCCGCAGTA CCTCCATGAA 
GCAGGATATA CCAAGAACGG GATGAAGGTT GGATGCACGC AGCCACGACG GGTCGCAGCT 
ATGAGCGTGG CCGCACGCGT TGCAGAAGAA ATGGGTGTTA AGTTAGGCAA CGAGGTTGGG 
TACTCTATTC GATTTGAAGA CAACACAAGC GACAAAACTG TGCTCAAATA CATGACCGAC 
GGCATGCTGC TGCGTGAGCT CCTTACGGAG CCGGACTTGG GACAGTATTC GGCCCTGATG 
ATTGATGAAG CACACGAACG TACGGTTCCG ACAGATATTG CTTGTGGCCT CTTAAAGGAT 
ATTGCGAAGG CACGCCCGGA TTTGAAGTTG CTGATCTCTT CTGCAACTAT GGATGCGCAG 
AAGTTCCAAA GTTATTTTGA CAATGCGCCG ATTTTCAATA TTCCCGGGCG CATGTATAAT 
GTCGATATCC ACTACACGCA GCAACCGGAA GCCAATTACC TTGCTGCCGC TATTACGACA 
GTCTTTCAGA TTCACGTTTC TCAAGGGCCG GGTGACATTC TCGTCTTCCT CACTGGCCAG 
GAAGAAATCG AGGCTGCCGA GCAGAGCTTA CAGGAAACTG CGAGGAAGCT GGGGAATAAG 
ATACCGGAAA TGATTATATG TCCAATCTAT GCCAATCTAC CGTCCGATCT GCAAGCCAAA 
ATCTTTGAGC CAACTCCCCC CAAGGCGCGG AAGGTGGTTC TGGCTACGAA TATTGCCGAA 
ACTAGTCTGA CGATCGATGG GATTGTTTAT GTGATTGATC CCGGCTTCGT CAAGGAGAAC 
GTCTTCAACC CTAGAACCGG CATGGAGAGT TTGGTAGTGA CTCCCTGCTC GCGAGCATCA 
GCAAACCAGC GAGCTGGGCG AGCCGGTCGA GTTGGTCCAG GAAAATGTTT CCGCTTGTAT 
ACGAAATGGG CGTATTACAA CGAACTGGAA GAGAGCACTA CTCCTGAGAT TCAGCGGACT 
AATTTAAGCA GTGTAATACT TATGTTAAAG TCTTTGGGAA TTGACCAGCT CCTTGAATTC 
GACTTTATGG ATCCTCCACC GGCGGAGACC ATTATTAGAG CATTGGAGCA GCTATATGCG 
CTAGGAGCGC TGAACGACCG CGGAGAGCTT ACCAAGATTG GGCGGCAGAT GGCTGAATTC 
CCAACAGACC CAATGCTTGC CAAGGCAATC TTGGCTGCCG ACAAACACGG CTGCGTGGAA 
GAGGTTCTCT CAATCGTCTC AATGCTCGGT GAAGCCAGTG CACTCTTCTT CCGACCAAAG 
GACAAGAAGA TTCATGCAGA CAGCGCGCGC AATCGCTTTA CCGTCAAAGA TGGCGGTGAC 
CACCTTACCC TCCTCAACAT CTGGAACCAG TGGGTGGACT CTGACTTCAG CTACGTTTGG 
GCGAAAGAAA ACTTTCTTCA GCAGCGCAGT CTTACTCGAG CACGCGACGT GCGCGATCAA 
CTCGCGAAAC TCTGTGATCG CGTCGAGGTA ACCGTCAGCT CTTGTGGCTC AAACAACATC 
GTACCGATCC AGAAAGCCAT TACTGCCGGG TTCTTCCCGA ACGCAGCGCG TCTCCAGCGC 
GGCGGTGACA GCTACCGCAC CATTAAGACA GGGCAGACGG TATACCTGCA CCCGTCAAGT 
ACGCTCTTCG AGGTGAACCC GCGGTGGGTG ATCTACTTCG AGCTGGTTCT CACAAGCAAG 
GAATACATGC GCAGCAACAT GCCTCTGCAA GCGGAATGGC TTGTTGAGGT TGCACCGCAT 
TACTATAAGA AGAAGGACCT TGAGACGCTC GGCACAGAGA AGAAGCCGAA GGGGCAGGGG 
GCAGTAGGGG GAAAGAGTCG TGATTGA 

 

Protein sequence

MDNRTFVSDS LLRLANASDP TVVDFILATA TSAKSSSSLQ DKIAPFLDAG AEEVSSFCSE 
LYKRVGKSET SAITNAGTGS GNRDGKTVAA GTEKKKYRLL DMDEVDYEGV SGTGSSLGPR 
SVETERKDRG RRAHDKSRDG DGNSKSHSDR WDKNENRKRE RENSRDRRRS KKLRRRDVDD 
FEDRWGDEEI LEEEEQDVEG EFAESPSKRA RLEDGSASPR SRASSADLDP EERKERERKR 
DLEERDALAK RLASKDDKRS KKIVEDRTKD SEAARRRALA DDAKARDAAM PDLRLRSRQE 
YLKKRETERL ALLRRQVAEE TQELRENPNL TRREKEEFAR NREVLRIAEE RLRIDDHRDG 
YMMPEDYITE KGKIDRKKKE DALYKRYVER DELGQEKFIT EHEEWEMEQT AKAKAQINRA 
EFVDEGDYEY VFDDTQRINF TMDAQMKGTR KLMTQEQRML QEKLDQAEQK AQTIEDTRKK 
LPIYQFRDQI IQAVHDHQVL IIVGETGSGK TTQLPQYLHE AGYTKNGMKV GCTQPRRVAA 
MSVAARVAEE MGVKLGNEVG YSIRFEDNTS DKTVLKYMTD GMLLRELLTE PDLGQYSALM 
IDEAHERTVP TDIACGLLKD IAKARPDLKL LISSATMDAQ KFQSYFDNAP IFNIPGRMYN 
VDIHYTQQPE ANYLAAAITT VFQIHVSQGP GDILVFLTGQ EEIEAAEQSL QETARKLGNK 
IPEMIICPIY ANLPSDLQAK IFEPTPPKAR KVVLATNIAE TSLTIDGIVY VIDPGFVKEN 
VFNPRTGMES LVVTPCSRAS ANQRAGRAGR VGPGKCFRLY TKWAYYNELE ESTTPEIQRT 
NLSSVILMLK SLGIDQLLEF DFMDPPPAET IIRALEQLYA LGALNDRGEL TKIGRQMAEF 
PTDPMLAKAI LAADKHGCVE EVLSIVSMLG EASALFFRPK DKKIHADSAR NRFTVKDGGD 
HLTLLNIWNQ WVDSDFSYVW AKENFLQQRS LTRARDVRDQ LAKLCDRVEV TVSSCGSNNI 
VPIQKAITAG FFPNAARLQR GGDSYRTIKT GQTVYLHPSS TLFEVNPRWV IYFELVLTSK 
EYMRSNMPLQ AEWLVEVAPH YYKKKDLETL GTEKKPKGQG AVGGKSRD