Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | pE33L466_0056 |
Symbol | |
ID | 3400004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus E33L |
Kingdom | Bacteria |
Replicon accession | NC_007103 |
Strand | - |
Start bp | 53248 |
End bp | 54420 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637659895 |
Product | integrase-recombinase |
Protein accession | YP_245559 |
Protein GI | 67077939 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0611528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAATA ACAATACAAA TGAAAATTTA TCTATTATAA ACAATCAAAG TGATTTTATT GATATATATG TAGAGTATAT AAGAGATATC GTTCCATTTC TGCATAACAA TGGTTATGTA GATAAGGTGG AAGAGAAGAT GGAGGTTGCA GAAAAAGAGG GCAAGAGTAA ATATACGTAT TTAAGTGACC TAGAAGTCAT TTATCATTTC GTACATTTAC AAAAGGATAT GGATGAGAAG AAAAATAGAA AAGAGGATAC GAAAAAGAGT TATATATCGG AAATCTTGTC GTTTTGTCAG TGCATGGTGC AGCATGCAGA AGCGTTCGAA TTAGATGGGG AAGAAGTACA GAAAAAGGAC TCTTTATTGA AAACCTTACA ACCTTGGCAC ATACGTAAAT ATAACTCCTG GTTGAAACAA GTTGAAAACG GTAGAAATGG TGAAACATAT GCAGTCGCAA CACTTGCAAA GAAAACAGTG CTCATTCGTT CTTTTCTAAA GCACCTTCAT GTATTTTCTT ATATTGAAAA ACCTCTTCAT GAAGAACTTC AGCGTGCAAA TGTAAATGAA CAAGATCGGC CAAATCGGGA CCTATCGTAT GATGAAGTTA TGAAAATTTT AGGGTTTTAT AAAGAAAGAG GACATTTAGT AAACTATACA ATTTTATTAG CCTTGGCAAG TACTGGTGCA AGAATTCAAG AATTGTGCAC CGCGAGAGTG AAAAATTTAC ATTATGACGG AAAGTACTGG TTAAAAGTCA CTGGAAAAGG GGATAAAGTG CGTCAACTTT TCATTTCGGA ACATTTATTC CAGTGTATTT GTGAAATGAG ACGGAGAAGA GGGTTCCAAA CTGTATTGGA TCGAGGAGAT GAAAGTCCTT TATTTGTAAA CCAAAGGGGT AACTCTTATA ATTCAAAAAC ATTATCAAAT CAGGTAACAG ATATGATAAA AAAGACAAAC TTAGAGTTTC TACTGTATCG TGAAAATCCA GTAACGGCGC ATACATTCCG TCATGCTTTT GCTATTATGG CAGTGGAGCA GGGAAATGCT GATTTGTATC ATTTAATGCA AACACTTGGT CATGAAGATA TTCAAACAAC GAAGATTTAT TTAGAGAAGC ATATGAAGCG GAAGAATAAT GTGGGAACTA CATTTGCAGA TATGTTGAAT TAA
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Protein sequence | MDNNNTNENL SIINNQSDFI DIYVEYIRDI VPFLHNNGYV DKVEEKMEVA EKEGKSKYTY LSDLEVIYHF VHLQKDMDEK KNRKEDTKKS YISEILSFCQ CMVQHAEAFE LDGEEVQKKD SLLKTLQPWH IRKYNSWLKQ VENGRNGETY AVATLAKKTV LIRSFLKHLH VFSYIEKPLH EELQRANVNE QDRPNRDLSY DEVMKILGFY KERGHLVNYT ILLALASTGA RIQELCTARV KNLHYDGKYW LKVTGKGDKV RQLFISEHLF QCICEMRRRR GFQTVLDRGD ESPLFVNQRG NSYNSKTLSN QVTDMIKKTN LEFLLYRENP VTAHTFRHAF AIMAVEQGNA DLYHLMQTLG HEDIQTTKIY LEKHMKRKNN VGTTFADMLN
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