| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | plpl0020 |
|---|
| Symbol | |
|---|
| ID | 3115664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Legionella pneumophila str. Lens |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006366 |
|---|
| Strand | + |
|---|
| Start bp | 16862 |
|---|
| End bp | 19459 |
|---|
| Gene Length | 2598 bp |
|---|
| Protein Length | 865 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637578663 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_122313 |
|---|
| Protein GI | 54292926 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
|---|
| TIGRFAM ID | [TIGR02746] type-IV secretion system protein TraC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTAA ATTTCTCTCT TTGGCGCGAT AAAGCGCGAG ATTTATTGCA TCGTACAAGT
CATCTACTTG GAGAAACTTC AGGAGTGAAA CCTGATTCTC TTTGCTCCTA TGATAAAGCA
TATGAGTCGT GTACTTTAGA TTTGCCCTCT ATCAAAAGCC TTTTACCCTA TGAAACGGTG
AATGAAGCCG GTTTTTTTGT GAATCGCAAC TCAATGGGCT TTGGCTTGTT GTTAATGCCC
ATGTCGGGTG CGGATGAGTC CTTAATGAAC AGCCTGTCGC AACTGTTTAA AAATAAATTA
ACTGTAGGGA CGGATTGCAC GGTGTTGTTG TATAAACACC CATGGATTGG AGAACAACTT
GCGCAAAACT ATGAGCCTAT TTTAAAACAA GGTGGTATTT ATGCTGAGCT TGCACGGGAG
ACGCTGAAAT ACCATCTGAA TGCCATTAAA AAAGGATATA AAAATGGCCG TAATGTGCCG
GCGGGCTTAA GTGATTATTG TGGTTATCTT TTTGTTTCAA GACCGATGCA ATCTGATGTG
GAAGGGCAGC TCCAACTGTT GCTAGCCGAC TTTGAATCCG AACTTAAAGT CGCGGGTTTT
GGAATTAGGC GGTGTGGGGA AGATGAATTT AAGGTGCTGA TGCGCGCATT AATTTCGCCT
GATTTCAATG AGTTGTCCTG GCCAATCATT AATGAATCAG ATGGGTTTAT TGCAGAAGCT
ATACCCTGTC CCTCAACCGT GATTGAAATT GGAGATGAGG CTATCGAGGT ATCAATTACT
GACTCTCAAG CACAAACAGT GCGAACTCGA CTGGTTAATT GTGAGGTGAG TCACTACCCA
GCCAAGCCAT TTGCTTTATG GCAAACACCG GATTTATTTG CCAACTTGCT TGATACTGAG
CAGGGGATCC AATGTCCTTT TTTAATTTCA TTCACCATTC GAGGTATGAA TCAGGAAAAG
ATGAAGGCGA AAGCACGTGC TCGTGCCAAA TCCTTAAACG CGAATAATAA TCCCGTTCAA
TCCTTTATTA ACCCATCCAT TCGTGAGGAA GCAGCCGAGT GGCAATTTGT GCACGATCAT
GCATCAAAAG GCGAATTGCA CCTTTTACCT ACCTTTTATA ATGTCATTCT TTATACAACT
GGCGACCACG AACGTGAGCA TGTTGCCAAG GCAATTGCAA GTTTTAGGCA AATGGGTTTT
ACATTAACTC AGAGCCGTTG CAAACAATGG TTAAGATTTT TAGGTTCCCT TCCTTTTATA
TGTACTTCCG GCCTTTTTTC GAGTCTTGAG CTCTTGGGCA TGACCAAAAA ACTGAGTCAC
GCCAATGTTG CTAATCTTCT GCCGGTCATT GCTGATTTTA AAGGAGCAAG ACAGGGGCTC
ATTGTACCTA CGTATCGCCA TCAACTGTTT TATTTAAATA CCTTTGATGA CAGGGTTTTG
CCCATAACTA ATTTTAATCG ACTCACAGTG GCTTCCACAG GAGCTGGTAA ATCTTTCTTT
GAGCAAGCAC AAATTTTGGA TGGTTTATCG CGAGGCCAAC AAATTTTCGT CATTGATTTA
GGCGGCTCTT ACAAGCATTT ATGCGAGATG GTTGGTGGCA GCTACATTGA TGCCTCCACT
TTGACGCTTA ATCCATTTAC GCTGTTTGAT TTTGATGGGG TCACCGAGAT TAAAGGGGAA
CAAGTCAACG ATTACATTCA AATCAGAGAT TTGTTAGCAA TCATGGCAAG CCCGTCAGAG
GCATTAGGGG AAGTTCAAAA AGCATGGCTT TTAGATGCTG TGACTGAATG CTGGAAAGCG
CGGGGCCGTC ACGCAAAAAT GGATGATGTT TTAACCTCAC TTCAAAGGAT GCTAGAAAAA
CCTCAATCCC AAGGTGACCA ACGGCTTAAG GATTTGCTGA TTTTGATGAG TAAATATGGA
AGTCAGGGCA TTTACGGCCA CCTCTTTAAC AGCGATACAC CTCTACTCAA TGGTTCCAAT
TTGGTGGTTC TTGAAATGGG TGAGCTGGAA TCTAACCCTG AACTGCTCAC CATTGTCATG
TTTGTCATGA TCGTGATTAT CCAGGGGCAA TTTTATCACT CGGATAGAAG GCGCGAAAAA
CGATGTATCA TTGATGAAGC CTGGCGTTTT TTGGCTCGTG GTTCTAATCC AGTGTGTGCC
AGCTTTATCG AGCAGGGCTT TCGTACTGCA AGAAAGCATA TGGGTGGTTT TGCAGTCATC
ACACAAAACC TTTTAGACAC CATGAACACT ATTCAGGGAC GTGCTATTGC GGCAAGTAGT
GATACTAAAA TCATTATGCG CCAGGGTTCG TTTAAGCAAT ACCTAGAGGA ACATCCAAAG
CATTTTAGTC CGCTTGAAGC ACGTGTCATC GAATCTTTTG GTGAGGCAAA AACTCAAGGG
TTTTCCAATC TGATGATTCA GTTTGGAAAT GTCACCACGT TTCATCGTTA TTTTTGCGAT
CCCTTTTCCC GCGTGCTGTT TTCAACCTCA GGGGATGAAG TAAGTCTCAT TGAGTCGTTA
ACCAAACAAG GGGTCAGCTT AAGTGAGGCA ATAAAACGCG TTGCAAACAA ATATTATGGG
GAGGAATTAT GCGATTAA
|
|---|
| Protein sequence | MGVNFSLWRD KARDLLHRTS HLLGETSGVK PDSLCSYDKA YESCTLDLPS IKSLLPYETV
NEAGFFVNRN SMGFGLLLMP MSGADESLMN SLSQLFKNKL TVGTDCTVLL YKHPWIGEQL
AQNYEPILKQ GGIYAELARE TLKYHLNAIK KGYKNGRNVP AGLSDYCGYL FVSRPMQSDV
EGQLQLLLAD FESELKVAGF GIRRCGEDEF KVLMRALISP DFNELSWPII NESDGFIAEA
IPCPSTVIEI GDEAIEVSIT DSQAQTVRTR LVNCEVSHYP AKPFALWQTP DLFANLLDTE
QGIQCPFLIS FTIRGMNQEK MKAKARARAK SLNANNNPVQ SFINPSIREE AAEWQFVHDH
ASKGELHLLP TFYNVILYTT GDHEREHVAK AIASFRQMGF TLTQSRCKQW LRFLGSLPFI
CTSGLFSSLE LLGMTKKLSH ANVANLLPVI ADFKGARQGL IVPTYRHQLF YLNTFDDRVL
PITNFNRLTV ASTGAGKSFF EQAQILDGLS RGQQIFVIDL GGSYKHLCEM VGGSYIDAST
LTLNPFTLFD FDGVTEIKGE QVNDYIQIRD LLAIMASPSE ALGEVQKAWL LDAVTECWKA
RGRHAKMDDV LTSLQRMLEK PQSQGDQRLK DLLILMSKYG SQGIYGHLFN SDTPLLNGSN
LVVLEMGELE SNPELLTIVM FVMIVIIQGQ FYHSDRRREK RCIIDEAWRF LARGSNPVCA
SFIEQGFRTA RKHMGGFAVI TQNLLDTMNT IQGRAIAASS DTKIIMRQGS FKQYLEEHPK
HFSPLEARVI ESFGEAKTQG FSNLMIQFGN VTTFHRYFCD PFSRVLFSTS GDEVSLIESL
TKQGVSLSEA IKRVANKYYG EELCD
|
|---|
| |