| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | pE33L466_0027 |
|---|
| Symbol | oppC |
|---|
| ID | 3399989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus E33L |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007103 |
|---|
| Strand | + |
|---|
| Start bp | 25104 |
|---|
| End bp | 26045 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 637659872 |
|---|
| Product | oligopeptide transport system permease |
|---|
| Protein accession | YP_245536 |
|---|
| Protein GI | 67077916 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00373339 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAGAA AATTATATAA AAACAAACAA TTCTTAATAG GATTTTTAAT TTTATTCAGC
ATTATTATCG CTAGCTATGT TTTTGAATAT TTCATTGAAT TTACTTCTAA AGATTTTAAT
ATTCAATCTA AACCAACCTC CCCCTCTTTA ACACACCCAT TAGGTACTGG GGAATATGGA
GTTGATGTTT TACAACAAGT TCTTATTTTT GCAAAAACAC CAATTTTTTT TGCTTTAATC
ATCTGTATTT TTCGACTTAC TTTTTCACTT TTATTTGGAG TATTACATGC TTATTTTTAT
ACTTGGACAA AATATATTAA TTGGGTGTTT GATATTTTCC AATTTACACC TACTGTATTG
TTAGCTATTT TACTAATTCG TCCTACAATT TCAGGTATGG ATAATATCCA TGAAACTAAA
TGGATATGTT ATACAATTGT AGTTCTTACT CTTATTGGCA TACCAAATTT GACACAACTC
ATTAGCAATG AAGTTAGATT ACTTCTACAA CGAGAATACG TTTTAACATC CAAGCTACTT
GGTGGACATA CTTATCACAT ATATAAAGTT CATATTAAGC CCTATTTACT TCCCAAATTA
TTTATTTGGT TCCAACAACA AATACTACAA ATAATGATAT TAATGATGCA TTTAGCATTA
TTCGAAACAA TTTCCTTAAA TGTTGGAGGC AGCCTTTTAT TAATTAATGA CACAAGTCAA
AAGCTAATAA ATTATCCTTG GTTAGCGATG GGGCCTGTTA TTTTCTTTAC CATTGTTATT
TTATCTATTA ATGCTTTACT ATCAGGTTTA CAAAGCACTC TAAAAGGCGA TGATGCATTT
CACGAATCTT CTCTTCTACT AAATAAAATA GAGCAAGTAA AACATGAAAA ATGGGAGATA
CATTTACAAC AATTTAAACA ATGGTTTTCA ATAAAATTAT AA
|
|---|
| Protein sequence | MIRKLYKNKQ FLIGFLILFS IIIASYVFEY FIEFTSKDFN IQSKPTSPSL THPLGTGEYG
VDVLQQVLIF AKTPIFFALI ICIFRLTFSL LFGVLHAYFY TWTKYINWVF DIFQFTPTVL
LAILLIRPTI SGMDNIHETK WICYTIVVLT LIGIPNLTQL ISNEVRLLLQ REYVLTSKLL
GGHTYHIYKV HIKPYLLPKL FIWFQQQILQ IMILMMHLAL FETISLNVGG SLLLINDTSQ
KLINYPWLAM GPVIFFTIVI LSINALLSGL QSTLKGDDAF HESSLLLNKI EQVKHEKWEI
HLQQFKQWFS IKL
|
|---|
| |